RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 GPC1P35052 558 aa8.66□□□□□ -1.02
CLN8-210ENST00000636605 LYSMD3Q7Z3D4 306 aa8.66□□□□□ -1.02
CLN8-210ENST00000636605 COL25A1Q9BXS0 654 aaPredicted RBP8.66□□□□□ -1.02
CLN8-210ENST00000636605 CDC42BPAQ5VT25 1732 aa8.66□□□□□ -1.02
CLN8-210ENST00000636605 ZMYM4Q5VZL5 1548 aa8.65□□□□□ -1.02
CLN8-210ENST00000636605 MIA2Q96PC5 1412 aa8.65□□□□□ -1.02
CLN8-210ENST00000636605 ZNF330Q9Y3S2 320 aaPredicted RBP8.65□□□□□ -1.02
CLN8-210ENST00000636605 RICTORQ6R327 1708 aa8.65□□□□□ -1.03
CLN8-210ENST00000636605 TSPY4P0CV99 314 aa8.64□□□□□ -1.03
CLN8-210ENST00000636605 TSPY10P0CW01 314 aa8.64□□□□□ -1.03
CLN8-210ENST00000636605 AFAP1Q8N556 730 aa8.64□□□□□ -1.03
CLN8-210ENST00000636605 CNTNAP3BQ96NU0 1288 aa8.64□□□□□ -1.03
CLN8-210ENST00000636605 CNTNAP3Q9BZ76 1288 aa8.64□□□□□ -1.03
CLN8-210ENST00000636605 OSBPL3Q9H4L5 887 aa8.64□□□□□ -1.03
CLN8-210ENST00000636605 ABCC1P33527 1531 aa8.64□□□□□ -1.03
CLN8-210ENST00000636605 ZFYVE16Q7Z3T8 1539 aa8.64□□□□□ -1.03
CLN8-210ENST00000636605 MLH3Q9UHC1 1453 aa8.64□□□□□ -1.03
CLN8-210ENST00000636605 SPAG9O60271 1321 aaKnown RBP8.63□□□□□ -1.03
CLN8-210ENST00000636605 ARID4BQ4LE39 1312 aaPredicted RBP8.63□□□□□ -1.03
CLN8-210ENST00000636605 A0A1W2PRU2 124 aa8.63□□□□□ -1.03
CLN8-210ENST00000636605 SLURP2P0DP57 97 aa8.63□□□□□ -1.03
CLN8-210ENST00000636605 CLN3Q13286 438 aa8.63□□□□□ -1.03
CLN8-210ENST00000636605 KANK4Q5T7N3 995 aaPredicted RBP8.63□□□□□ -1.03
CLN8-210ENST00000636605 CYP2U1Q7Z449 544 aa8.63□□□□□ -1.03
CLN8-210ENST00000636605 VWA5B2Q8N398 1253 aa8.63□□□□□ -1.03
CLN8-210ENST00000636605 CUEDC1Q9NWM3 386 aaPredicted RBP8.63□□□□□ -1.03
CLN8-210ENST00000636605 TBC1D2BQ9UPU7 963 aa8.63□□□□□ -1.03
CLN8-210ENST00000636605 PCDHB11Q9Y5F2 797 aa8.63□□□□□ -1.03
CLN8-210ENST00000636605 MYOM3Q5VTT5 1437 aa8.63□□□□□ -1.03
CLN8-210ENST00000636605 KDM5CP41229 1560 aa8.62□□□□□ -1.03
CLN8-210ENST00000636605 IRF5Q13568 498 aa8.62□□□□□ -1.03
CLN8-210ENST00000636605 SV2AQ7L0J3 742 aa8.62□□□□□ -1.03
CLN8-210ENST00000636605 ATP10AO60312 1499 aa8.62□□□□□ -1.03
CLN8-210ENST00000636605 FRMPD1Q5SYB0 1578 aa8.61□□□□□ -1.03
CLN8-210ENST00000636605 ARHGEF40Q8TER5 1519 aa8.61□□□□□ -1.03
CLN8-210ENST00000636605 HNRNPMP52272 730 aaKnown RBP eCLIP8.61□□□□□ -1.03
CLN8-210ENST00000636605 RTEL1-TNFRSF6BF6WH68 1400 aa8.61□□□□□ -1.03
CLN8-210ENST00000636605 C9orf84Q5VXU9 1444 aa8.61□□□□□ -1.03
CLN8-210ENST00000636605 SAMD9LQ8IVG5 1584 aa8.61□□□□□ -1.03
CLN8-210ENST00000636605 HECW2Q9P2P5 1572 aa8.61□□□□□ -1.03
CLN8-210ENST00000636605 CDC14CA4D256 554 aa8.6□□□□□ -1.03
CLN8-210ENST00000636605 MEN1O00255 615 aa8.6□□□□□ -1.03
CLN8-210ENST00000636605 GSK3AP49840 483 aa8.6□□□□□ -1.03
CLN8-210ENST00000636605 GAS6Q14393 721 aa8.6□□□□□ -1.03
CLN8-210ENST00000636605 ZNF385CQ66K41 422 aaPredicted RBP8.6□□□□□ -1.03
CLN8-210ENST00000636605 PRICKLE2Q7Z3G6 844 aa8.6□□□□□ -1.03
CLN8-210ENST00000636605 CCDC85AQ96PX6 553 aaPredicted RBP8.6□□□□□ -1.03
CLN8-210ENST00000636605 GRIP2Q9C0E4 1043 aa8.6□□□□□ -1.03
CLN8-210ENST00000636605 CEP126Q9P2H0 1117 aa8.6□□□□□ -1.03
CLN8-210ENST00000636605 TRAPPC8Q9Y2L5 1435 aa8.6□□□□□ -1.03
CLN8-210ENST00000636605 SYCP2Q9BX26 1530 aa8.59□□□□□ -1.03
CLN8-210ENST00000636605 CCDC141Q6ZP82 1450 aa8.59□□□□□ -1.03
CLN8-210ENST00000636605 SPATA31C2B4DYI2 1134 aa8.59□□□□□ -1.03
CLN8-210ENST00000636605 RHOQP17081 205 aa8.59□□□□□ -1.03
CLN8-210ENST00000636605 PHTF2Q8N3S3 785 aa8.59□□□□□ -1.03
CLN8-210ENST00000636605 ZNF837Q96EG3 531 aaPredicted RBP8.59□□□□□ -1.03
CLN8-210ENST00000636605 ARHGEF10LQ9HCE6 1279 aa8.59□□□□□ -1.03
CLN8-210ENST00000636605 HRH3Q9Y5N1 445 aa8.59□□□□□ -1.03
CLN8-210ENST00000636605 ARHGEF12Q9NZN5 1544 aa8.59□□□□□ -1.03
CLN8-210ENST00000636605 CAMSAP2Q08AD1 1489 aa8.58□□□□□ -1.04
CLN8-210ENST00000636605 TRIM22Q8IYM9 498 aa8.58□□□□□ -1.04
CLN8-210ENST00000636605 GMCL1Q96IK5 515 aa8.58□□□□□ -1.04
CLN8-210ENST00000636605 ESF1Q9H501 851 aaKnown RBP8.58□□□□□ -1.04
CLN8-210ENST00000636605 DYRK1BQ9Y463 629 aa8.58□□□□□ -1.04
CLN8-210ENST00000636605 MBD5Q9P267 1494 aa8.57□□□□□ -1.04
CLN8-210ENST00000636605 ZNF644Q9H582 1327 aaPredicted RBP8.57□□□□□ -1.04
CLN8-210ENST00000636605 ARHGEF5Q12774 1597 aa8.57□□□□□ -1.04
CLN8-210ENST00000636605 REREQ9P2R6 1566 aa8.57□□□□□ -1.04
CLN8-210ENST00000636605 YEATS2Q9ULM3 1422 aa8.57□□□□□ -1.04
CLN8-210ENST00000636605 GNRH1P01148 92 aa8.57□□□□□ -1.04
CLN8-210ENST00000636605 WDR44Q5JSH3 913 aa8.57□□□□□ -1.04
CLN8-210ENST00000636605 CDCA7Q9BWT1 371 aaPredicted RBP8.57□□□□□ -1.04
CLN8-210ENST00000636605 CHIC2Q9UKJ5 165 aa8.57□□□□□ -1.04
CLN8-210ENST00000636605 FGD6Q6ZV73 1430 aa8.56□□□□□ -1.04
CLN8-210ENST00000636605 ATP7AQ04656 1500 aa8.56□□□□□ -1.04
CLN8-210ENST00000636605 IL2RAP01589 272 aa8.56□□□□□ -1.04
CLN8-210ENST00000636605 KCNMA1Q12791 1236 aa8.56□□□□□ -1.04
CLN8-210ENST00000636605 NBPF10Q6P3W6 841 aaKnown RBP8.56□□□□□ -1.04
CLN8-210ENST00000636605 NBPF15Q8N660 670 aa8.56□□□□□ -1.04
CLN8-210ENST00000636605 WHAMMQ8TF30 809 aa8.56□□□□□ -1.04
CLN8-210ENST00000636605 NLRP3Q96P20 1036 aa8.56□□□□□ -1.04
CLN8-210ENST00000636605 AGLP35573 1532 aa8.55□□□□□ -1.04
CLN8-210ENST00000636605 ARHGEF15O94989 841 aa8.55□□□□□ -1.04
CLN8-210ENST00000636605 POU4F2Q12837 409 aa8.55□□□□□ -1.04
CLN8-210ENST00000636605 ESYT1Q9BSJ8 1104 aa8.55□□□□□ -1.04
CLN8-210ENST00000636605 KIDINS220Q9ULH0 1771 aa8.54□□□□□ -1.04
CLN8-210ENST00000636605 INO80Q9ULG1 1556 aaPredicted RBP8.54□□□□□ -1.04
CLN8-210ENST00000636605 DIP2CQ9Y2E4 1556 aa8.54□□□□□ -1.04
CLN8-210ENST00000636605 A2MP01023 1474 aa8.54□□□□□ -1.04
CLN8-210ENST00000636605 TCOF1Q13428 1488 aaKnown RBP8.54□□□□□ -1.04
CLN8-210ENST00000636605 EIF4G2P78344 907 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLN8-210ENST00000636605 SRSF11Q05519 484 aaKnown RBP8.54□□□□□ -1.04
CLN8-210ENST00000636605 MCM6Q14566 821 aa8.54□□□□□ -1.04
CLN8-210ENST00000636605 DBN1Q16643 649 aa8.54□□□□□ -1.04
CLN8-210ENST00000636605 SLC27A3Q5K4L6 730 aa8.54□□□□□ -1.04
CLN8-210ENST00000636605 FHDC1Q9C0D6 1143 aaPredicted RBP8.54□□□□□ -1.04
CLN8-210ENST00000636605 PRM3Q9NNZ6 103 aa8.54□□□□□ -1.04
CLN8-210ENST00000636605 RAB6BQ9NRW1 208 aa8.54□□□□□ -1.04
CLN8-210ENST00000636605 PTPN23Q9H3S7 1636 aa8.54□□□□□ -1.04
CLN8-210ENST00000636605 ADGBQ8N7X0 1667 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms