RNA–Protein interactions for RNA: ENST00000635614.1

CD55-211, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 1,145 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-211ENST00000635614 TTLL13PA6NNM8 815 aa13.96□□□□□ -0.17
CD55-211ENST00000635614 SIK1P57059 783 aa13.96□□□□□ -0.17
CD55-211ENST00000635614 AKAP4Q5JQC9 854 aa13.96□□□□□ -0.17
CD55-211ENST00000635614 ARXQ96QS3 562 aa13.96□□□□□ -0.17
CD55-211ENST00000635614 PLSCR2Q9NRY7 297 aa13.96□□□□□ -0.17
CD55-211ENST00000635614 ATP6V1AP38606 617 aa13.95□□□□□ -0.18
CD55-211ENST00000635614 PTGER2P43116 358 aa13.95□□□□□ -0.18
CD55-211ENST00000635614 EVX2Q03828 476 aa13.95□□□□□ -0.18
CD55-211ENST00000635614 PDGFDQ9GZP0 370 aaPredicted RBP13.95□□□□□ -0.18
CD55-211ENST00000635614 PNPLA7Q6ZV29 1317 aa13.94□□□□□ -0.18
CD55-211ENST00000635614 C5P01031 1676 aa13.94□□□□□ -0.18
CD55-211ENST00000635614 SSFA2P28290 1259 aa13.93□□□□□ -0.18
CD55-211ENST00000635614 KCNQ4P56696 695 aa13.93□□□□□ -0.18
CD55-211ENST00000635614 AEBP1Q8IUX7 1158 aa13.93□□□□□ -0.18
CD55-211ENST00000635614 ASAP1Q9ULH1 1129 aa13.93□□□□□ -0.18
CD55-211ENST00000635614 TOGARAM1Q9Y4F4 1720 aa13.93□□□□□ -0.18
CD55-211ENST00000635614 U2SURPO15042 1029 aaKnown RBP13.92□□□□□ -0.18
CD55-211ENST00000635614 GAS2L2Q8NHY3 880 aa13.92□□□□□ -0.18
CD55-211ENST00000635614 SYT17Q9BSW7 474 aa13.92□□□□□ -0.18
CD55-211ENST00000635614 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
CD55-211ENST00000635614 ATG3Q9NT62 314 aa13.92□□□□□ -0.18
CD55-211ENST00000635614 MAP3K5Q99683 1374 aa13.92□□□□□ -0.18
CD55-211ENST00000635614 NEFMP07197 916 aa13.91□□□□□ -0.18
CD55-211ENST00000635614 HMOX1P09601 288 aa13.91□□□□□ -0.18
CD55-211ENST00000635614 CLCN6P51797 869 aa13.91□□□□□ -0.18
CD55-211ENST00000635614 CNGB1Q14028 1251 aaPredicted RBP13.91□□□□□ -0.18
CD55-211ENST00000635614 RC3H1Q5TC82 1133 aaKnown RBP13.91□□□□□ -0.18
CD55-211ENST00000635614 COL23A1Q86Y22 540 aaPredicted RBP13.91□□□□□ -0.18
CD55-211ENST00000635614 FHDC1Q9C0D6 1143 aaPredicted RBP13.91□□□□□ -0.18
CD55-211ENST00000635614 TAF1LQ8IZX4 1826 aa13.91□□□□□ -0.18
CD55-211ENST00000635614 GALR2O43603 387 aaPredicted RBP13.9□□□□□ -0.18
CD55-211ENST00000635614 NFATC2IPQ8NCF5 419 aa13.9□□□□□ -0.18
CD55-211ENST00000635614 RTCBQ9Y3I0 505 aaKnown RBP13.9□□□□□ -0.18
CD55-211ENST00000635614 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
CD55-211ENST00000635614 ZNF831Q5JPB2 1677 aa13.89□□□□□ -0.19
CD55-211ENST00000635614 E2F4Q16254 413 aa13.89□□□□□ -0.19
CD55-211ENST00000635614 LHX8Q68G74 356 aa13.89□□□□□ -0.19
CD55-211ENST00000635614 PNNQ9H307 717 aaKnown RBP13.89□□□□□ -0.19
CD55-211ENST00000635614 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
CD55-211ENST00000635614 PDE4AP27815 886 aa13.88□□□□□ -0.19
CD55-211ENST00000635614 TRAPPC3LQ5T215 181 aa13.88□□□□□ -0.19
CD55-211ENST00000635614 ARHGEF1Q92888 912 aaKnown RBP13.88□□□□□ -0.19
CD55-211ENST00000635614 SLC52A2Q9HAB3 445 aa13.88□□□□□ -0.19
CD55-211ENST00000635614 GNAT3A8MTJ3 354 aa13.87□□□□□ -0.19
CD55-211ENST00000635614 GNPATO15228 680 aa13.87□□□□□ -0.19
CD55-211ENST00000635614 RNMTO43148 476 aaKnown RBP13.87□□□□□ -0.19
CD55-211ENST00000635614 FCHSD2O94868 740 aa13.87□□□□□ -0.19
CD55-211ENST00000635614 PPP2R1AP30153 589 aa13.87□□□□□ -0.19
CD55-211ENST00000635614 CRISPLD2Q9H0B8 497 aa13.87□□□□□ -0.19
CD55-211ENST00000635614 KDM6AO15550 1401 aaPredicted RBP13.87□□□□□ -0.19
CD55-211ENST00000635614 SCN11AQ9UI33 1791 aa13.86□□□□□ -0.19
CD55-211ENST00000635614 TUBGCP6Q96RT7 1819 aa13.86□□□□□ -0.19
CD55-211ENST00000635614 ZEB1P37275 1124 aaPredicted RBP13.86□□□□□ -0.19
CD55-211ENST00000635614 TEFQ10587 303 aa13.86□□□□□ -0.19
CD55-211ENST00000635614 MFSD10Q14728 455 aa13.86□□□□□ -0.19
CD55-211ENST00000635614 MTHFSDQ2M296 383 aaKnown RBP13.86□□□□□ -0.19
CD55-211ENST00000635614 LINC00116Q8NCU8 138 aa13.86□□□□□ -0.19
CD55-211ENST00000635614 COL24A1Q17RW2 1714 aa13.86□□□□□ -0.19
CD55-211ENST00000635614 CNTNAP4Q9C0A0 1308 aa13.86□□□□□ -0.19
CD55-211ENST00000635614 PHF14O94880 888 aa13.85□□□□□ -0.19
CD55-211ENST00000635614 U2AF1L5P0DN76 240 aaPredicted RBP13.85□□□□□ -0.19
CD55-211ENST00000635614 U2AF1Q01081 240 aaKnown RBP eCLIP13.85□□□□□ -0.194e-9■■□□□ 13.6
CD55-211ENST00000635614 ITPK1Q13572 414 aa13.85□□□□□ -0.19
CD55-211ENST00000635614 TTC5Q8N0Z6 440 aa13.85□□□□□ -0.19
CD55-211ENST00000635614 NLGN1Q8N2Q7 840 aa13.85□□□□□ -0.19
CD55-211ENST00000635614 LARP6Q9BRS8 491 aaKnown RBP13.85□□□□□ -0.19
CD55-211ENST00000635614 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
CD55-211ENST00000635614 CD2APQ9Y5K6 639 aa13.85□□□□□ -0.19
CD55-211ENST00000635614 PTCD1O75127 700 aaKnown RBP13.84□□□□□ -0.19
CD55-211ENST00000635614 RPS6KA4O75676 772 aa13.84□□□□□ -0.19
CD55-211ENST00000635614 RFC4P35249 363 aa13.84□□□□□ -0.19
CD55-211ENST00000635614 RALBP1Q15311 655 aa13.84□□□□□ -0.19
CD55-211ENST00000635614 RTF1Q92541 710 aaKnown RBP13.84□□□□□ -0.19
CD55-211ENST00000635614 TEX13AQ9BXU3 409 aaPredicted RBP13.84□□□□□ -0.19
CD55-211ENST00000635614 UBR3Q6ZT12 1888 aa13.84□□□□□ -0.19
CD55-211ENST00000635614 COL3A1P02461 1466 aaPredicted RBP13.83□□□□□ -0.2
CD55-211ENST00000635614 YY1P25490 414 aa13.83□□□□□ -0.2
CD55-211ENST00000635614 GPR162Q16538 588 aa13.83□□□□□ -0.2
CD55-211ENST00000635614 LGR6Q9HBX8 967 aa13.83□□□□□ -0.2
CD55-211ENST00000635614 HTATSF1O43719 755 aaKnown RBP13.82□□□□□ -0.2
CD55-211ENST00000635614 GRIN3BO60391 1043 aa13.82□□□□□ -0.2
CD55-211ENST00000635614 PRKAR2BP31323 418 aa13.82□□□□□ -0.2
CD55-211ENST00000635614 STARD3NLO95772 234 aa13.81□□□□□ -0.2
CD55-211ENST00000635614 MSL1Q68DK7 614 aa13.81□□□□□ -0.2
CD55-211ENST00000635614 NPM2Q86SE8 214 aaKnown RBP13.81□□□□□ -0.2
CD55-211ENST00000635614 RSPH6AQ9H0K4 717 aa13.81□□□□□ -0.2
CD55-211ENST00000635614 MRC1P22897 1456 aa13.8□□□□□ -0.2
CD55-211ENST00000635614 CRKLP46109 303 aaKnown RBP13.8□□□□□ -0.2
CD55-211ENST00000635614 VIRMAQ69YN4 1812 aaKnown RBP13.79□□□□□ -0.2
CD55-211ENST00000635614 DDX27Q96GQ7 796 aaKnown RBP13.79□□□□□ -0.2
CD55-211ENST00000635614 SLC4A9Q96Q91 983 aa13.79□□□□□ -0.2
CD55-211ENST00000635614 COL5A3P25940 1745 aaPredicted RBP13.78□□□□□ -0.2
CD55-211ENST00000635614 ZPR1O75312 459 aa13.78□□□□□ -0.2
CD55-211ENST00000635614 ZNF790Q6PG37 636 aa13.78□□□□□ -0.2
CD55-211ENST00000635614 CCDC87Q9NVE4 849 aa13.78□□□□□ -0.2
CD55-211ENST00000635614 PARP3Q9Y6F1 533 aa13.78□□□□□ -0.2
CD55-211ENST00000635614 CICQ96RK0 1608 aaPredicted RBP13.78□□□□□ -0.2
CD55-211ENST00000635614 ADAMTS7Q9UKP4 1686 aa13.78□□□□□ -0.2
CD55-211ENST00000635614 A0A087WZG4 1122 aa13.77□□□□□ -0.21
CD55-211ENST00000635614 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms