RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 NARFQ9UHQ1 456 aa16.91■□□□□ 0.3
CTSD-208ENST00000636843 ZBTB1Q9Y2K1 713 aa16.91■□□□□ 0.3
CTSD-208ENST00000636843 KCPQ6ZWJ8 1503 aa16.9■□□□□ 0.3
CTSD-208ENST00000636843 COL15A1P39059 1388 aa16.9■□□□□ 0.3
CTSD-208ENST00000636843 C9orf131Q5VYM1 1079 aa16.9■□□□□ 0.3
CTSD-208ENST00000636843 ADAMTS7Q9UKP4 1686 aa16.9■□□□□ 0.3
CTSD-208ENST00000636843 BRCA1P38398 1863 aaKnown RBP16.9■□□□□ 0.3
CTSD-208ENST00000636843 STARD3NLO95772 234 aa16.89■□□□□ 0.29
CTSD-208ENST00000636843 CHRNA5P30532 468 aa16.89■□□□□ 0.29
CTSD-208ENST00000636843 NFIXQ14938 502 aa16.89■□□□□ 0.29
CTSD-208ENST00000636843 TTC5Q8N0Z6 440 aa16.89■□□□□ 0.29
CTSD-208ENST00000636843 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
CTSD-208ENST00000636843 U2SURPO15042 1029 aaKnown RBP16.88■□□□□ 0.29
CTSD-208ENST00000636843 TOMM70O94826 608 aa16.88■□□□□ 0.29
CTSD-208ENST00000636843 ARFGEF1Q9Y6D6 1849 aa16.87■□□□□ 0.29
CTSD-208ENST00000636843 GNAT3A8MTJ3 354 aa16.87■□□□□ 0.29
CTSD-208ENST00000636843 TEFQ10587 303 aa16.87■□□□□ 0.29
CTSD-208ENST00000636843 COL3A1P02461 1466 aaPredicted RBP16.87■□□□□ 0.29
CTSD-208ENST00000636843 IL17REQ8NFR9 667 aa16.86■□□□□ 0.29
CTSD-208ENST00000636843 YTHDC1Q96MU7 727 aaKnown RBP16.86■□□□□ 0.29
CTSD-208ENST00000636843 TEX13AQ9BXU3 409 aaPredicted RBP16.86■□□□□ 0.29
CTSD-208ENST00000636843 BCL2L12Q9HB09 334 aa16.86■□□□□ 0.29
CTSD-208ENST00000636843 A0A087WZG4 1122 aa16.86■□□□□ 0.29
CTSD-208ENST00000636843 SERPINB2P05120 415 aa16.86■□□□□ 0.29
CTSD-208ENST00000636843 CANXP27824 592 aaKnown RBP16.86■□□□□ 0.29
CTSD-208ENST00000636843 EIF5P55010 431 aaKnown RBP16.86■□□□□ 0.29
CTSD-208ENST00000636843 NMRK2Q9NPI5 230 aa16.86■□□□□ 0.29
CTSD-208ENST00000636843 APLP1P51693 650 aa16.85■□□□□ 0.29
CTSD-208ENST00000636843 CNGB1Q14028 1251 aaPredicted RBP16.85■□□□□ 0.29
CTSD-208ENST00000636843 ZNF790Q6PG37 636 aa16.85■□□□□ 0.29
CTSD-208ENST00000636843 RNF181Q9P0P0 153 aa16.85■□□□□ 0.29
CTSD-208ENST00000636843 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
CTSD-208ENST00000636843 KDM2BQ8NHM5 1336 aa16.84■□□□□ 0.29
CTSD-208ENST00000636843 ZNF496Q96IT1 587 aaPredicted RBP16.84■□□□□ 0.29
CTSD-208ENST00000636843 CFAP53Q96M91 514 aa16.84■□□□□ 0.29
CTSD-208ENST00000636843 HEG1Q9ULI3 1381 aa16.83■□□□□ 0.28
CTSD-208ENST00000636843 RBM46Q8TBY0 533 aaKnown RBP16.83■□□□□ 0.28
CTSD-208ENST00000636843 ANP32CO43423 234 aa16.82■□□□□ 0.28
CTSD-208ENST00000636843 C16orf71Q8IYS4 520 aaPredicted RBP16.82■□□□□ 0.28
CTSD-208ENST00000636843 TTLL6Q8N841 843 aa16.82■□□□□ 0.28
CTSD-208ENST00000636843 FMNL2Q96PY5 1086 aa16.82■□□□□ 0.28
CTSD-208ENST00000636843 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
CTSD-208ENST00000636843 NUDCQ9Y266 331 aa16.81■□□□□ 0.28
CTSD-208ENST00000636843 NRXN2Q9P2S2 1712 aa16.81■□□□□ 0.28
CTSD-208ENST00000636843 CEMIPQ8WUJ3 1361 aa16.81■□□□□ 0.28
CTSD-208ENST00000636843 ZC3H4Q9UPT8 1303 aaKnown RBP16.81■□□□□ 0.28
CTSD-208ENST00000636843 H0YIN7 160 aa16.8■□□□□ 0.28
CTSD-208ENST00000636843 CCER2I3L3R5 266 aa16.8■□□□□ 0.28
CTSD-208ENST00000636843 IL6STP40189 918 aaPredicted RBP16.8■□□□□ 0.28
CTSD-208ENST00000636843 C2CD5Q86YS7 1000 aa16.8■□□□□ 0.28
CTSD-208ENST00000636843 PRKAR2BP31323 418 aa16.8■□□□□ 0.28
CTSD-208ENST00000636843 IFFO2Q5TF58 517 aa16.8■□□□□ 0.28
CTSD-208ENST00000636843 BICDL1Q6ZP65 573 aa16.8■□□□□ 0.28
CTSD-208ENST00000636843 RSPH6AQ9H0K4 717 aa16.8■□□□□ 0.28
CTSD-208ENST00000636843 PDZRN3Q9UPQ7 1066 aa16.8■□□□□ 0.28
CTSD-208ENST00000636843 AFDNP55196 1824 aaKnown RBP16.79■□□□□ 0.28
CTSD-208ENST00000636843 LMNB1P20700 586 aa16.79■□□□□ 0.28
CTSD-208ENST00000636843 FSTL1Q12841 308 aa16.79■□□□□ 0.28
CTSD-208ENST00000636843 TBC1D9BQ66K14 1250 aa16.79■□□□□ 0.28
CTSD-208ENST00000636843 NPM2Q86SE8 214 aaKnown RBP16.79■□□□□ 0.28
CTSD-208ENST00000636843 PHACTR3Q96KR7 559 aa16.79■□□□□ 0.28
CTSD-208ENST00000636843 BTBD11A6QL63 1104 aa16.78■□□□□ 0.28
CTSD-208ENST00000636843 RASSF7Q02833 373 aa16.78■□□□□ 0.28
CTSD-208ENST00000636843 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
CTSD-208ENST00000636843 PDE6BP35913 854 aa16.77■□□□□ 0.28
CTSD-208ENST00000636843 BRIP1Q9BX63 1249 aa16.77■□□□□ 0.28
CTSD-208ENST00000636843 RRAGCQ9HB90 399 aa16.77■□□□□ 0.28
CTSD-208ENST00000636843 TBC1D2BQ9UPU7 963 aa16.77■□□□□ 0.28
CTSD-208ENST00000636843 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.27
CTSD-208ENST00000636843 A1BGP04217 495 aa16.76■□□□□ 0.27
CTSD-208ENST00000636843 DNAJC5GQ8N7S2 189 aa16.76■□□□□ 0.27
CTSD-208ENST00000636843 SIPA1L3O60292 1781 aaPredicted RBP16.76■□□□□ 0.27
CTSD-208ENST00000636843 U2AF1L5P0DN76 240 aaPredicted RBP16.75■□□□□ 0.27
CTSD-208ENST00000636843 U2AF1Q01081 240 aaKnown RBP eCLIP16.75■□□□□ 0.27
CTSD-208ENST00000636843 RTF1Q92541 710 aaKnown RBP16.75■□□□□ 0.27
CTSD-208ENST00000636843 SBF1O95248 1867 aa16.75■□□□□ 0.27
CTSD-208ENST00000636843 KCNQ3O43525 872 aa16.75■□□□□ 0.27
CTSD-208ENST00000636843 CAMTA2O94983 1202 aa16.75■□□□□ 0.27
CTSD-208ENST00000636843 PPP2R1AP30153 589 aa16.75■□□□□ 0.27
CTSD-208ENST00000636843 PRR5LQ6MZQ0 368 aa16.75■□□□□ 0.27
CTSD-208ENST00000636843 SETDB2Q96T68 719 aa16.75■□□□□ 0.27
CTSD-208ENST00000636843 GLTPD2A6NH11 291 aa16.74■□□□□ 0.27
CTSD-208ENST00000636843 ZNF622Q969S3 477 aaKnown RBP eCLIP16.74■□□□□ 0.27
CTSD-208ENST00000636843 DLEC1Q9Y238 1755 aa16.74■□□□□ 0.27
CTSD-208ENST00000636843 NFKBIEO00221 500 aa16.73■□□□□ 0.27
CTSD-208ENST00000636843 HTATSF1O43719 755 aaKnown RBP16.73■□□□□ 0.27
CTSD-208ENST00000636843 PRELPP51888 382 aa16.73■□□□□ 0.27
CTSD-208ENST00000636843 DZIP3Q86Y13 1208 aaKnown RBP16.73■□□□□ 0.27
CTSD-208ENST00000636843 USP16Q9Y5T5 823 aa16.73■□□□□ 0.27
CTSD-208ENST00000636843 NPHP1O15259 732 aa16.72■□□□□ 0.27
CTSD-208ENST00000636843 SNRPA1P09661 255 aaKnown RBP16.72■□□□□ 0.27
CTSD-208ENST00000636843 VEGFAP15692 232 aaPredicted RBP16.72■□□□□ 0.27
CTSD-208ENST00000636843 CNBD1Q8NA66 436 aa16.72■□□□□ 0.27
CTSD-208ENST00000636843 SMC1BQ8NDV3 1235 aa16.72■□□□□ 0.27
CTSD-208ENST00000636843 SCN7AQ01118 1682 aa16.72■□□□□ 0.27
CTSD-208ENST00000636843 ST5P78524 1137 aa16.71■□□□□ 0.27
CTSD-208ENST00000636843 CLEC4GQ6UXB4 293 aa16.71■□□□□ 0.27
CTSD-208ENST00000636843 MCM10Q7L590 875 aa16.71■□□□□ 0.27
CTSD-208ENST00000636843 TNRC6CQ9HCJ0 1690 aaKnown RBP16.71■□□□□ 0.27
CTSD-208ENST00000636843 CCDC24Q8N4L8 307 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms