RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
CHD2-223ENST00000636306 JARID2Q92833 1246 aaPredicted RBP12.99□□□□□ -0.33
CHD2-223ENST00000636306 NFAT5O94916 1531 aa12.98□□□□□ -0.33
CHD2-223ENST00000636306 VAMP4O75379 141 aa12.98□□□□□ -0.33
CHD2-223ENST00000636306 KCNH5Q8NCM2 988 aa12.98□□□□□ -0.33
CHD2-223ENST00000636306 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
CHD2-223ENST00000636306 SYAP1Q96A49 352 aaPredicted RBP12.98□□□□□ -0.33
CHD2-223ENST00000636306 GEMIN8Q9NWZ8 242 aaKnown RBP12.98□□□□□ -0.33
CHD2-223ENST00000636306 MRPL50Q8N5N7 158 aaKnown RBP12.97□□□□□ -0.33
CHD2-223ENST00000636306 ABTB2Q8N961 1025 aa12.97□□□□□ -0.33
CHD2-223ENST00000636306 SOS1Q07889 1333 aaPredicted RBP12.97□□□□□ -0.33
CHD2-223ENST00000636306 RIOK3O14730 519 aaKnown RBP12.97□□□□□ -0.33
CHD2-223ENST00000636306 PHF14O94880 888 aa12.97□□□□□ -0.33
CHD2-223ENST00000636306 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
CHD2-223ENST00000636306 AEBP1Q8IUX7 1158 aa12.97□□□□□ -0.33
CHD2-223ENST00000636306 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
CHD2-223ENST00000636306 ABCC4O15439 1325 aa12.96□□□□□ -0.33
CHD2-223ENST00000636306 SLIT3O75094 1523 aa12.96□□□□□ -0.33
CHD2-223ENST00000636306 CLGNO14967 610 aa12.96□□□□□ -0.34
CHD2-223ENST00000636306 SOX12O15370 315 aa12.96□□□□□ -0.34
CHD2-223ENST00000636306 IGSF3O75054 1194 aa12.96□□□□□ -0.34
CHD2-223ENST00000636306 CAPN2P17655 700 aa12.96□□□□□ -0.34
CHD2-223ENST00000636306 RABEP1Q15276 862 aa12.96□□□□□ -0.34
CHD2-223ENST00000636306 BMP2KLQ5H9B9 411 aa12.96□□□□□ -0.34
CHD2-223ENST00000636306 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.34
CHD2-223ENST00000636306 TMEM57Q8N5G2 664 aa12.96□□□□□ -0.34
CHD2-223ENST00000636306 THUMPD2Q9BTF0 503 aaKnown RBP12.96□□□□□ -0.34
CHD2-223ENST00000636306 TMEM63CQ9P1W3 806 aa12.96□□□□□ -0.34
CHD2-223ENST00000636306 TNNQ9UQP3 1299 aa12.96□□□□□ -0.34
CHD2-223ENST00000636306 SYCE3A1L190 88 aa12.95□□□□□ -0.34
CHD2-223ENST00000636306 PRPF40AO75400 957 aaKnown RBP12.95□□□□□ -0.34
CHD2-223ENST00000636306 HOXC9P31274 260 aa12.95□□□□□ -0.34
CHD2-223ENST00000636306 KRT222Q8N1A0 295 aa12.95□□□□□ -0.34
CHD2-223ENST00000636306 DCCP43146 1447 aa12.95□□□□□ -0.34
CHD2-223ENST00000636306 CHL1O00533 1208 aa12.94□□□□□ -0.34
CHD2-223ENST00000636306 CRB1P82279 1406 aa12.94□□□□□ -0.34
CHD2-223ENST00000636306 TRPM3Q9HCF6 1732 aaPredicted RBP12.94□□□□□ -0.34
CHD2-223ENST00000636306 FOXD4L1Q9NU39 408 aa12.94□□□□□ -0.34
CHD2-223ENST00000636306 RBM27Q9P2N5 1060 aaKnown RBP12.94□□□□□ -0.34
CHD2-223ENST00000636306 PTPRCP08575 1304 aa12.94□□□□□ -0.34
CHD2-223ENST00000636306 CD2BP2O95400 341 aaKnown RBP12.94□□□□□ -0.34
CHD2-223ENST00000636306 PSME1Q06323 249 aa12.94□□□□□ -0.34
CHD2-223ENST00000636306 CTR9Q6PD62 1173 aa12.94□□□□□ -0.34
CHD2-223ENST00000636306 ZBTB40Q9NUA8 1239 aa12.94□□□□□ -0.34
CHD2-223ENST00000636306 BABAM1Q9NWV8 329 aa12.94□□□□□ -0.34
CHD2-223ENST00000636306 FAM53CQ9NYF3 392 aa12.94□□□□□ -0.34
CHD2-223ENST00000636306 FAM208AQ9UK61 1670 aaKnown RBP12.93□□□□□ -0.34
CHD2-223ENST00000636306 TRIM6-TRIM34B2RNG4 842 aa12.93□□□□□ -0.34
CHD2-223ENST00000636306 TRIM34Q9BYJ4 488 aa12.93□□□□□ -0.34
CHD2-223ENST00000636306 CACNA1FO60840 1977 aa12.93□□□□□ -0.34
CHD2-223ENST00000636306 MAP3K5Q99683 1374 aa12.93□□□□□ -0.34
CHD2-223ENST00000636306 FAM83GA6ND36 823 aa12.92□□□□□ -0.34
CHD2-223ENST00000636306 NUCB1Q02818 461 aa12.92□□□□□ -0.34
CHD2-223ENST00000636306 NCBP1Q09161 790 aaKnown RBP12.92□□□□□ -0.34
CHD2-223ENST00000636306 ESCO1Q5FWF5 840 aa12.92□□□□□ -0.34
CHD2-223ENST00000636306 KIAA1524Q8TCG1 905 aa12.92□□□□□ -0.34
CHD2-223ENST00000636306 EYA1Q99502 592 aa12.92□□□□□ -0.34
CHD2-223ENST00000636306 CHMP4AQ9BY43 222 aa12.92□□□□□ -0.34
CHD2-223ENST00000636306 BCCIPQ9P287 314 aaKnown RBP eCLIP12.92□□□□□ -0.34
CHD2-223ENST00000636306 CAMTA1Q9Y6Y1 1673 aa12.92□□□□□ -0.34
CHD2-223ENST00000636306 MST1RQ04912 1400 aa12.92□□□□□ -0.34
CHD2-223ENST00000636306 SMTNL1A8MU46 457 aa12.92□□□□□ -0.34
CHD2-223ENST00000636306 KIF18AQ8NI77 898 aa12.92□□□□□ -0.34
CHD2-223ENST00000636306 FEZ2Q9UHY8 353 aaPredicted RBP12.92□□□□□ -0.34
CHD2-223ENST00000636306 LMO7Q8WWI1 1683 aa12.91□□□□□ -0.34
CHD2-223ENST00000636306 N4BP2Q86UW6 1770 aaPredicted RBP12.91□□□□□ -0.34
CHD2-223ENST00000636306 TSPYL6Q8N831 410 aa12.91□□□□□ -0.34
CHD2-223ENST00000636306 C8orf58Q8NAV2 365 aa12.91□□□□□ -0.34
CHD2-223ENST00000636306 IP6K1Q92551 441 aa12.91□□□□□ -0.34
CHD2-223ENST00000636306 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
CHD2-223ENST00000636306 FAM177BA6PVY3 158 aa12.9□□□□□ -0.34
CHD2-223ENST00000636306 GNAT3A8MTJ3 354 aa12.9□□□□□ -0.34
CHD2-223ENST00000636306 DCTN1Q14203 1278 aa12.9□□□□□ -0.34
CHD2-223ENST00000636306 MTHFSDQ2M296 383 aaKnown RBP12.9□□□□□ -0.34
CHD2-223ENST00000636306 ABCC6O95255 1503 aa12.9□□□□□ -0.34
CHD2-223ENST00000636306 NCAPD2Q15021 1401 aa12.9□□□□□ -0.34
CHD2-223ENST00000636306 MCM10Q7L590 875 aa12.89□□□□□ -0.35
CHD2-223ENST00000636306 PROSER2Q86WR7 435 aaPredicted RBP12.89□□□□□ -0.35
CHD2-223ENST00000636306 RNF214Q8ND24 703 aa12.89□□□□□ -0.35
CHD2-223ENST00000636306 ZNF622Q969S3 477 aaKnown RBP eCLIP12.89□□□□□ -0.352e-8■■□□□ 13.7
CHD2-223ENST00000636306 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
CHD2-223ENST00000636306 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
CHD2-223ENST00000636306 C1orf167Q5SNV9 1468 aa12.89□□□□□ -0.35
CHD2-223ENST00000636306 LMTK3Q96Q04 1460 aa12.89□□□□□ -0.35
CHD2-223ENST00000636306 ZNF397Q8NF99 534 aaPredicted RBP12.89□□□□□ -0.35
CHD2-223ENST00000636306 OVOS2A0A0G2JMS6 1433 aa12.89□□□□□ -0.35
CHD2-223ENST00000636306 MED1Q15648 1581 aaPredicted RBP12.88□□□□□ -0.35
CHD2-223ENST00000636306 GOLGA6L6A8MZA4 724 aa12.88□□□□□ -0.35
CHD2-223ENST00000636306 ELL2O00472 640 aaPredicted RBP12.88□□□□□ -0.35
CHD2-223ENST00000636306 ADCY5O95622 1261 aa12.88□□□□□ -0.35
CHD2-223ENST00000636306 PSEN1P49768 467 aa12.88□□□□□ -0.35
CHD2-223ENST00000636306 FBXO41Q8TF61 875 aa12.88□□□□□ -0.35
CHD2-223ENST00000636306 TTC12Q9H892 705 aaPredicted RBP12.88□□□□□ -0.35
CHD2-223ENST00000636306 PAXBP1Q9Y5B6 917 aa12.88□□□□□ -0.35
CHD2-223ENST00000636306 KDM4FA0A1W2PPD8 638 aa12.87□□□□□ -0.35
CHD2-223ENST00000636306 REC8O95072 547 aa12.87□□□□□ -0.35
CHD2-223ENST00000636306 NUTM2GQ5VZR2 741 aa12.87□□□□□ -0.35
CHD2-223ENST00000636306 INTS3Q68E01 1043 aaKnown RBP12.87□□□□□ -0.35
CHD2-223ENST00000636306 STK31Q9BXU1 1019 aa12.87□□□□□ -0.35
CHD2-223ENST00000636306 C19orf44Q9H6X5 657 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms