RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 SPATA31A3Q5VYP0 1347 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 TULP4Q9NRJ4 1543 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 K7ELQ4 463 aaPredicted RBP9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 HIP1O00291 1037 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 IGHMBP2P38935 993 aaKnown RBP9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 GNL2Q13823 731 aaKnown RBP9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 ZNF790Q6PG37 636 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 MRPL50Q8N5N7 158 aaKnown RBP9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 XAGE3Q8WTP9 111 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 KIF3AQ9Y496 699 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 WASHC4Q2M389 1173 aa9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 CWC25Q9NXE8 425 aaPredicted RBP9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 EXOC6BQ9Y2D4 811 aa9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 KDM2BQ8NHM5 1336 aa9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 RAB11FIP3O75154 756 aa9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 NASPP49321 788 aaPredicted RBP9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 RABEP1Q15276 862 aa9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 KSR2Q6VAB6 950 aa9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 LRRFIP2Q9Y608 721 aaKnown RBP9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 BLMP54132 1417 aaPredicted RBP9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 FBXW7Q969H0 707 aa9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 LGR6Q9HBX8 967 aa9.25□□□□□ -0.93
CACNA1D-220ENST00000636999 TRDNQ13061 729 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 CHAF1AQ13111 956 aaPredicted RBP9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 HSP90AA2PQ14568 343 aaPredicted RBP9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 SLC52A2Q9HAB3 445 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 IGSF1Q8N6C5 1336 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 NRXN1Q9ULB1 1477 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 ATP5J2-PTCD1G3V325 749 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 PRPF40AO75400 957 aaKnown RBP9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 ALDH1L1O75891 902 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 GPTP24298 496 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 IFIT5Q13325 482 aaKnown RBP9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 KRT24Q2M2I5 525 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 AACSQ86V21 672 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 RNF214Q8ND24 703 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 CCDC85AQ96PX6 553 aaPredicted RBP9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 DNAJC2Q99543 621 aaKnown RBP9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 CARD10Q9BWT7 1032 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 IL1RAPL2Q9NP60 686 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 FAM98CQ17RN3 349 aaKnown RBP9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 TTC39AQ5SRH9 613 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 FAM43AQ8N2R8 423 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 DDX21Q9NR30 783 aaKnown RBP eCLIP9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 NEURL4Q96JN8 1562 aa9.24□□□□□ -0.93
CACNA1D-220ENST00000636999 ERBB3P21860 1342 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 PPP1R42Q7Z4L9 355 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 QRICH2Q9H0J4 1663 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 SMARCA5O60264 1052 aaPredicted RBP9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 RFC4P35249 363 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 UBE3BQ7Z3V4 1068 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 GRPEL1Q9HAV7 217 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 FER1L4A9Z1Z3 1794 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 ERVV-2B6SEH9 535 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 PHF14O94880 888 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 LINS1Q8NG48 757 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 BCL11BQ9C0K0 894 aaPredicted RBP9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 AKAP2Q9Y2D5 859 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 WDR17Q8IZU2 1322 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 BCORL1Q5H9F3 1711 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 KIAA1210Q9ULL0 1709 aa9.23□□□□□ -0.93
CACNA1D-220ENST00000636999 MROH1Q8NDA8 1641 aa9.22□□□□□ -0.93
CACNA1D-220ENST00000636999 METTL24Q5JXM2 366 aa9.22□□□□□ -0.93
CACNA1D-220ENST00000636999 CDK12Q9NYV4 1490 aaPredicted RBP9.22□□□□□ -0.93
CACNA1D-220ENST00000636999 TECPR2O15040 1411 aa9.22□□□□□ -0.93
CACNA1D-220ENST00000636999 PHKG2P15735 406 aa9.22□□□□□ -0.93
CACNA1D-220ENST00000636999 CPLX2Q6PUV4 134 aaKnown RBP9.22□□□□□ -0.93
CACNA1D-220ENST00000636999 SYNE3Q6ZMZ3 975 aa9.22□□□□□ -0.93
CACNA1D-220ENST00000636999 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.22□□□□□ -0.93
CACNA1D-220ENST00000636999 PPP1R1BQ9UD71 204 aaPredicted RBP9.22□□□□□ -0.93
CACNA1D-220ENST00000636999 TMEM131LA2VDJ0 1609 aa9.22□□□□□ -0.93
CACNA1D-220ENST00000636999 CDC42BPGQ6DT37 1551 aa9.21□□□□□ -0.93
CACNA1D-220ENST00000636999 ANKRD18BA2A2Z9 1011 aa9.21□□□□□ -0.93
CACNA1D-220ENST00000636999 PLEKHF1Q96S99 279 aa9.21□□□□□ -0.93
CACNA1D-220ENST00000636999 C1orf167Q5SNV9 1468 aa9.21□□□□□ -0.93
CACNA1D-220ENST00000636999 PRIM1P49642 420 aaKnown RBP9.21□□□□□ -0.94
CACNA1D-220ENST00000636999 IL17REQ8NFR9 667 aa9.21□□□□□ -0.94
CACNA1D-220ENST00000636999 VPS37CA5D8V6 355 aaPredicted RBP9.21□□□□□ -0.94
CACNA1D-220ENST00000636999 MEIS3Q99687 375 aa9.21□□□□□ -0.94
CACNA1D-220ENST00000636999 TRIM34Q9BYJ4 488 aa9.21□□□□□ -0.94
CACNA1D-220ENST00000636999 CIZ1Q9ULV3 898 aaPredicted RBP9.21□□□□□ -0.94
CACNA1D-220ENST00000636999 GRM8O00222 908 aa9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 GLRX3O76003 335 aaKnown RBP9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 HDAC1Q13547 482 aaPredicted RBP9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 CSPP1Q1MSJ5 1256 aa9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 USP31Q70CQ4 1352 aa9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 IFIT1P09914 478 aaKnown RBP9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 RALYLQ86SE5 291 aaKnown RBP9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 ATP6V1DQ9Y5K8 247 aa9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 MAP4K4O95819 1239 aaPredicted RBP9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 ZSCAN25Q6NSZ9 544 aa9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 TBC1D9Q6ZT07 1266 aa9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 DZIP3Q86Y13 1208 aaKnown RBP9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 TNPO1Q92973 898 aaKnown RBP9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 SMC3Q9UQE7 1217 aa9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 RTCBQ9Y3I0 505 aaKnown RBP9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 CPSF1Q10570 1443 aaKnown RBP9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 PIP4K2AP48426 406 aaPredicted RBP9.2□□□□□ -0.94
CACNA1D-220ENST00000636999 CDC5LQ99459 802 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms