RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 MCM10Q7L590 875 aa19.96■□□□□ 0.79
CACNA1A-230ENST00000636768 TEX13AQ9BXU3 409 aaPredicted RBP19.96■□□□□ 0.79
CACNA1A-230ENST00000636768 CHD4Q14839 1912 aa19.96■□□□□ 0.79
CACNA1A-230ENST00000636768 DDR1Q08345 913 aa19.95■□□□□ 0.78
CACNA1A-230ENST00000636768 NARFQ9UHQ1 456 aa19.95■□□□□ 0.78
CACNA1A-230ENST00000636768 VIRMAQ69YN4 1812 aaKnown RBP19.95■□□□□ 0.78
CACNA1A-230ENST00000636768 UBR2Q8IWV8 1755 aa19.94■□□□□ 0.78
CACNA1A-230ENST00000636768 A0A0G2JLW4 131 aa19.94■□□□□ 0.78
CACNA1A-230ENST00000636768 DDX10Q13206 875 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-230ENST00000636768 DCTN1Q14203 1278 aa19.93■□□□□ 0.78
CACNA1A-230ENST00000636768 ZNF330Q9Y3S2 320 aaPredicted RBP19.93■□□□□ 0.78
CACNA1A-230ENST00000636768 A0A087WZG4 1122 aa19.92■□□□□ 0.78
CACNA1A-230ENST00000636768 POLRMTO00411 1230 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-230ENST00000636768 KCNQ3O43525 872 aa19.92■□□□□ 0.78
CACNA1A-230ENST00000636768 HTATSF1O43719 755 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-230ENST00000636768 DPEP1P16444 411 aa19.92■□□□□ 0.78
CACNA1A-230ENST00000636768 RALBP1Q15311 655 aa19.92■□□□□ 0.78
CACNA1A-230ENST00000636768 BCS1LQ9Y276 419 aa19.92■□□□□ 0.78
CACNA1A-230ENST00000636768 TM4SF1P30408 202 aa19.91■□□□□ 0.78
CACNA1A-230ENST00000636768 NPM2Q86SE8 214 aaKnown RBP19.91■□□□□ 0.78
CACNA1A-230ENST00000636768 EIF5P55010 431 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-230ENST00000636768 SIPA1L3O60292 1781 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-230ENST00000636768 NFIXQ14938 502 aa19.89■□□□□ 0.77
CACNA1A-230ENST00000636768 PNNQ9H307 717 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-230ENST00000636768 MAPK8IP3Q9UPT6 1336 aa19.89■□□□□ 0.77
CACNA1A-230ENST00000636768 KIF13BQ9NQT8 1826 aa19.88■□□□□ 0.77
CACNA1A-230ENST00000636768 A1BGP04217 495 aa19.88■□□□□ 0.77
CACNA1A-230ENST00000636768 IL6STP40189 918 aaPredicted RBP19.88■□□□□ 0.77
CACNA1A-230ENST00000636768 BCL2L12Q9HB09 334 aa19.88■□□□□ 0.77
CACNA1A-230ENST00000636768 SNRPA1P09661 255 aaKnown RBP19.87■□□□□ 0.77
CACNA1A-230ENST00000636768 PLEKHF1Q96S99 279 aa19.87■□□□□ 0.77
CACNA1A-230ENST00000636768 ATP10DQ9P241 1426 aa19.86■□□□□ 0.77
CACNA1A-230ENST00000636768 GIGYF1O75420 1035 aaPredicted RBP19.86■□□□□ 0.77
CACNA1A-230ENST00000636768 TAF7Q15545 349 aaPredicted RBP19.86■□□□□ 0.77
CACNA1A-230ENST00000636768 NFE2L2Q16236 605 aa19.86■□□□□ 0.77
CACNA1A-230ENST00000636768 BICDL1Q6ZP65 573 aa19.86■□□□□ 0.77
CACNA1A-230ENST00000636768 PIM2Q9P1W9 311 aa19.86■□□□□ 0.77
CACNA1A-230ENST00000636768 TBC1D2BQ9UPU7 963 aa19.86■□□□□ 0.77
CACNA1A-230ENST00000636768 KIAA1551Q9HCM1 1747 aa19.85■□□□□ 0.77
CACNA1A-230ENST00000636768 MYBBP1AQ9BQG0 1328 aaKnown RBP19.85■□□□□ 0.77
CACNA1A-230ENST00000636768 SERPINB2P05120 415 aa19.85■□□□□ 0.77
CACNA1A-230ENST00000636768 CHRNA5P30532 468 aa19.85■□□□□ 0.77
CACNA1A-230ENST00000636768 USP16Q9Y5T5 823 aa19.85■□□□□ 0.77
CACNA1A-230ENST00000636768 N4BP2Q86UW6 1770 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-230ENST00000636768 PRAMEF22A3QJZ6 481 aa19.84■□□□□ 0.77
CACNA1A-230ENST00000636768 KCNA3P22001 575 aa19.84■□□□□ 0.77
CACNA1A-230ENST00000636768 DALRD3Q5D0E6 543 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-230ENST00000636768 ARHGAP27Q6ZUM4 889 aa19.84■□□□□ 0.77
CACNA1A-230ENST00000636768 MIS18AQ9NYP9 233 aa19.84■□□□□ 0.77
CACNA1A-230ENST00000636768 ADCY9O60503 1353 aa19.83■□□□□ 0.77
CACNA1A-230ENST00000636768 PIP4K2AP48426 406 aaPredicted RBP19.83■□□□□ 0.77
CACNA1A-230ENST00000636768 PNISRQ8TF01 805 aaKnown RBP19.83■□□□□ 0.77
CACNA1A-230ENST00000636768 TBC1D9BQ66K14 1250 aa19.82■□□□□ 0.76
CACNA1A-230ENST00000636768 DZIP3Q86Y13 1208 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-230ENST00000636768 ZNF526Q8TF50 670 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-230ENST00000636768 C1QTNF8P60827 252 aa19.81■□□□□ 0.76
CACNA1A-230ENST00000636768 THUMPD2Q9BTF0 503 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-230ENST00000636768 GPBP1L1Q9HC44 474 aaPredicted RBP19.81■□□□□ 0.76
CACNA1A-230ENST00000636768 CAMTA2O94983 1202 aa19.8■□□□□ 0.76
CACNA1A-230ENST00000636768 CARMIL3Q8ND23 1372 aa19.8■□□□□ 0.76
CACNA1A-230ENST00000636768 SCN7AQ01118 1682 aa19.78■□□□□ 0.76
CACNA1A-230ENST00000636768 NPHP1O15259 732 aa19.78■□□□□ 0.76
CACNA1A-230ENST00000636768 SETDB2Q96T68 719 aa19.78■□□□□ 0.76
CACNA1A-230ENST00000636768 RIPK4P57078 832 aa19.77■□□□□ 0.76
CACNA1A-230ENST00000636768 WDR43Q15061 677 aaKnown RBP eCLIP19.77■□□□□ 0.76
CACNA1A-230ENST00000636768 C2CD5Q86YS7 1000 aa19.77■□□□□ 0.76
CACNA1A-230ENST00000636768 ZNF652Q9Y2D9 606 aa19.77■□□□□ 0.76
CACNA1A-230ENST00000636768 NBPF26B4DH59 902 aa19.76■□□□□ 0.75
CACNA1A-230ENST00000636768 H0YIN7 160 aa19.76■□□□□ 0.75
CACNA1A-230ENST00000636768 NBPF10Q6P3W6 841 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-230ENST00000636768 NBPF15Q8N660 670 aa19.76■□□□□ 0.75
CACNA1A-230ENST00000636768 NRXN2Q9P2S2 1712 aa19.76■□□□□ 0.75
CACNA1A-230ENST00000636768 EIF4A1P60842 406 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-230ENST00000636768 LMOD3Q0VAK6 560 aa19.75■□□□□ 0.75
CACNA1A-230ENST00000636768 PRR5LQ6MZQ0 368 aa19.75■□□□□ 0.75
CACNA1A-230ENST00000636768 CNBD1Q8NA66 436 aa19.75■□□□□ 0.75
CACNA1A-230ENST00000636768 CLEC4GQ6UXB4 293 aa19.74■□□□□ 0.75
CACNA1A-230ENST00000636768 CCDC146Q8IYE0 955 aa19.74■□□□□ 0.75
CACNA1A-230ENST00000636768 CCDC24Q8N4L8 307 aa19.74■□□□□ 0.75
CACNA1A-230ENST00000636768 TTLL6Q8N841 843 aa19.74■□□□□ 0.75
CACNA1A-230ENST00000636768 TSPYL4Q9UJ04 414 aa19.74■□□□□ 0.75
CACNA1A-230ENST00000636768 BRCA1P38398 1863 aaKnown RBP19.73■□□□□ 0.75
CACNA1A-230ENST00000636768 SENP3-EIF4A1A0A087X0R7 540 aa19.73■□□□□ 0.75
CACNA1A-230ENST00000636768 PDE6BP35913 854 aa19.73■□□□□ 0.75
CACNA1A-230ENST00000636768 TMPOP42166 694 aaKnown RBP19.73■□□□□ 0.75
CACNA1A-230ENST00000636768 ST5P78524 1137 aa19.73■□□□□ 0.75
CACNA1A-230ENST00000636768 C9orf131Q5VYM1 1079 aa19.73■□□□□ 0.75
CACNA1A-230ENST00000636768 BRIP1Q9BX63 1249 aa19.73■□□□□ 0.75
CACNA1A-230ENST00000636768 AFDNP55196 1824 aaKnown RBP19.73■□□□□ 0.75
CACNA1A-230ENST00000636768 NBPF5PQ86XG9 351 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-230ENST00000636768 PRKRIP1Q9H875 184 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-230ENST00000636768 PDZRN3Q9UPQ7 1066 aa19.72■□□□□ 0.75
CACNA1A-230ENST00000636768 RRP7AQ9Y3A4 280 aaKnown RBP19.72■□□□□ 0.75
CACNA1A-230ENST00000636768 DLG5Q8TDM6 1919 aa19.72■□□□□ 0.75
CACNA1A-230ENST00000636768 ZEB1P37275 1124 aaPredicted RBP19.71■□□□□ 0.75
CACNA1A-230ENST00000636768 NEUROD2Q15784 382 aa19.71■□□□□ 0.75
CACNA1A-230ENST00000636768 NGEFQ8N5V2 710 aa19.71■□□□□ 0.75
CACNA1A-230ENST00000636768 ZNF622Q969S3 477 aaKnown RBP eCLIP19.71■□□□□ 0.75
CACNA1A-230ENST00000636768 RNF181Q9P0P0 153 aa19.71■□□□□ 0.75
CACNA1A-230ENST00000636768 KDM3BQ7LBC6 1761 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms