RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
CLN5-209ENST00000636405 DDIT3P35638 169 aa18.41■□□□□ 0.54
CLN5-209ENST00000636405 ZNF790Q6PG37 636 aa18.41■□□□□ 0.54
CLN5-209ENST00000636405 MEGF6O75095 1541 aa18.4■□□□□ 0.54
CLN5-209ENST00000636405 GZF1Q9H116 711 aaPredicted RBP18.4■□□□□ 0.54
CLN5-209ENST00000636405 C9orf78Q9NZ63 289 aaPredicted RBP18.4■□□□□ 0.54
CLN5-209ENST00000636405 PXDNLA1KZ92 1463 aa18.4■□□□□ 0.54
CLN5-209ENST00000636405 ERC2O15083 957 aa18.4■□□□□ 0.54
CLN5-209ENST00000636405 POLA2Q14181 598 aa18.4■□□□□ 0.54
CLN5-209ENST00000636405 RHPN1Q8TCX5 695 aa18.4■□□□□ 0.54
CLN5-209ENST00000636405 ARXQ96QS3 562 aa18.4■□□□□ 0.54
CLN5-209ENST00000636405 SLC52A2Q9HAB3 445 aa18.4■□□□□ 0.54
CLN5-209ENST00000636405 CYP27B1O15528 508 aa18.39■□□□□ 0.53
CLN5-209ENST00000636405 PDIA6Q15084 440 aa18.39■□□□□ 0.53
CLN5-209ENST00000636405 KSR2Q6VAB6 950 aa18.39■□□□□ 0.53
CLN5-209ENST00000636405 PA2G4Q9UQ80 394 aaKnown RBP18.39■□□□□ 0.53
CLN5-209ENST00000636405 KDM6AO15550 1401 aaPredicted RBP18.39■□□□□ 0.53
CLN5-209ENST00000636405 NCOA3Q9Y6Q9 1424 aa18.39■□□□□ 0.53
CLN5-209ENST00000636405 HEG1Q9ULI3 1381 aa18.39■□□□□ 0.53
CLN5-209ENST00000636405 ZNF496Q96IT1 587 aaPredicted RBP18.39■□□□□ 0.53
CLN5-209ENST00000636405 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
CLN5-209ENST00000636405 ALS2Q96Q42 1657 aa18.38■□□□□ 0.53
CLN5-209ENST00000636405 CACNA1FO60840 1977 aa18.38■□□□□ 0.53
CLN5-209ENST00000636405 IL25Q9H293 177 aa18.38■□□□□ 0.53
CLN5-209ENST00000636405 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
CLN5-209ENST00000636405 SPG7Q9UQ90 795 aa18.38■□□□□ 0.53
CLN5-209ENST00000636405 SPATA31A3Q5VYP0 1347 aa18.37■□□□□ 0.53
CLN5-209ENST00000636405 BRINP3Q76B58 766 aa18.37■□□□□ 0.53
CLN5-209ENST00000636405 TNPO1Q92973 898 aaKnown RBP18.37■□□□□ 0.53
CLN5-209ENST00000636405 USP16Q9Y5T5 823 aa18.37■□□□□ 0.53
CLN5-209ENST00000636405 OS9Q13438 667 aaPredicted RBP18.37■□□□□ 0.53
CLN5-209ENST00000636405 RABEP1Q15276 862 aa18.37■□□□□ 0.53
CLN5-209ENST00000636405 REC8O95072 547 aa18.36■□□□□ 0.53
CLN5-209ENST00000636405 CHMLP26374 656 aa18.36■□□□□ 0.53
CLN5-209ENST00000636405 IFNL2Q8IZJ0 200 aa18.36■□□□□ 0.53
CLN5-209ENST00000636405 ESYT1Q9BSJ8 1104 aa18.36■□□□□ 0.53
CLN5-209ENST00000636405 BRPF3Q9ULD4 1205 aa18.36■□□□□ 0.53
CLN5-209ENST00000636405 STAP2Q9UGK3 403 aa18.35■□□□□ 0.53
CLN5-209ENST00000636405 TNS3Q68CZ2 1445 aa18.35■□□□□ 0.53
CLN5-209ENST00000636405 IL27Q8NEV9 243 aa18.35■□□□□ 0.53
CLN5-209ENST00000636405 ANO2Q9NQ90 1003 aa18.35■□□□□ 0.53
CLN5-209ENST00000636405 DDX21Q9NR30 783 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLN5-209ENST00000636405 HYPKQ9NX55 129 aa18.35■□□□□ 0.53
CLN5-209ENST00000636405 RIC3Q7Z5B4 369 aa18.34■□□□□ 0.53
CLN5-209ENST00000636405 PALD1Q9ULE6 856 aa18.34■□□□□ 0.53
CLN5-209ENST00000636405 COPS6Q7L5N1 327 aa18.34■□□□□ 0.53
CLN5-209ENST00000636405 XAGE3Q8WTP9 111 aa18.34■□□□□ 0.53
CLN5-209ENST00000636405 SUCLG2Q96I99 432 aa18.34■□□□□ 0.53
CLN5-209ENST00000636405 CHMP4AQ9BY43 222 aa18.34■□□□□ 0.53
CLN5-209ENST00000636405 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.34■□□□□ 0.53
CLN5-209ENST00000636405 ZNF335Q9H4Z2 1342 aaPredicted RBP18.33■□□□□ 0.53
CLN5-209ENST00000636405 RAB11FIP3O75154 756 aa18.33■□□□□ 0.52
CLN5-209ENST00000636405 IGKV5-2P06315 115 aa18.33■□□□□ 0.52
CLN5-209ENST00000636405 SSFA2P28290 1259 aa18.33■□□□□ 0.52
CLN5-209ENST00000636405 KIF1BPQ96EK5 621 aa18.33■□□□□ 0.52
CLN5-209ENST00000636405 KAZALD1Q96I82 304 aa18.33■□□□□ 0.52
CLN5-209ENST00000636405 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.52
CLN5-209ENST00000636405 PI4K2BQ8TCG2 481 aa18.32■□□□□ 0.52
CLN5-209ENST00000636405 NOL8Q76FK4 1167 aaKnown RBP18.32■□□□□ 0.52
CLN5-209ENST00000636405 KLHDC4Q8TBB5 520 aa18.32■□□□□ 0.52
CLN5-209ENST00000636405 PRDM11Q9NQV5 511 aa18.32■□□□□ 0.52
CLN5-209ENST00000636405 BICC1Q9H694 974 aaKnown RBP18.31■□□□□ 0.52
CLN5-209ENST00000636405 OVOS2A0A0G2JMS6 1433 aa18.31■□□□□ 0.52
CLN5-209ENST00000636405 GRM8O00222 908 aa18.31■□□□□ 0.52
CLN5-209ENST00000636405 TRAK2O60296 914 aa18.31■□□□□ 0.52
CLN5-209ENST00000636405 ALDH1L1O75891 902 aa18.31■□□□□ 0.52
CLN5-209ENST00000636405 RAB3GAP1Q15042 981 aa18.31■□□□□ 0.52
CLN5-209ENST00000636405 TTC5Q8N0Z6 440 aa18.31■□□□□ 0.52
CLN5-209ENST00000636405 ZGPATQ8N5A5 531 aaKnown RBP18.31■□□□□ 0.52
CLN5-209ENST00000636405 LINS1Q8NG48 757 aa18.31■□□□□ 0.52
CLN5-209ENST00000636405 MYD88Q99836 296 aa18.31■□□□□ 0.52
CLN5-209ENST00000636405 SIL1Q9H173 461 aa18.31■□□□□ 0.52
CLN5-209ENST00000636405 DCCP43146 1447 aa18.31■□□□□ 0.52
CLN5-209ENST00000636405 CABP4P57796 275 aa18.3■□□□□ 0.52
CLN5-209ENST00000636405 PKP1Q13835 747 aa18.3■□□□□ 0.52
CLN5-209ENST00000636405 TOM1L2Q6ZVM7 507 aa18.3■□□□□ 0.52
CLN5-209ENST00000636405 NEK4P51957 841 aa18.3■□□□□ 0.52
CLN5-209ENST00000636405 DCAF5Q96JK2 942 aa18.3■□□□□ 0.52
CLN5-209ENST00000636405 DDX58O95786 925 aaKnown RBP18.29■□□□□ 0.52
CLN5-209ENST00000636405 SLAIN2Q9P270 581 aa18.29■□□□□ 0.52
CLN5-209ENST00000636405 COL18A1P39060 1754 aa18.29■□□□□ 0.52
CLN5-209ENST00000636405 STRN4Q9NRL3 753 aa18.29■□□□□ 0.52
CLN5-209ENST00000636405 N4BP2Q86UW6 1770 aaPredicted RBP18.29■□□□□ 0.52
CLN5-209ENST00000636405 EPHA10Q5JZY3 1008 aa18.28■□□□□ 0.52
CLN5-209ENST00000636405 RTN4Q9NQC3 1192 aaKnown RBP18.28■□□□□ 0.52
CLN5-209ENST00000636405 ATP5J2-PTCD1G3V325 749 aa18.28■□□□□ 0.52
CLN5-209ENST00000636405 PTCD1O75127 700 aaKnown RBP18.28■□□□□ 0.52
CLN5-209ENST00000636405 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.28■□□□□ 0.52
CLN5-209ENST00000636405 ST18O60284 1047 aa18.27■□□□□ 0.52
CLN5-209ENST00000636405 EIF5BO60841 1220 aaKnown RBP18.27■□□□□ 0.52
CLN5-209ENST00000636405 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.52
CLN5-209ENST00000636405 CIZ1Q9ULV3 898 aaPredicted RBP18.27■□□□□ 0.52
CLN5-209ENST00000636405 SIPA1L3O60292 1781 aaPredicted RBP18.27■□□□□ 0.52
CLN5-209ENST00000636405 SNRPA1P09661 255 aaKnown RBP18.27■□□□□ 0.52
CLN5-209ENST00000636405 MTX1Q13505 466 aa18.27■□□□□ 0.52
CLN5-209ENST00000636405 UPF3BQ9BZI7 483 aaKnown RBP18.27■□□□□ 0.52
CLN5-209ENST00000636405 NEURL1BA8MQ27 555 aa18.26■□□□□ 0.51
CLN5-209ENST00000636405 CWC27Q6UX04 472 aaKnown RBP18.26■□□□□ 0.51
CLN5-209ENST00000636405 ANKRD13DQ6ZTN6 518 aa18.26■□□□□ 0.51
CLN5-209ENST00000636405 CLASRPQ8N2M8 674 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms