RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 TEX13AQ9BXU3 409 aaPredicted RBP18.94■□□□□ 0.62
LIMS4-203ENST00000632758 NOB1Q9ULX3 412 aaKnown RBP18.93■□□□□ 0.62
LIMS4-203ENST00000632758 C5P01031 1676 aa18.93■□□□□ 0.62
LIMS4-203ENST00000632758 BRPF1P55201 1214 aaPredicted RBP18.93■□□□□ 0.62
LIMS4-203ENST00000632758 PHAXQ9H814 394 aaKnown RBP18.93■□□□□ 0.62
LIMS4-203ENST00000632758 DBF4Q9UBU7 674 aaPredicted RBP18.93■□□□□ 0.62
LIMS4-203ENST00000632758 CCNL1Q9UK58 526 aaPredicted RBP18.93■□□□□ 0.62
LIMS4-203ENST00000632758 RNF123Q5XPI4 1314 aa18.92■□□□□ 0.62
LIMS4-203ENST00000632758 NBPF26B4DH59 902 aa18.92■□□□□ 0.62
LIMS4-203ENST00000632758 STARD3NLO95772 234 aa18.92■□□□□ 0.62
LIMS4-203ENST00000632758 MYL6BP14649 208 aa18.92■□□□□ 0.62
LIMS4-203ENST00000632758 RRP1P56182 461 aaKnown RBP18.92■□□□□ 0.62
LIMS4-203ENST00000632758 NBPF14Q5TI25 921 aa18.92■□□□□ 0.62
LIMS4-203ENST00000632758 NBPF10Q6P3W6 841 aaKnown RBP18.92■□□□□ 0.62
LIMS4-203ENST00000632758 PROM2Q8N271 834 aa18.92■□□□□ 0.62
LIMS4-203ENST00000632758 NBPF15Q8N660 670 aa18.92■□□□□ 0.62
LIMS4-203ENST00000632758 CHMP4AQ9BY43 222 aa18.92■□□□□ 0.62
LIMS4-203ENST00000632758 DDX21Q9NR30 783 aaKnown RBP eCLIP18.92■□□□□ 0.62
LIMS4-203ENST00000632758 LRRC4BQ9NT99 713 aa18.92■□□□□ 0.62
LIMS4-203ENST00000632758 LINC00116Q8NCU8 138 aa18.91■□□□□ 0.62
LIMS4-203ENST00000632758 TNNQ9UQP3 1299 aa18.91■□□□□ 0.62
LIMS4-203ENST00000632758 PLSCR1O15162 318 aa18.9■□□□□ 0.62
LIMS4-203ENST00000632758 TXNRD1Q16881 649 aa18.89■□□□□ 0.62
LIMS4-203ENST00000632758 LRP10Q7Z4F1 713 aa18.89■□□□□ 0.62
LIMS4-203ENST00000632758 CANXP27824 592 aaKnown RBP18.89■□□□□ 0.61
LIMS4-203ENST00000632758 CRKLP46109 303 aaKnown RBP18.89■□□□□ 0.61
LIMS4-203ENST00000632758 INTS5Q6P9B9 1019 aaKnown RBP18.89■□□□□ 0.61
LIMS4-203ENST00000632758 ZBTB1Q9Y2K1 713 aa18.89■□□□□ 0.61
LIMS4-203ENST00000632758 FLIIQ13045 1269 aa18.88■□□□□ 0.61
LIMS4-203ENST00000632758 C20orf194Q5TEA3 1177 aa18.88■□□□□ 0.61
LIMS4-203ENST00000632758 HYPKQ9NX55 129 aa18.88■□□□□ 0.61
LIMS4-203ENST00000632758 TJP1Q07157 1748 aa18.87■□□□□ 0.61
LIMS4-203ENST00000632758 IRX6P78412 446 aaPredicted RBP18.87■□□□□ 0.61
LIMS4-203ENST00000632758 AIMP1Q12904 312 aaKnown RBP18.87■□□□□ 0.61
LIMS4-203ENST00000632758 ZKSCAN2Q63HK3 967 aa18.87■□□□□ 0.61
LIMS4-203ENST00000632758 ERBB4Q15303 1308 aa18.87■□□□□ 0.61
LIMS4-203ENST00000632758 KIF16BQ96L93 1317 aa18.87■□□□□ 0.61
LIMS4-203ENST00000632758 EN1Q05925 392 aaPredicted RBP18.86■□□□□ 0.61
LIMS4-203ENST00000632758 COPS6Q7L5N1 327 aa18.86■□□□□ 0.61
LIMS4-203ENST00000632758 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.86■□□□□ 0.61
LIMS4-203ENST00000632758 CLUAP1Q96AJ1 413 aa18.86■□□□□ 0.61
LIMS4-203ENST00000632758 CCDC87Q9NVE4 849 aa18.86■□□□□ 0.61
LIMS4-203ENST00000632758 IPO8O15397 1037 aaKnown RBP18.85■□□□□ 0.61
LIMS4-203ENST00000632758 TRIM27P14373 513 aa18.85■□□□□ 0.61
LIMS4-203ENST00000632758 SLC27A3Q5K4L6 730 aa18.85■□□□□ 0.61
LIMS4-203ENST00000632758 ATF7IPQ6VMQ6 1270 aa18.85■□□□□ 0.61
LIMS4-203ENST00000632758 XAGE3Q8WTP9 111 aa18.85■□□□□ 0.61
LIMS4-203ENST00000632758 LY75O60449 1722 aa18.85■□□□□ 0.61
LIMS4-203ENST00000632758 FKBP5Q13451 457 aaPredicted RBP18.85■□□□□ 0.61
LIMS4-203ENST00000632758 EZH2Q15910 746 aaKnown RBP18.85■□□□□ 0.61
LIMS4-203ENST00000632758 SMIM5Q71RC9 77 aa18.85■□□□□ 0.61
LIMS4-203ENST00000632758 DEFB132Q7Z7B7 95 aa18.85■□□□□ 0.61
LIMS4-203ENST00000632758 ARHGAP45Q92619 1136 aa18.85■□□□□ 0.61
LIMS4-203ENST00000632758 ZNF330Q9Y3S2 320 aaPredicted RBP18.85■□□□□ 0.61
LIMS4-203ENST00000632758 LAMB4A4D0S4 1761 aa18.84■□□□□ 0.61
LIMS4-203ENST00000632758 F6X3S4 739 aa18.84■□□□□ 0.61
LIMS4-203ENST00000632758 RLBP1P12271 317 aa18.84■□□□□ 0.61
LIMS4-203ENST00000632758 SF3B2Q13435 895 aaKnown RBP18.84■□□□□ 0.61
LIMS4-203ENST00000632758 TTLL7Q6ZT98 887 aa18.84■□□□□ 0.61
LIMS4-203ENST00000632758 CAMKK2Q96RR4 588 aa18.84■□□□□ 0.61
LIMS4-203ENST00000632758 TNS1Q9HBL0 1735 aaKnown RBP18.83■□□□□ 0.6
LIMS4-203ENST00000632758 PANK1Q8TE04 598 aa18.83■□□□□ 0.6
LIMS4-203ENST00000632758 PTPRCP08575 1304 aa18.83■□□□□ 0.6
LIMS4-203ENST00000632758 IL6STP40189 918 aaPredicted RBP18.82■□□□□ 0.6
LIMS4-203ENST00000632758 EIF5P55010 431 aaKnown RBP18.82■□□□□ 0.6
LIMS4-203ENST00000632758 RC3H1Q5TC82 1133 aaKnown RBP18.82■□□□□ 0.6
LIMS4-203ENST00000632758 ILDR2Q71H61 639 aa18.82■□□□□ 0.6
LIMS4-203ENST00000632758 CNTNAP4Q9C0A0 1308 aa18.82■□□□□ 0.6
LIMS4-203ENST00000632758 ZNF831Q5JPB2 1677 aa18.82■□□□□ 0.6
LIMS4-203ENST00000632758 AMIGO3Q86WK7 504 aa18.81■□□□□ 0.6
LIMS4-203ENST00000632758 DZIP1LQ8IYY4 767 aaKnown RBP18.81■□□□□ 0.6
LIMS4-203ENST00000632758 API5Q9BZZ5 524 aaKnown RBP18.81■□□□□ 0.6
LIMS4-203ENST00000632758 CICQ96RK0 1608 aaPredicted RBP18.81■□□□□ 0.6
LIMS4-203ENST00000632758 PI4KAP2A4QPH2 592 aa18.81■□□□□ 0.6
LIMS4-203ENST00000632758 BAG6P46379 1132 aa18.81■□□□□ 0.6
LIMS4-203ENST00000632758 PI4KAP1Q8N8J0 262 aa18.81■□□□□ 0.6
LIMS4-203ENST00000632758 RPS6KA4O75676 772 aa18.8■□□□□ 0.6
LIMS4-203ENST00000632758 PDE3AQ14432 1141 aa18.8■□□□□ 0.6
LIMS4-203ENST00000632758 ANKRD13DQ6ZTN6 518 aa18.8■□□□□ 0.6
LIMS4-203ENST00000632758 CCDC125Q86Z20 511 aa18.8■□□□□ 0.6
LIMS4-203ENST00000632758 ARXQ96QS3 562 aa18.8■□□□□ 0.6
LIMS4-203ENST00000632758 GNPATO15228 680 aa18.79■□□□□ 0.6
LIMS4-203ENST00000632758 KSR2Q6VAB6 950 aa18.79■□□□□ 0.6
LIMS4-203ENST00000632758 UPF1Q92900 1129 aaKnown RBP eCLIP18.79■□□□□ 0.6
LIMS4-203ENST00000632758 TBC1D2BQ9UPU7 963 aa18.79■□□□□ 0.6
LIMS4-203ENST00000632758 MAP3K2Q9Y2U5 619 aa18.79■□□□□ 0.6
LIMS4-203ENST00000632758 ADCY9O60503 1353 aa18.79■□□□□ 0.6
LIMS4-203ENST00000632758 MYH14Q7Z406 1995 aaKnown RBP18.79■□□□□ 0.6
LIMS4-203ENST00000632758 COL5A3P25940 1745 aaPredicted RBP18.78■□□□□ 0.6
LIMS4-203ENST00000632758 SLC4A10Q6U841 1118 aa18.78■□□□□ 0.6
LIMS4-203ENST00000632758 RIC3Q7Z5B4 369 aa18.78■□□□□ 0.6
LIMS4-203ENST00000632758 FTSJ3Q8IY81 847 aaKnown RBP18.78■□□□□ 0.6
LIMS4-203ENST00000632758 TMEM57Q8N5G2 664 aa18.78■□□□□ 0.6
LIMS4-203ENST00000632758 AK7Q96M32 723 aa18.78■□□□□ 0.6
LIMS4-203ENST00000632758 COG6Q9Y2V7 657 aa18.78■□□□□ 0.6
LIMS4-203ENST00000632758 ABCC4O15439 1325 aa18.77■□□□□ 0.6
LIMS4-203ENST00000632758 DDX58O95786 925 aaKnown RBP18.77■□□□□ 0.6
LIMS4-203ENST00000632758 DNAAF4Q8WXU2 420 aa18.77■□□□□ 0.6
LIMS4-203ENST00000632758 CRBNQ96SW2 442 aa18.77■□□□□ 0.6
LIMS4-203ENST00000632758 ZBTB3Q9H5J0 574 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms