RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 PALLDQ8WX93 1383 aa12.26□□□□□ -0.45
CACNA1A-223ENST00000636058 TRIM27P14373 513 aa12.25□□□□□ -0.45
CACNA1A-223ENST00000636058 FKBP8Q14318 412 aa12.25□□□□□ -0.45
CACNA1A-223ENST00000636058 ATF7IPQ6VMQ6 1270 aa12.25□□□□□ -0.45
CACNA1A-223ENST00000636058 PTF1AQ7RTS3 328 aa12.25□□□□□ -0.45
CACNA1A-223ENST00000636058 SMARCC1Q92922 1105 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-223ENST00000636058 SLC4A9Q96Q91 983 aa12.25□□□□□ -0.45
CACNA1A-223ENST00000636058 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
CACNA1A-223ENST00000636058 PTPRCP08575 1304 aa12.25□□□□□ -0.45
CACNA1A-223ENST00000636058 PDIA6Q15084 440 aa12.24□□□□□ -0.45
CACNA1A-223ENST00000636058 ERBB4Q15303 1308 aa12.24□□□□□ -0.45
CACNA1A-223ENST00000636058 G2E3Q7L622 706 aa12.24□□□□□ -0.45
CACNA1A-223ENST00000636058 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
CACNA1A-223ENST00000636058 TEX13AQ9BXU3 409 aaPredicted RBP12.24□□□□□ -0.45
CACNA1A-223ENST00000636058 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
CACNA1A-223ENST00000636058 DDX21Q9NR30 783 aaKnown RBP eCLIP12.24□□□□□ -0.45
CACNA1A-223ENST00000636058 TNNQ9UQP3 1299 aa12.24□□□□□ -0.45
CACNA1A-223ENST00000636058 LY75O60449 1722 aa12.23□□□□□ -0.45
CACNA1A-223ENST00000636058 MS4A1P11836 297 aa12.23□□□□□ -0.45
CACNA1A-223ENST00000636058 RLBP1P12271 317 aa12.23□□□□□ -0.45
CACNA1A-223ENST00000636058 FLIIQ13045 1269 aa12.23□□□□□ -0.45
CACNA1A-223ENST00000636058 API5Q9BZZ5 524 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-223ENST00000636058 COL5A3P25940 1745 aaPredicted RBP12.23□□□□□ -0.45
CACNA1A-223ENST00000636058 ABCC4O15439 1325 aa12.22□□□□□ -0.45
CACNA1A-223ENST00000636058 LOC102724428A0A0B4J2F2 783 aa12.22□□□□□ -0.45
CACNA1A-223ENST00000636058 SIK1P57059 783 aa12.22□□□□□ -0.45
CACNA1A-223ENST00000636058 PROSER3Q2NL68 480 aa12.22□□□□□ -0.45
CACNA1A-223ENST00000636058 ERICH6BQ5W0A0 696 aa12.22□□□□□ -0.45
CACNA1A-223ENST00000636058 LRP10Q7Z4F1 713 aa12.22□□□□□ -0.45
CACNA1A-223ENST00000636058 DNAJC10Q8IXB1 793 aa12.22□□□□□ -0.45
CACNA1A-223ENST00000636058 DZIP1LQ8IYY4 767 aaKnown RBP12.22□□□□□ -0.45
CACNA1A-223ENST00000636058 PANK1Q8TE04 598 aa12.22□□□□□ -0.45
CACNA1A-223ENST00000636058 PHAXQ9H814 394 aaKnown RBP12.22□□□□□ -0.45
CACNA1A-223ENST00000636058 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
CACNA1A-223ENST00000636058 RREB1Q92766 1687 aa12.22□□□□□ -0.45
CACNA1A-223ENST00000636058 ANXA1P04083 346 aa12.21□□□□□ -0.45
CACNA1A-223ENST00000636058 FTSJ3Q8IY81 847 aaKnown RBP12.21□□□□□ -0.45
CACNA1A-223ENST00000636058 CLUAP1Q96AJ1 413 aa12.21□□□□□ -0.45
CACNA1A-223ENST00000636058 CRBNQ96SW2 442 aa12.21□□□□□ -0.45
CACNA1A-223ENST00000636058 N4BP2Q86UW6 1770 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-223ENST00000636058 NBPF26B4DH59 902 aa12.2□□□□□ -0.46
CACNA1A-223ENST00000636058 STARD3NLO95772 234 aa12.2□□□□□ -0.46
CACNA1A-223ENST00000636058 CYP19A1P11511 503 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-223ENST00000636058 ATP6V1AP38606 617 aa12.2□□□□□ -0.46
CACNA1A-223ENST00000636058 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
CACNA1A-223ENST00000636058 NBPF10Q6P3W6 841 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-223ENST00000636058 NBPF15Q8N660 670 aa12.2□□□□□ -0.46
CACNA1A-223ENST00000636058 TRIM37O94972 964 aa12.19□□□□□ -0.46
CACNA1A-223ENST00000636058 A1BGP04217 495 aa12.19□□□□□ -0.46
CACNA1A-223ENST00000636058 MYL6BP14649 208 aa12.19□□□□□ -0.46
CACNA1A-223ENST00000636058 FKBP5Q13451 457 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-223ENST00000636058 ITPK1Q13572 414 aa12.19□□□□□ -0.46
CACNA1A-223ENST00000636058 MVPQ14764 893 aaKnown RBP12.19□□□□□ -0.46
CACNA1A-223ENST00000636058 TMEM57Q8N5G2 664 aa12.19□□□□□ -0.46
CACNA1A-223ENST00000636058 EXOC6Q8TAG9 804 aa12.19□□□□□ -0.46
CACNA1A-223ENST00000636058 COG6Q9Y2V7 657 aa12.19□□□□□ -0.46
CACNA1A-223ENST00000636058 TNS1Q9HBL0 1735 aaKnown RBP12.19□□□□□ -0.46
CACNA1A-223ENST00000636058 PXDNLA1KZ92 1463 aa12.19□□□□□ -0.46
CACNA1A-223ENST00000636058 PIP4K2AP48426 406 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-223ENST00000636058 TAF1LQ8IZX4 1826 aa12.18□□□□□ -0.46
CACNA1A-223ENST00000636058 ADCY9O60503 1353 aa12.18□□□□□ -0.46
CACNA1A-223ENST00000636058 F6X3S4 739 aa12.17□□□□□ -0.46
CACNA1A-223ENST00000636058 INTS3Q68E01 1043 aaKnown RBP12.17□□□□□ -0.46
CACNA1A-223ENST00000636058 XAGE3Q8WTP9 111 aa12.17□□□□□ -0.46
CACNA1A-223ENST00000636058 NUP188Q5SRE5 1749 aa12.17□□□□□ -0.46
CACNA1A-223ENST00000636058 RGPD3A6NKT7 1758 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 RGPD4Q7Z3J3 1758 aa12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 ARFGEF2Q9Y6D5 1785 aa12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 PI4KAP2A4QPH2 592 aa12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 DDX58O95786 925 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 INTS5Q6P9B9 1019 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 KSR2Q6VAB6 950 aa12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 COPS6Q7L5N1 327 aa12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 ITPRIPQ8IWB1 547 aa12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 PI4KAP1Q8N8J0 262 aa12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 LINC00116Q8NCU8 138 aa12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 CCDC87Q9NVE4 849 aa12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 CCNL1Q9UK58 526 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 DDX19BQ9UMR2 479 aa12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 ZBTB1Q9Y2K1 713 aa12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 MYH14Q7Z406 1995 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-223ENST00000636058 CNTNAP4Q9C0A0 1308 aa12.15□□□□□ -0.46
CACNA1A-223ENST00000636058 EP400Q96L91 3159 aa12.15□□□□□ -0.46
CACNA1A-223ENST00000636058 ATP10DQ9P241 1426 aa12.15□□□□□ -0.46
CACNA1A-223ENST00000636058 IL6STP40189 918 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-223ENST00000636058 CRKLP46109 303 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-223ENST00000636058 CCT4P50991 539 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-223ENST00000636058 AIMP1Q12904 312 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-223ENST00000636058 DNAAF4Q8WXU2 420 aa12.15□□□□□ -0.46
CACNA1A-223ENST00000636058 PLSCR1O15162 318 aa12.14□□□□□ -0.47
CACNA1A-223ENST00000636058 KCNQ4P56696 695 aa12.14□□□□□ -0.47
CACNA1A-223ENST00000636058 AAMPQ13685 434 aa12.14□□□□□ -0.47
CACNA1A-223ENST00000636058 SLC27A3Q5K4L6 730 aa12.14□□□□□ -0.47
CACNA1A-223ENST00000636058 SLC4A10Q6U841 1118 aa12.14□□□□□ -0.47
CACNA1A-223ENST00000636058 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
CACNA1A-223ENST00000636058 MAP3K2Q9Y2U5 619 aa12.14□□□□□ -0.47
CACNA1A-223ENST00000636058 C4BP0C0L5 1744 aa12.14□□□□□ -0.47
CACNA1A-223ENST00000636058 ZBTB7BO15156 539 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-223ENST00000636058 EIF5P55010 431 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-223ENST00000636058 BEND3Q5T5X7 828 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms