RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 PDIA6Q15084 440 aa13.71□□□□□ -0.22
CLN5-213ENST00000636681 C20orf194Q5TEA3 1177 aa13.71□□□□□ -0.22
CLN5-213ENST00000636681 FRAT1Q92837 279 aaPredicted RBP13.71□□□□□ -0.22
CLN5-213ENST00000636681 NBPF26B4DH59 902 aa13.7□□□□□ -0.22
CLN5-213ENST00000636681 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
CLN5-213ENST00000636681 MYL6BP14649 208 aa13.7□□□□□ -0.22
CLN5-213ENST00000636681 NBPF14Q5TI25 921 aa13.7□□□□□ -0.22
CLN5-213ENST00000636681 NBPF10Q6P3W6 841 aaKnown RBP13.7□□□□□ -0.22
CLN5-213ENST00000636681 NBPF15Q8N660 670 aa13.7□□□□□ -0.22
CLN5-213ENST00000636681 LRRC4BQ9NT99 713 aa13.7□□□□□ -0.22
CLN5-213ENST00000636681 PROM2Q8N271 834 aa13.69□□□□□ -0.22
CLN5-213ENST00000636681 LINC00116Q8NCU8 138 aa13.69□□□□□ -0.22
CLN5-213ENST00000636681 NOB1Q9ULX3 412 aaKnown RBP13.69□□□□□ -0.22
CLN5-213ENST00000636681 CICQ96RK0 1608 aaPredicted RBP13.68□□□□□ -0.22
CLN5-213ENST00000636681 APBA3O96018 575 aa13.68□□□□□ -0.22
CLN5-213ENST00000636681 CT47B1P0C2W7 299 aaPredicted RBP13.68□□□□□ -0.22
CLN5-213ENST00000636681 RRP1P56182 461 aaKnown RBP13.68□□□□□ -0.22
CLN5-213ENST00000636681 ZNF831Q5JPB2 1677 aa13.68□□□□□ -0.22
CLN5-213ENST00000636681 CYP19A1P11511 503 aaPredicted RBP13.68□□□□□ -0.22
CLN5-213ENST00000636681 ALDH1L2Q3SY69 923 aa13.68□□□□□ -0.22
CLN5-213ENST00000636681 SMARCC1Q92922 1105 aaPredicted RBP13.68□□□□□ -0.22
CLN5-213ENST00000636681 CLUAP1Q96AJ1 413 aa13.68□□□□□ -0.22
CLN5-213ENST00000636681 RNF123Q5XPI4 1314 aa13.67□□□□□ -0.22
CLN5-213ENST00000636681 HOXB7P09629 217 aa13.67□□□□□ -0.22
CLN5-213ENST00000636681 CCDC30Q5VVM6 783 aa13.67□□□□□ -0.22
CLN5-213ENST00000636681 LRP10Q7Z4F1 713 aa13.67□□□□□ -0.22
CLN5-213ENST00000636681 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
CLN5-213ENST00000636681 ZBTB1Q9Y2K1 713 aa13.67□□□□□ -0.22
CLN5-213ENST00000636681 RREB1Q92766 1687 aa13.66□□□□□ -0.22
CLN5-213ENST00000636681 RLBP1P12271 317 aa13.66□□□□□ -0.22
CLN5-213ENST00000636681 CANXP27824 592 aaKnown RBP13.66□□□□□ -0.22
CLN5-213ENST00000636681 ILDR2Q71H61 639 aa13.66□□□□□ -0.22
CLN5-213ENST00000636681 VSIG10Q8N0Z9 540 aa13.66□□□□□ -0.22
CLN5-213ENST00000636681 ZNF428Q96B54 188 aa13.66□□□□□ -0.22
CLN5-213ENST00000636681 CCNL1Q9UK58 526 aaPredicted RBP13.66□□□□□ -0.22
CLN5-213ENST00000636681 C4BP0C0L5 1744 aa13.66□□□□□ -0.22
CLN5-213ENST00000636681 AIMP1Q12904 312 aaKnown RBP13.66□□□□□ -0.22
CLN5-213ENST00000636681 INTS5Q6P9B9 1019 aaKnown RBP13.66□□□□□ -0.22
CLN5-213ENST00000636681 DEFB132Q7Z7B7 95 aa13.66□□□□□ -0.22
CLN5-213ENST00000636681 PANK1Q8TE04 598 aa13.66□□□□□ -0.22
CLN5-213ENST00000636681 STK31Q9BXU1 1019 aa13.66□□□□□ -0.22
CLN5-213ENST00000636681 ZNF330Q9Y3S2 320 aaPredicted RBP13.66□□□□□ -0.22
CLN5-213ENST00000636681 TUBGCP6Q96RT7 1819 aa13.65□□□□□ -0.22
CLN5-213ENST00000636681 F6X3S4 739 aa13.65□□□□□ -0.22
CLN5-213ENST00000636681 CRKLP46109 303 aaKnown RBP13.65□□□□□ -0.22
CLN5-213ENST00000636681 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
CLN5-213ENST00000636681 TRIM27P14373 513 aa13.64□□□□□ -0.23
CLN5-213ENST00000636681 TXNRD1Q16881 649 aa13.64□□□□□ -0.23
CLN5-213ENST00000636681 TTLL7Q6ZT98 887 aa13.64□□□□□ -0.23
CLN5-213ENST00000636681 DDX21Q9NR30 783 aaKnown RBP eCLIP13.64□□□□□ -0.23
CLN5-213ENST00000636681 DBF4Q9UBU7 674 aaPredicted RBP13.64□□□□□ -0.23
CLN5-213ENST00000636681 ARFGEF2Q9Y6D5 1785 aa13.64□□□□□ -0.23
CLN5-213ENST00000636681 NUP188Q5SRE5 1749 aa13.63□□□□□ -0.23
CLN5-213ENST00000636681 FLIIQ13045 1269 aa13.63□□□□□ -0.23
CLN5-213ENST00000636681 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
CLN5-213ENST00000636681 XAGE3Q8WTP9 111 aa13.63□□□□□ -0.23
CLN5-213ENST00000636681 UBR3Q6ZT12 1888 aa13.63□□□□□ -0.23
CLN5-213ENST00000636681 SOS1Q07889 1333 aaPredicted RBP13.63□□□□□ -0.23
CLN5-213ENST00000636681 COPS6Q7L5N1 327 aa13.63□□□□□ -0.23
CLN5-213ENST00000636681 NUP98P52948 1817 aa13.62□□□□□ -0.23
CLN5-213ENST00000636681 STARD3NLO95772 234 aa13.62□□□□□ -0.23
CLN5-213ENST00000636681 CCDC87Q9NVE4 849 aa13.62□□□□□ -0.23
CLN5-213ENST00000636681 RGPD3A6NKT7 1758 aaPredicted RBP13.62□□□□□ -0.23
CLN5-213ENST00000636681 RGPD4Q7Z3J3 1758 aa13.62□□□□□ -0.23
CLN5-213ENST00000636681 ADCY9O60503 1353 aa13.61□□□□□ -0.23
CLN5-213ENST00000636681 C4AP0C0L4 1744 aa13.61□□□□□ -0.23
CLN5-213ENST00000636681 BRPF1P55201 1214 aaPredicted RBP13.61□□□□□ -0.23
CLN5-213ENST00000636681 FKBP5Q13451 457 aaPredicted RBP13.61□□□□□ -0.23
CLN5-213ENST00000636681 ZKSCAN2Q63HK3 967 aa13.61□□□□□ -0.23
CLN5-213ENST00000636681 TEX13AQ9BXU3 409 aaPredicted RBP13.61□□□□□ -0.23
CLN5-213ENST00000636681 PLSCR1O15162 318 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 ATF7IPQ6VMQ6 1270 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 CAMKK2Q96RR4 588 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
CLN5-213ENST00000636681 KIF16BQ96L93 1317 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 PI4KAP2A4QPH2 592 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 ZNF827Q17R98 1081 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 TMEM57Q8N5G2 664 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 PI4KAP1Q8N8J0 262 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 ARXQ96QS3 562 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 CRBNQ96SW2 442 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 HYPKQ9NX55 129 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 TBC1D2BQ9UPU7 963 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 COG6Q9Y2V7 657 aa13.6□□□□□ -0.23
CLN5-213ENST00000636681 N4BP2Q86UW6 1770 aaPredicted RBP13.59□□□□□ -0.23
CLN5-213ENST00000636681 FKBP8Q14318 412 aa13.59□□□□□ -0.23
CLN5-213ENST00000636681 EXOC6Q8TAG9 804 aa13.59□□□□□ -0.23
CLN5-213ENST00000636681 ZBTB3Q9H5J0 574 aa13.59□□□□□ -0.23
CLN5-213ENST00000636681 GNPATO15228 680 aa13.58□□□□□ -0.23
CLN5-213ENST00000636681 EIF5P55010 431 aaKnown RBP13.58□□□□□ -0.23
CLN5-213ENST00000636681 SLC4A10Q6U841 1118 aa13.58□□□□□ -0.23
CLN5-213ENST00000636681 PHF14O94880 888 aa13.58□□□□□ -0.24
CLN5-213ENST00000636681 DZIP1LQ8IYY4 767 aaKnown RBP13.58□□□□□ -0.24
CLN5-213ENST00000636681 ANO8Q9HCE9 1232 aaPredicted RBP13.58□□□□□ -0.24
CLN5-213ENST00000636681 MAP3K2Q9Y2U5 619 aa13.58□□□□□ -0.24
CLN5-213ENST00000636681 ERBB4Q15303 1308 aa13.58□□□□□ -0.24
CLN5-213ENST00000636681 CNTNAP4Q9C0A0 1308 aa13.58□□□□□ -0.24
CLN5-213ENST00000636681 BCORQ6W2J9 1755 aa13.58□□□□□ -0.24
CLN5-213ENST00000636681 HLFQ16534 295 aa13.57□□□□□ -0.24
CLN5-213ENST00000636681 UPF1Q92900 1129 aaKnown RBP eCLIP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms