RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 SIRT2Q8IXJ6 389 aa17.85■□□□□ 0.45
LIMS4-204ENST00000632897 NECTIN2Q92692 538 aa17.85■□□□□ 0.45
LIMS4-204ENST00000632897 F6X3S4 739 aa17.84■□□□□ 0.45
LIMS4-204ENST00000632897 EIF2S2P20042 333 aaKnown RBP17.83■□□□□ 0.45
LIMS4-204ENST00000632897 CHD1LQ86WJ1 897 aa17.83■□□□□ 0.45
LIMS4-204ENST00000632897 ZCRB1Q8TBF4 217 aaKnown RBP17.83■□□□□ 0.45
LIMS4-204ENST00000632897 MEIS3Q99687 375 aa17.83■□□□□ 0.45
LIMS4-204ENST00000632897 DBF4Q9UBU7 674 aaPredicted RBP17.83■□□□□ 0.45
LIMS4-204ENST00000632897 GNAI3P08754 354 aa17.82■□□□□ 0.44
LIMS4-204ENST00000632897 IL2RBP14784 551 aa17.82■□□□□ 0.44
LIMS4-204ENST00000632897 EVA1CP58658 441 aa17.82■□□□□ 0.44
LIMS4-204ENST00000632897 CEP85Q6P2H3 762 aa17.82■□□□□ 0.44
LIMS4-204ENST00000632897 ZNF790Q6PG37 636 aa17.82■□□□□ 0.44
LIMS4-204ENST00000632897 CHPF2Q9P2E5 772 aa17.82■□□□□ 0.44
LIMS4-204ENST00000632897 DCTPP1Q9H773 170 aa17.81■□□□□ 0.44
LIMS4-204ENST00000632897 EP400Q96L91 3159 aa17.8■□□□□ 0.44
LIMS4-204ENST00000632897 HMMRO75330 724 aa17.8■□□□□ 0.44
LIMS4-204ENST00000632897 GNAI2P04899 355 aa17.8■□□□□ 0.44
LIMS4-204ENST00000632897 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
LIMS4-204ENST00000632897 FAM98CQ17RN3 349 aaKnown RBP17.8■□□□□ 0.44
LIMS4-204ENST00000632897 LARP1Q6PKG0 1096 aaKnown RBP17.8■□□□□ 0.44
LIMS4-204ENST00000632897 NFATC2IPQ8NCF5 419 aa17.8■□□□□ 0.44
LIMS4-204ENST00000632897 PHAXQ9H814 394 aaKnown RBP17.8■□□□□ 0.44
LIMS4-204ENST00000632897 SPATA31A5Q5VU36 1347 aa17.79■□□□□ 0.44
LIMS4-204ENST00000632897 SPATA31A7Q8IWB4 1347 aa17.79■□□□□ 0.44
LIMS4-204ENST00000632897 CABP4P57796 275 aa17.79■□□□□ 0.44
LIMS4-204ENST00000632897 STRN4Q9NRL3 753 aa17.79■□□□□ 0.44
LIMS4-204ENST00000632897 HYPKQ9NX55 129 aa17.79■□□□□ 0.44
LIMS4-204ENST00000632897 SHANK3Q9BYB0 1731 aa17.79■□□□□ 0.44
LIMS4-204ENST00000632897 ERVV-2B6SEH9 535 aa17.78■□□□□ 0.44
LIMS4-204ENST00000632897 ANKRD45Q5TZF3 282 aa17.78■□□□□ 0.44
LIMS4-204ENST00000632897 TTC5Q8N0Z6 440 aa17.78■□□□□ 0.44
LIMS4-204ENST00000632897 BAG6P46379 1132 aa17.77■□□□□ 0.44
LIMS4-204ENST00000632897 DNAAF4Q8WXU2 420 aa17.77■□□□□ 0.44
LIMS4-204ENST00000632897 IPO9Q96P70 1041 aaKnown RBP17.77■□□□□ 0.44
LIMS4-204ENST00000632897 LNPKQ9C0E8 428 aa17.77■□□□□ 0.44
LIMS4-204ENST00000632897 DDX21Q9NR30 783 aaKnown RBP eCLIP17.77■□□□□ 0.44
LIMS4-204ENST00000632897 C5P01031 1676 aa17.77■□□□□ 0.44
LIMS4-204ENST00000632897 THSD7AQ9UPZ6 1657 aa17.77■□□□□ 0.44
LIMS4-204ENST00000632897 FMNL2Q96PY5 1086 aa17.76■□□□□ 0.43
LIMS4-204ENST00000632897 SRCIN1Q9C0H9 1055 aa17.76■□□□□ 0.43
LIMS4-204ENST00000632897 SNRPA1P09661 255 aaKnown RBP17.75■□□□□ 0.43
LIMS4-204ENST00000632897 SLC39A6Q13433 755 aa17.75■□□□□ 0.43
LIMS4-204ENST00000632897 DDX58O95786 925 aaKnown RBP17.75■□□□□ 0.43
LIMS4-204ENST00000632897 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
LIMS4-204ENST00000632897 ZBTB47Q9UFB7 747 aaPredicted RBP17.75■□□□□ 0.43
LIMS4-204ENST00000632897 ADCY9O60503 1353 aa17.75■□□□□ 0.43
LIMS4-204ENST00000632897 LAMB4A4D0S4 1761 aa17.75■□□□□ 0.43
LIMS4-204ENST00000632897 PAPPAQ13219 1627 aa17.74■□□□□ 0.43
LIMS4-204ENST00000632897 SPATA31A1Q5TZJ5 1347 aa17.74■□□□□ 0.43
LIMS4-204ENST00000632897 IBTKQ9P2D0 1353 aaPredicted RBP17.74■□□□□ 0.43
LIMS4-204ENST00000632897 PI4KAP2A4QPH2 592 aa17.74■□□□□ 0.43
LIMS4-204ENST00000632897 MSH5O43196 834 aa17.74■□□□□ 0.43
LIMS4-204ENST00000632897 BEND3Q5T5X7 828 aa17.74■□□□□ 0.43
LIMS4-204ENST00000632897 KSR2Q6VAB6 950 aa17.74■□□□□ 0.43
LIMS4-204ENST00000632897 PI4KAP1Q8N8J0 262 aa17.74■□□□□ 0.43
LIMS4-204ENST00000632897 DDRGK1Q96HY6 314 aa17.74■□□□□ 0.43
LIMS4-204ENST00000632897 ZNF496Q96IT1 587 aaPredicted RBP17.74■□□□□ 0.43
LIMS4-204ENST00000632897 DISP2A7MBM2 1401 aa17.73■□□□□ 0.43
LIMS4-204ENST00000632897 PRAMEF22A3QJZ6 481 aa17.73■□□□□ 0.43
LIMS4-204ENST00000632897 ALDH1L1O75891 902 aa17.73■□□□□ 0.43
LIMS4-204ENST00000632897 UBTFL1P0CB47 393 aaPredicted RBP17.73■□□□□ 0.43
LIMS4-204ENST00000632897 USP44Q9H0E7 712 aa17.73■□□□□ 0.43
LIMS4-204ENST00000632897 UBR2Q8IWV8 1755 aa17.73■□□□□ 0.43
LIMS4-204ENST00000632897 ATP8B2P98198 1209 aa17.72■□□□□ 0.43
LIMS4-204ENST00000632897 PROSER3Q2NL68 480 aa17.72■□□□□ 0.43
LIMS4-204ENST00000632897 ANXA1P04083 346 aa17.71■□□□□ 0.43
LIMS4-204ENST00000632897 PDIA6Q15084 440 aa17.71■□□□□ 0.43
LIMS4-204ENST00000632897 BMP2KLQ5H9B9 411 aa17.71■□□□□ 0.43
LIMS4-204ENST00000632897 DEFB132Q7Z7B7 95 aa17.71■□□□□ 0.43
LIMS4-204ENST00000632897 ERBB4Q15303 1308 aa17.71■□□□□ 0.43
LIMS4-204ENST00000632897 HDAC5Q9UQL6 1122 aa17.7■□□□□ 0.42
LIMS4-204ENST00000632897 WNK3Q9BYP7 1800 aa17.7■□□□□ 0.42
LIMS4-204ENST00000632897 TNS2Q63HR2 1409 aa17.7■□□□□ 0.42
LIMS4-204ENST00000632897 BARGINQ6ZT62 677 aa17.69■□□□□ 0.42
LIMS4-204ENST00000632897 DDX54Q8TDD1 881 aaKnown RBP17.69■□□□□ 0.42
LIMS4-204ENST00000632897 UPF2Q9HAU5 1272 aaKnown RBP17.69■□□□□ 0.42
LIMS4-204ENST00000632897 MAP3K2Q9Y2U5 619 aa17.69■□□□□ 0.42
LIMS4-204ENST00000632897 THRAP3Q9Y2W1 955 aaKnown RBP17.69■□□□□ 0.42
LIMS4-204ENST00000632897 LRRFIP2Q9Y608 721 aaKnown RBP17.69■□□□□ 0.42
LIMS4-204ENST00000632897 FAM196AQ6ZSG2 479 aa17.69■□□□□ 0.42
LIMS4-204ENST00000632897 KCPQ6ZWJ8 1503 aa17.68■□□□□ 0.42
LIMS4-204ENST00000632897 TOGARAM1Q9Y4F4 1720 aa17.68■□□□□ 0.42
LIMS4-204ENST00000632897 LINS1Q8NG48 757 aa17.68■□□□□ 0.42
LIMS4-204ENST00000632897 NOP58Q9Y2X3 529 aaKnown RBP17.68■□□□□ 0.42
LIMS4-204ENST00000632897 CDCA7Q9BWT1 371 aaPredicted RBP17.67■□□□□ 0.42
LIMS4-204ENST00000632897 TNS1Q9HBL0 1735 aaKnown RBP17.67■□□□□ 0.42
LIMS4-204ENST00000632897 PLEKHM2Q8IWE5 1019 aa17.66■□□□□ 0.42
LIMS4-204ENST00000632897 SSH3Q8TE77 659 aa17.66■□□□□ 0.42
LIMS4-204ENST00000632897 USP35Q9P2H5 1018 aa17.66■□□□□ 0.42
LIMS4-204ENST00000632897 USP16Q9Y5T5 823 aa17.66■□□□□ 0.42
LIMS4-204ENST00000632897 POLA2Q14181 598 aa17.65■□□□□ 0.42
LIMS4-204ENST00000632897 ERICH6Q7L0X2 663 aa17.65■□□□□ 0.42
LIMS4-204ENST00000632897 LRP10Q7Z4F1 713 aa17.65■□□□□ 0.42
LIMS4-204ENST00000632897 PNMA6EA0A0J9YXQ4 647 aa17.64■□□□□ 0.41
LIMS4-204ENST00000632897 EIF5BO60841 1220 aaKnown RBP17.64■□□□□ 0.41
LIMS4-204ENST00000632897 SEC24BO95487 1268 aa17.64■□□□□ 0.41
LIMS4-204ENST00000632897 XAGE3Q8WTP9 111 aa17.64■□□□□ 0.41
LIMS4-204ENST00000632897 TMOD3Q9NYL9 352 aa17.64■□□□□ 0.41
LIMS4-204ENST00000632897 UTYO14607 1347 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms