RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 ZSCAN30Q86W11 494 aa12.99□□□□□ -0.33
PSPC1-207ENST00000635251 RHPN1Q8TCX5 695 aa12.99□□□□□ -0.33
PSPC1-207ENST00000635251 SYCE3A1L190 88 aa12.98□□□□□ -0.33
PSPC1-207ENST00000635251 TMEM63CQ9P1W3 806 aa12.98□□□□□ -0.33
PSPC1-207ENST00000635251 LRSAM1Q6UWE0 723 aa12.97□□□□□ -0.33
PSPC1-207ENST00000635251 KIF1BPQ96EK5 621 aa12.97□□□□□ -0.33
PSPC1-207ENST00000635251 TUBGCP6Q96RT7 1819 aa12.97□□□□□ -0.33
PSPC1-207ENST00000635251 EIF4A1P60842 406 aaKnown RBP12.97□□□□□ -0.33
PSPC1-207ENST00000635251 OS9Q13438 667 aaPredicted RBP12.97□□□□□ -0.33
PSPC1-207ENST00000635251 POLA2Q14181 598 aa12.97□□□□□ -0.33
PSPC1-207ENST00000635251 CNTROBQ8N137 903 aa12.97□□□□□ -0.33
PSPC1-207ENST00000635251 DNAAF4Q8WXU2 420 aa12.97□□□□□ -0.33
PSPC1-207ENST00000635251 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
PSPC1-207ENST00000635251 CHPF2Q9P2E5 772 aa12.97□□□□□ -0.33
PSPC1-207ENST00000635251 NSFL1CQ9UNZ2 370 aaKnown RBP12.97□□□□□ -0.33
PSPC1-207ENST00000635251 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.33
PSPC1-207ENST00000635251 HSPA4P34932 840 aa12.96□□□□□ -0.33
PSPC1-207ENST00000635251 FOXD4L6Q3SYB3 417 aaPredicted RBP12.96□□□□□ -0.33
PSPC1-207ENST00000635251 FOXD4L3Q6VB84 417 aaPredicted RBP12.96□□□□□ -0.33
PSPC1-207ENST00000635251 CHMP4AQ9BY43 222 aa12.96□□□□□ -0.33
PSPC1-207ENST00000635251 IL25Q9H293 177 aa12.96□□□□□ -0.33
PSPC1-207ENST00000635251 PHF8Q9UPP1 1060 aa12.96□□□□□ -0.33
PSPC1-207ENST00000635251 PI4KAP2A4QPH2 592 aa12.96□□□□□ -0.34
PSPC1-207ENST00000635251 EPB41L2O43491 1005 aaKnown RBP12.96□□□□□ -0.34
PSPC1-207ENST00000635251 TEFQ10587 303 aa12.96□□□□□ -0.34
PSPC1-207ENST00000635251 KIAA1211Q6ZU35 1233 aa12.96□□□□□ -0.34
PSPC1-207ENST00000635251 PI4KAP1Q8N8J0 262 aa12.96□□□□□ -0.34
PSPC1-207ENST00000635251 N4BP2Q86UW6 1770 aaPredicted RBP12.95□□□□□ -0.34
PSPC1-207ENST00000635251 CACNA1FO60840 1977 aa12.95□□□□□ -0.34
PSPC1-207ENST00000635251 HSP90AB4PQ58FF6 505 aa12.95□□□□□ -0.34
PSPC1-207ENST00000635251 NBPF6Q5VWK0 638 aa12.95□□□□□ -0.34
PSPC1-207ENST00000635251 PI4K2BQ8TCG2 481 aa12.95□□□□□ -0.34
PSPC1-207ENST00000635251 IP6K1Q92551 441 aa12.95□□□□□ -0.34
PSPC1-207ENST00000635251 NBPF4Q96M43 638 aa12.95□□□□□ -0.34
PSPC1-207ENST00000635251 MARF1Q9Y4F3 1742 aaKnown RBP12.95□□□□□ -0.34
PSPC1-207ENST00000635251 BTBD11A6QL63 1104 aa12.95□□□□□ -0.34
PSPC1-207ENST00000635251 BEND3Q5T5X7 828 aa12.95□□□□□ -0.34
PSPC1-207ENST00000635251 SYAP1Q96A49 352 aaPredicted RBP12.95□□□□□ -0.34
PSPC1-207ENST00000635251 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
PSPC1-207ENST00000635251 SGSM2O43147 1006 aa12.94□□□□□ -0.34
PSPC1-207ENST00000635251 ANXA1P04083 346 aa12.94□□□□□ -0.34
PSPC1-207ENST00000635251 HOXB7P09629 217 aa12.94□□□□□ -0.34
PSPC1-207ENST00000635251 IL17RAQ96F46 866 aa12.94□□□□□ -0.34
PSPC1-207ENST00000635251 RAD50Q92878 1312 aa12.94□□□□□ -0.34
PSPC1-207ENST00000635251 WDR33Q9C0J8 1336 aaKnown RBP12.94□□□□□ -0.34
PSPC1-207ENST00000635251 KCNQ3O43525 872 aa12.93□□□□□ -0.34
PSPC1-207ENST00000635251 ZNF530Q6P9A1 599 aaPredicted RBP12.93□□□□□ -0.34
PSPC1-207ENST00000635251 HS1BP3Q53T59 392 aa12.93□□□□□ -0.34
PSPC1-207ENST00000635251 CWC27Q6UX04 472 aaKnown RBP12.93□□□□□ -0.34
PSPC1-207ENST00000635251 SNX14Q9Y5W7 946 aa12.93□□□□□ -0.34
PSPC1-207ENST00000635251 PSME1Q06323 249 aa12.92□□□□□ -0.34
PSPC1-207ENST00000635251 RNF214Q8ND24 703 aa12.92□□□□□ -0.34
PSPC1-207ENST00000635251 GDPD2Q9HCC8 539 aa12.92□□□□□ -0.34
PSPC1-207ENST00000635251 USP54Q70EL1 1684 aa12.92□□□□□ -0.34
PSPC1-207ENST00000635251 LTN1O94822 1766 aa12.92□□□□□ -0.34
PSPC1-207ENST00000635251 PLEKHO1Q53GL0 409 aaPredicted RBP12.92□□□□□ -0.34
PSPC1-207ENST00000635251 AKAP4Q5JQC9 854 aa12.92□□□□□ -0.34
PSPC1-207ENST00000635251 MPRIPQ6WCQ1 1025 aa12.92□□□□□ -0.34
PSPC1-207ENST00000635251 RBM33Q96EV2 1170 aaKnown RBP12.92□□□□□ -0.34
PSPC1-207ENST00000635251 DIAPH3Q9NSV4 1193 aa12.92□□□□□ -0.34
PSPC1-207ENST00000635251 C9orf78Q9NZ63 289 aaPredicted RBP12.92□□□□□ -0.34
PSPC1-207ENST00000635251 CLASRPQ8N2M8 674 aaKnown RBP12.91□□□□□ -0.34
PSPC1-207ENST00000635251 LRRC59Q96AG4 307 aaKnown RBP12.91□□□□□ -0.34
PSPC1-207ENST00000635251 PDLIM2Q96JY6 352 aa12.91□□□□□ -0.34
PSPC1-207ENST00000635251 LSG1Q9H089 658 aaKnown RBP12.91□□□□□ -0.34
PSPC1-207ENST00000635251 TSPY26PQ9H489 355 aa12.91□□□□□ -0.34
PSPC1-207ENST00000635251 SPG7Q9UQ90 795 aa12.91□□□□□ -0.34
PSPC1-207ENST00000635251 GLRX3O76003 335 aaKnown RBP12.91□□□□□ -0.34
PSPC1-207ENST00000635251 ESCO1Q5FWF5 840 aa12.91□□□□□ -0.34
PSPC1-207ENST00000635251 C1orf141Q5JVX7 400 aa12.91□□□□□ -0.34
PSPC1-207ENST00000635251 USP48Q86UV5 1035 aa12.91□□□□□ -0.34
PSPC1-207ENST00000635251 KCNH5Q8NCM2 988 aa12.91□□□□□ -0.34
PSPC1-207ENST00000635251 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
PSPC1-207ENST00000635251 DBF4Q9UBU7 674 aaPredicted RBP12.91□□□□□ -0.34
PSPC1-207ENST00000635251 FER1L4A9Z1Z3 1794 aa12.91□□□□□ -0.34
PSPC1-207ENST00000635251 TTC41PQ6P2S7 1318 aa12.91□□□□□ -0.34
PSPC1-207ENST00000635251 PHF14O94880 888 aa12.9□□□□□ -0.34
PSPC1-207ENST00000635251 AK2P54819 239 aa12.9□□□□□ -0.34
PSPC1-207ENST00000635251 LARP6Q9BRS8 491 aaKnown RBP12.9□□□□□ -0.34
PSPC1-207ENST00000635251 NOL7Q9UMY1 257 aaKnown RBP12.9□□□□□ -0.34
PSPC1-207ENST00000635251 ADCY9O60503 1353 aa12.9□□□□□ -0.34
PSPC1-207ENST00000635251 GADD45BO75293 160 aaPredicted RBP12.9□□□□□ -0.35
PSPC1-207ENST00000635251 TPM2P07951 284 aa12.9□□□□□ -0.35
PSPC1-207ENST00000635251 IFIT2P09913 472 aaKnown RBP12.9□□□□□ -0.35
PSPC1-207ENST00000635251 KCNA4P22459 653 aa12.9□□□□□ -0.35
PSPC1-207ENST00000635251 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.35
PSPC1-207ENST00000635251 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.9□□□□□ -0.35
PSPC1-207ENST00000635251 RASEFQ8IZ41 740 aa12.9□□□□□ -0.35
PSPC1-207ENST00000635251 GPATCH3Q96I76 525 aa12.9□□□□□ -0.35
PSPC1-207ENST00000635251 LIMCH1Q9UPQ0 1083 aa12.9□□□□□ -0.35
PSPC1-207ENST00000635251 MAP3K2Q9Y2U5 619 aa12.9□□□□□ -0.35
PSPC1-207ENST00000635251 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.9□□□□□ -0.35
PSPC1-207ENST00000635251 MED1Q15648 1581 aaPredicted RBP12.89□□□□□ -0.35
PSPC1-207ENST00000635251 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
PSPC1-207ENST00000635251 RNMTO43148 476 aaKnown RBP12.88□□□□□ -0.35
PSPC1-207ENST00000635251 OFD1O75665 1012 aa12.88□□□□□ -0.35
PSPC1-207ENST00000635251 CASTP20810 708 aaKnown RBP12.88□□□□□ -0.35
PSPC1-207ENST00000635251 AMOTQ4VCS5 1084 aa12.88□□□□□ -0.35
PSPC1-207ENST00000635251 TTC14Q96N46 770 aa12.88□□□□□ -0.35
PSPC1-207ENST00000635251 ECHDC1Q9NTX5 307 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms