RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 URI1O94763 535 aaPredicted RBP20.23■□□□□ 0.83
CACNA1A-225ENST00000636389 TOP1P11387 765 aaKnown RBP20.23■□□□□ 0.83
CACNA1A-225ENST00000636389 GUCY1B3Q02153 619 aa20.23■□□□□ 0.83
CACNA1A-225ENST00000636389 ZSCAN12O43309 604 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 SPECC1LQ69YQ0 1117 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 FBF1Q8TES7 1133 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 TTC36A6NLP5 189 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 GCC1Q96CN9 775 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 FAM107BQ9H098 131 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 SMC1BQ8NDV3 1235 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 ALS2CR12Q96Q35 445 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 MTIF2P46199 727 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 NAA15Q9BXJ9 866 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 IQCGQ9H095 443 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 SULT6B1Q6IMI4 303 aa20.21■□□□□ 0.83
CACNA1A-225ENST00000636389 SFPQP23246 707 aaKnown RBP eCLIP20.21■□□□□ 0.83
CACNA1A-225ENST00000636389 KRT32Q14532 448 aa20.21■□□□□ 0.83
CACNA1A-225ENST00000636389 CCDC174Q6PII3 467 aa20.21■□□□□ 0.83
CACNA1A-225ENST00000636389 PDCL2Q8N4E4 241 aa20.21■□□□□ 0.83
CACNA1A-225ENST00000636389 CCDC6Q16204 474 aa20.21■□□□□ 0.83
CACNA1A-225ENST00000636389 A0A087WZG4 1122 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 TAF12Q16514 161 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 U3KPZ7 1027 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 CTCFLQ8NI51 663 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 SRCIN1Q9C0H9 1055 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 PRDM11Q9NQV5 511 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 PDZRN3Q9UPQ7 1066 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 SNX16P57768 344 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 TTC21AQ8NDW8 1320 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 CCDC144CPQ8IYA2 1237 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 CALML4Q96GE6 196 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 XPCQ01831 940 aaPredicted RBP20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 ATP2C2O75185 946 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 CEP135Q66GS9 1140 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 SATB1Q01826 763 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 TXNDC2Q86VQ3 553 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 IQCA1Q86XH1 822 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 BBXQ8WY36 941 aaPredicted RBP20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 SSRP1Q08945 709 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 CCDC40Q4G0X9 1142 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 TRERF1Q96PN7 1200 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 PRDM10Q9NQV6 1147 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 JADE2Q9NQC1 790 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 BRPF3Q9ULD4 1205 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 SLC12A7Q9Y666 1083 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 JPH4Q96JJ6 628 aa20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 FANCIQ9NVI1 1328 aa20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 AAMPQ13685 434 aa20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 GRPEL1Q9HAV7 217 aa20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 MYO1BO43795 1136 aa20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 EXOSC9Q06265 439 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 RFX1P22670 979 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 TBC1D5Q92609 795 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 IL1RAPL2Q9NP60 686 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 ANAPC4Q9UJX5 808 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 SYCE3A1L190 88 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 SIRT1Q96EB6 747 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 KIF18AQ8NI77 898 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 CLEC11AQ9Y240 323 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 PHACTR2O75167 634 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 YEATS4O95619 227 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 CCDC196A0A1B0GTZ2 297 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 V9GYY5 206 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 PLS1Q14651 629 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 ATP2B3Q16720 1220 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 CNNM3Q8NE01 707 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 STXBP4Q6ZWJ1 553 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 CCDC194A0A1B0GVG4 234 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 PTCD1O75127 700 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 CATIPQ7Z7H3 387 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 AKAP2Q9Y2D5 859 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 FAM212AQ96EL1 285 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 TRMT1Q9NXH9 659 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 STX6O43752 255 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 GSTA5Q7RTV2 222 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 TMCO4Q5TGY1 634 aa20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 C8orf76Q96K31 380 aa20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 GTPBP4Q9BZE4 634 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 CEP112Q8N8E3 955 aa20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 PHAXQ9H814 394 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 KIAA0753Q2KHM9 967 aa20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 C6orf229H3BNL8 230 aa20.14■□□□□ 0.82
CACNA1A-225ENST00000636389 NOL3O60936 208 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-225ENST00000636389 PPP1R9BQ96SB3 815 aa20.14■□□□□ 0.81
CACNA1A-225ENST00000636389 CCDC83Q8IWF9 413 aa20.14■□□□□ 0.81
CACNA1A-225ENST00000636389 IFIT1P09914 478 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-225ENST00000636389 NUTM1Q86Y26 1132 aa20.14■□□□□ 0.81
CACNA1A-225ENST00000636389 CCDC155Q8N6L0 562 aa20.14■□□□□ 0.81
CACNA1A-225ENST00000636389 PROCA1Q8NCQ7 364 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 EPSTI1Q96J88 318 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 ZSCAN31Q96LW9 406 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 GJC1P36383 396 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 ISM2Q6H9L7 571 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 PFDN4Q9NQP4 134 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 TMEM110-MUSTN1A8MSY1 372 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms