RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 XIRP1Q702N8 1843 aaKnown RBP15.25■□□□□ 0.03
PTPN11-205ENST00000635625 MCM4P33991 863 aa15.25■□□□□ 0.03
PTPN11-205ENST00000635625 HDAC5Q9UQL6 1122 aa15.25■□□□□ 0.03
PTPN11-205ENST00000635625 GCP02774 474 aa15.24■□□□□ 0.03
PTPN11-205ENST00000635625 SDSP20132 328 aa15.24■□□□□ 0.03
PTPN11-205ENST00000635625 EIF4A1P60842 406 aaKnown RBP15.24■□□□□ 0.03
PTPN11-205ENST00000635625 TEFQ10587 303 aa15.24■□□□□ 0.03
PTPN11-205ENST00000635625 EPB41L2O43491 1005 aaKnown RBP15.24■□□□□ 0.03
PTPN11-205ENST00000635625 RAB11FIP3O75154 756 aa15.24■□□□□ 0.03
PTPN11-205ENST00000635625 UBTFL1P0CB47 393 aaPredicted RBP15.24■□□□□ 0.03
PTPN11-205ENST00000635625 PDE1AP54750 535 aa15.24■□□□□ 0.03
PTPN11-205ENST00000635625 C1orf141Q5JVX7 400 aa15.24■□□□□ 0.03
PTPN11-205ENST00000635625 ZNF530Q6P9A1 599 aaPredicted RBP15.24■□□□□ 0.03
PTPN11-205ENST00000635625 SALL3Q9BXA9 1300 aa15.23■□□□□ 0.03
PTPN11-205ENST00000635625 PIP4K2BP78356 416 aa15.23■□□□□ 0.03
PTPN11-205ENST00000635625 L1TD1Q5T7N2 865 aaKnown RBP15.23■□□□□ 0.03
PTPN11-205ENST00000635625 GBP4Q96PP9 640 aa15.23■□□□□ 0.03
PTPN11-205ENST00000635625 USP26Q9BXU7 913 aa15.23■□□□□ 0.03
PTPN11-205ENST00000635625 ERC2O15083 957 aa15.22■□□□□ 0.03
PTPN11-205ENST00000635625 USHBP1Q8N6Y0 703 aa15.22■□□□□ 0.03
PTPN11-205ENST00000635625 C19orf44Q9H6X5 657 aa15.22■□□□□ 0.03
PTPN11-205ENST00000635625 STAP2Q9UGK3 403 aa15.22■□□□□ 0.03
PTPN11-205ENST00000635625 C16orf71Q8IYS4 520 aaPredicted RBP15.21■□□□□ 0.03
PTPN11-205ENST00000635625 SSH3Q8TE77 659 aa15.21■□□□□ 0.03
PTPN11-205ENST00000635625 SPOCK2Q92563 424 aa15.21■□□□□ 0.03
PTPN11-205ENST00000635625 HSP90AA1P07900 732 aaKnown RBP15.21■□□□□ 0.02
PTPN11-205ENST00000635625 HSP90AB4PQ58FF6 505 aa15.21■□□□□ 0.02
PTPN11-205ENST00000635625 ANKRD24Q8TF21 1146 aa15.21■□□□□ 0.02
PTPN11-205ENST00000635625 TMEM94Q12767 1356 aa15.21■□□□□ 0.02
PTPN11-205ENST00000635625 HEG1Q9ULI3 1381 aa15.21■□□□□ 0.02
PTPN11-205ENST00000635625 BTBD11A6QL63 1104 aa15.2■□□□□ 0.02
PTPN11-205ENST00000635625 RNMTO43148 476 aaKnown RBP15.2■□□□□ 0.02
PTPN11-205ENST00000635625 SMARCA5O60264 1052 aaPredicted RBP15.2■□□□□ 0.02
PTPN11-205ENST00000635625 MX1P20591 662 aa15.2■□□□□ 0.02
PTPN11-205ENST00000635625 RAB3GAP1Q15042 981 aa15.2■□□□□ 0.02
PTPN11-205ENST00000635625 PROSER2Q86WR7 435 aaPredicted RBP15.2■□□□□ 0.02
PTPN11-205ENST00000635625 OTUD7AQ8TE49 926 aaPredicted RBP15.2■□□□□ 0.02
PTPN11-205ENST00000635625 USP44Q9H0E7 712 aa15.2■□□□□ 0.02
PTPN11-205ENST00000635625 ISY1Q9ULR0 285 aaKnown RBP15.2■□□□□ 0.02
PTPN11-205ENST00000635625 LRRFIP2Q9Y608 721 aaKnown RBP15.2■□□□□ 0.02
PTPN11-205ENST00000635625 SCN11AQ9UI33 1791 aa15.2■□□□□ 0.02
PTPN11-205ENST00000635625 CRYBG1Q9Y4K1 1723 aa15.2■□□□□ 0.02
PTPN11-205ENST00000635625 PXDNQ92626 1479 aa15.19■□□□□ 0.02
PTPN11-205ENST00000635625 ST18O60284 1047 aa15.19■□□□□ 0.02
PTPN11-205ENST00000635625 KRT28Q7Z3Y7 464 aa15.19■□□□□ 0.02
PTPN11-205ENST00000635625 DBF4Q9UBU7 674 aaPredicted RBP15.19■□□□□ 0.02
PTPN11-205ENST00000635625 DNAAF4Q8WXU2 420 aa15.19■□□□□ 0.02
PTPN11-205ENST00000635625 ORAI2Q96SN7 254 aa15.19■□□□□ 0.02
PTPN11-205ENST00000635625 AK9Q5TCS8 1911 aa15.18■□□□□ 0.02
PTPN11-205ENST00000635625 TOM1O60784 492 aa15.18■□□□□ 0.02
PTPN11-205ENST00000635625 ALDH1L1O75891 902 aa15.18■□□□□ 0.02
PTPN11-205ENST00000635625 MCCP23508 829 aa15.18■□□□□ 0.02
PTPN11-205ENST00000635625 SKOR2Q2VWA4 1001 aaPredicted RBP15.18■□□□□ 0.02
PTPN11-205ENST00000635625 CLEC17AQ6ZS10 378 aa15.18■□□□□ 0.02
PTPN11-205ENST00000635625 RGPD5Q99666 1765 aa15.17■□□□□ 0.02
PTPN11-205ENST00000635625 MCM2P49736 904 aa15.17■□□□□ 0.02
PTPN11-205ENST00000635625 ANAPC15P60006 121 aa15.17■□□□□ 0.02
PTPN11-205ENST00000635625 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
PTPN11-205ENST00000635625 LGR6Q9HBX8 967 aa15.17■□□□□ 0.02
PTPN11-205ENST00000635625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.17■□□□□ 0.027e-7■■□□□ 12.5
PTPN11-205ENST00000635625 EXOC6BQ9Y2D4 811 aa15.17■□□□□ 0.02
PTPN11-205ENST00000635625 ERBB3P21860 1342 aa15.17■□□□□ 0.02
PTPN11-205ENST00000635625 COL18A1P39060 1754 aa15.16■□□□□ 0.02
PTPN11-205ENST00000635625 PNMA6EA0A0J9YXQ4 647 aa15.16■□□□□ 0.02
PTPN11-205ENST00000635625 APBB1O00213 710 aa15.16■□□□□ 0.02
PTPN11-205ENST00000635625 IL17RAQ96F46 866 aa15.16■□□□□ 0.02
PTPN11-205ENST00000635625 CWC22Q9HCG8 908 aaKnown RBP15.16■□□□□ 0.02
PTPN11-205ENST00000635625 PKD1L3Q7Z443 1732 aa15.16■□□□□ 0.02
PTPN11-205ENST00000635625 PARP4Q9UKK3 1724 aaKnown RBP15.16■□□□□ 0.02
PTPN11-205ENST00000635625 MRC1P22897 1456 aa15.16■□□□□ 0.02
PTPN11-205ENST00000635625 NUBP1P53384 320 aa15.16■□□□□ 0.02
PTPN11-205ENST00000635625 MTX1Q13505 466 aa15.16■□□□□ 0.02
PTPN11-205ENST00000635625 BEND3Q5T5X7 828 aa15.16■□□□□ 0.02
PTPN11-205ENST00000635625 NECTIN2Q92692 538 aa15.16■□□□□ 0.02
PTPN11-205ENST00000635625 LRRC59Q96AG4 307 aaKnown RBP15.16■□□□□ 0.02
PTPN11-205ENST00000635625 HYPKQ9NX55 129 aa15.16■□□□□ 0.02
PTPN11-205ENST00000635625 CHPF2Q9P2E5 772 aa15.16■□□□□ 0.02
PTPN11-205ENST00000635625 NUCB2P80303 420 aa15.15■□□□□ 0.02
PTPN11-205ENST00000635625 KIF1BPQ96EK5 621 aa15.15■□□□□ 0.02
PTPN11-205ENST00000635625 PHAXQ9H814 394 aaKnown RBP15.15■□□□□ 0.02
PTPN11-205ENST00000635625 ZBTB7CA1YPR0 619 aa15.14■□□□□ 0.01
PTPN11-205ENST00000635625 GOLGA6L22H0YM25 854 aa15.14■□□□□ 0.01
PTPN11-205ENST00000635625 TRAK2O60296 914 aa15.14■□□□□ 0.01
PTPN11-205ENST00000635625 ATF3P18847 181 aa15.14■□□□□ 0.01
PTPN11-205ENST00000635625 TNPO1Q92973 898 aaKnown RBP15.14■□□□□ 0.01
PTPN11-205ENST00000635625 ESYT1Q9BSJ8 1104 aa15.14■□□□□ 0.01
PTPN11-205ENST00000635625 ADCY9O60503 1353 aa15.14■□□□□ 0.01
PTPN11-205ENST00000635625 USP42Q9H9J4 1324 aaKnown RBP15.14■□□□□ 0.01
PTPN11-205ENST00000635625 TNS3Q68CZ2 1445 aa15.14■□□□□ 0.01
PTPN11-205ENST00000635625 GIGYF1O75420 1035 aaPredicted RBP15.13■□□□□ 0.01
PTPN11-205ENST00000635625 DDX58O95786 925 aaKnown RBP15.13■□□□□ 0.01
PTPN11-205ENST00000635625 EIF2S2P20042 333 aaKnown RBP15.13■□□□□ 0.01
PTPN11-205ENST00000635625 HSPA1LP34931 641 aa15.13■□□□□ 0.01
PTPN11-205ENST00000635625 MPRIPQ6WCQ1 1025 aa15.13■□□□□ 0.01
PTPN11-205ENST00000635625 NPHP3Q7Z494 1330 aa15.13■□□□□ 0.01
PTPN11-205ENST00000635625 CD2BP2O95400 341 aaKnown RBP15.13■□□□□ 0.01
PTPN11-205ENST00000635625 PPP1R42Q7Z4L9 355 aa15.13■□□□□ 0.01
PTPN11-205ENST00000635625 PI4KAP2A4QPH2 592 aa15.12■□□□□ 0.01
PTPN11-205ENST00000635625 KSR2Q6VAB6 950 aa15.12■□□□□ 0.01
PTPN11-205ENST00000635625 ERC1Q8IUD2 1116 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms