RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 NDC80O14777 642 aa20.17■□□□□ 0.82
CACNA1A-215ENST00000635727 SMTNL1A8MU46 457 aa20.17■□□□□ 0.82
CACNA1A-215ENST00000635727 C6orf229H3BNL8 230 aa20.17■□□□□ 0.82
CACNA1A-215ENST00000635727 KIF5CO60282 957 aa20.17■□□□□ 0.82
CACNA1A-215ENST00000635727 CEP126Q9P2H0 1117 aa20.17■□□□□ 0.82
CACNA1A-215ENST00000635727 ZBED9Q6R2W3 1325 aa20.17■□□□□ 0.82
CACNA1A-215ENST00000635727 FSD2A1L4K1 749 aa20.16■□□□□ 0.82
CACNA1A-215ENST00000635727 USHBP1Q8N6Y0 703 aa20.16■□□□□ 0.82
CACNA1A-215ENST00000635727 CCDC175P0C221 793 aa20.16■□□□□ 0.82
CACNA1A-215ENST00000635727 MIA2Q96PC5 1412 aa20.16■□□□□ 0.82
CACNA1A-215ENST00000635727 CFAP57Q96MR6 1250 aa20.15■□□□□ 0.82
CACNA1A-215ENST00000635727 CIZ1Q9ULV3 898 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-215ENST00000635727 DHX57Q6P158 1386 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-215ENST00000635727 MTIF2P46199 727 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-215ENST00000635727 FLIIQ13045 1269 aa20.15■□□□□ 0.82
CACNA1A-215ENST00000635727 PRAM1Q96QH2 718 aa20.15■□□□□ 0.82
CACNA1A-215ENST00000635727 IKBKGQ9Y6K9 419 aa20.15■□□□□ 0.82
CACNA1A-215ENST00000635727 WDR33Q9C0J8 1336 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-215ENST00000635727 PRDM11Q9NQV5 511 aa20.15■□□□□ 0.82
CACNA1A-215ENST00000635727 TPD52P55327 224 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-215ENST00000635727 MTERF4Q7Z6M4 381 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-215ENST00000635727 GPTP24298 496 aa20.15■□□□□ 0.82
CACNA1A-215ENST00000635727 SMIM23A6NLE4 172 aa20.14■□□□□ 0.82
CACNA1A-215ENST00000635727 MYD88Q99836 296 aa20.14■□□□□ 0.81
CACNA1A-215ENST00000635727 PPARDQ03181 441 aa20.14■□□□□ 0.81
CACNA1A-215ENST00000635727 CNTLNQ9NXG0 1405 aa20.14■□□□□ 0.81
CACNA1A-215ENST00000635727 CCDC18Q5T9S5 1454 aa20.14■□□□□ 0.81
CACNA1A-215ENST00000635727 GRPEL1Q9HAV7 217 aa20.14■□□□□ 0.81
CACNA1A-215ENST00000635727 ODF2LQ9ULJ1 636 aa20.14■□□□□ 0.81
CACNA1A-215ENST00000635727 K7ELQ4 463 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-215ENST00000635727 VPS36Q86VN1 386 aa20.13■□□□□ 0.81
CACNA1A-215ENST00000635727 C16orf71Q8IYS4 520 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-215ENST00000635727 NAPBQ9H115 298 aa20.13■□□□□ 0.81
CACNA1A-215ENST00000635727 CTR9Q6PD62 1173 aa20.13■□□□□ 0.81
CACNA1A-215ENST00000635727 TCP11L2Q8N4U5 519 aa20.13■□□□□ 0.81
CACNA1A-215ENST00000635727 PDCL2Q8N4E4 241 aa20.12■□□□□ 0.81
CACNA1A-215ENST00000635727 IDEP14735 1019 aa20.12■□□□□ 0.81
CACNA1A-215ENST00000635727 CCDC40Q4G0X9 1142 aa20.12■□□□□ 0.81
CACNA1A-215ENST00000635727 JARID2Q92833 1246 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-215ENST00000635727 TOP1P11387 765 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-215ENST00000635727 JADE2Q9NQC1 790 aa20.12■□□□□ 0.81
CACNA1A-215ENST00000635727 BIN2Q9UBW5 565 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-215ENST00000635727 PPP2R5CQ13362 524 aa20.11■□□□□ 0.81
CACNA1A-215ENST00000635727 RBM26Q5T8P6 1007 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-215ENST00000635727 ZBTB21Q9ULJ3 1066 aa20.11■□□□□ 0.81
CACNA1A-215ENST00000635727 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
CACNA1A-215ENST00000635727 GTF2F1P35269 517 aaKnown RBP eCLIP20.11■□□□□ 0.81
CACNA1A-215ENST00000635727 EXOC6BQ9Y2D4 811 aa20.11■□□□□ 0.81
CACNA1A-215ENST00000635727 PTPN14Q15678 1187 aa20.11■□□□□ 0.81
CACNA1A-215ENST00000635727 SRCIN1Q9C0H9 1055 aa20.11■□□□□ 0.81
CACNA1A-215ENST00000635727 TAF12Q16514 161 aa20.1■□□□□ 0.81
CACNA1A-215ENST00000635727 EP400NLQ6ZTU2 488 aa20.1■□□□□ 0.81
CACNA1A-215ENST00000635727 TMEM266Q2M3C6 531 aa20.1■□□□□ 0.81
CACNA1A-215ENST00000635727 FAM170AA1A519 330 aa20.1■□□□□ 0.81
CACNA1A-215ENST00000635727 ARID5AQ03989 594 aa20.1■□□□□ 0.81
CACNA1A-215ENST00000635727 WASF1Q92558 559 aa20.1■□□□□ 0.81
CACNA1A-215ENST00000635727 MCM2P49736 904 aa20.1■□□□□ 0.81
CACNA1A-215ENST00000635727 NAP1L3Q99457 506 aaPredicted RBP20.1■□□□□ 0.81
CACNA1A-215ENST00000635727 PRPF40BQ6NWY9 871 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-215ENST00000635727 JPH4Q96JJ6 628 aa20.1■□□□□ 0.81
CACNA1A-215ENST00000635727 SSRP1Q08945 709 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-215ENST00000635727 MAP3K11Q16584 847 aa20.09■□□□□ 0.81
CACNA1A-215ENST00000635727 FBF1Q8TES7 1133 aa20.09■□□□□ 0.81
CACNA1A-215ENST00000635727 PHACTR2O75167 634 aa20.09■□□□□ 0.81
CACNA1A-215ENST00000635727 SLC12A7Q9Y666 1083 aa20.09■□□□□ 0.81
CACNA1A-215ENST00000635727 SP4Q02446 784 aa20.09■□□□□ 0.81
CACNA1A-215ENST00000635727 GSTA5Q7RTV2 222 aa20.09■□□□□ 0.81
CACNA1A-215ENST00000635727 CCDC6Q16204 474 aa20.09■□□□□ 0.81
CACNA1A-215ENST00000635727 CCDC8Q9H0W5 538 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-215ENST00000635727 IRX5P78411 483 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-215ENST00000635727 CDK19Q9BWU1 502 aa20.09■□□□□ 0.81
CACNA1A-215ENST00000635727 NAA25Q14CX7 972 aa20.08■□□□□ 0.81
CACNA1A-215ENST00000635727 DAAM2Q86T65 1068 aa20.08■□□□□ 0.81
CACNA1A-215ENST00000635727 CNNM3Q8NE01 707 aa20.08■□□□□ 0.81
CACNA1A-215ENST00000635727 RFX1P22670 979 aa20.08■□□□□ 0.81
CACNA1A-215ENST00000635727 MRVI1Q9Y6F6 885 aa20.08■□□□□ 0.81
CACNA1A-215ENST00000635727 C16orf45Q96MC5 204 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-215ENST00000635727 PAFAH1B1P43034 410 aa20.07■□□□□ 0.8
CACNA1A-215ENST00000635727 SATB1Q01826 763 aa20.07■□□□□ 0.8
CACNA1A-215ENST00000635727 CTNNA3Q9UI47 895 aa20.07■□□□□ 0.8
CACNA1A-215ENST00000635727 STARD3NLO95772 234 aa20.07■□□□□ 0.8
CACNA1A-215ENST00000635727 TAOK3Q9H2K8 898 aa20.07■□□□□ 0.8
CACNA1A-215ENST00000635727 MAP9Q49MG5 647 aa20.07■□□□□ 0.8
CACNA1A-215ENST00000635727 UTP14AQ9BVJ6 771 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-215ENST00000635727 HAND2P61296 217 aa20.06■□□□□ 0.8
CACNA1A-215ENST00000635727 BBXQ8WY36 941 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-215ENST00000635727 BAG4O95429 457 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-215ENST00000635727 PFDN4Q9NQP4 134 aa20.06■□□□□ 0.8
CACNA1A-215ENST00000635727 ERCC5P28715 1186 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-215ENST00000635727 IFIT3O14879 490 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-215ENST00000635727 EEF2P13639 858 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-215ENST00000635727 FAM160A1Q05DH4 1040 aa20.06■□□□□ 0.8
CACNA1A-215ENST00000635727 CCDC65Q8IXS2 484 aa20.06■□□□□ 0.8
CACNA1A-215ENST00000635727 CLIP2Q9UDT6 1046 aa20.06■□□□□ 0.8
CACNA1A-215ENST00000635727 IFIT1P09914 478 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 ACTN2P35609 894 aa20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 ZNF287Q9HBT7 754 aa20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 TMOD3Q9NYL9 352 aa20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 TMC6Q7Z403 805 aa20.05■□□□□ 0.8
CACNA1A-215ENST00000635727 USO1O60763 962 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms