RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	ATP10D	Q9P241	1426 aa		14.02	□□□□□ -0.16
UBE3A-223	ENST00000631247	CNGB1	Q14028	1251 aa	Predicted RBP	14.02	□□□□□ -0.17
UBE3A-223	ENST00000631247	AKAP4	Q5JQC9	854 aa		14.02	□□□□□ -0.17
UBE3A-223	ENST00000631247	RPS6KA4	O75676	772 aa		14.01	□□□□□ -0.17
UBE3A-223	ENST00000631247	HMOX1	P09601	288 aa		14.01	□□□□□ -0.17
UBE3A-223	ENST00000631247	ARHGEF1	Q92888	912 aa	Known RBP	14.01	□□□□□ -0.17
UBE3A-223	ENST00000631247	CCDC87	Q9NVE4	849 aa		14.01	□□□□□ -0.17
UBE3A-223	ENST00000631247	DIAPH1	O60610	1272 aa	Known RBP	14	□□□□□ -0.17
UBE3A-223	ENST00000631247	ZNF579	Q8NAF0	562 aa	Known RBP	14	□□□□□ -0.17
UBE3A-223	ENST00000631247	PARP3	Q9Y6F1	533 aa		14	□□□□□ -0.17
UBE3A-223	ENST00000631247	N4BP2	Q86UW6	1770 aa	Predicted RBP	14	□□□□□ -0.17
UBE3A-223	ENST00000631247	MYH14	Q7Z406	1995 aa	Known RBP	14	□□□□□ -0.17
UBE3A-223	ENST00000631247	PXDNL	A1KZ92	1463 aa		13.99	□□□□□ -0.17
UBE3A-223	ENST00000631247	C10orf71	Q711Q0	1435 aa		13.99	□□□□□ -0.17
UBE3A-223	ENST00000631247	GYS1	P13807	737 aa		13.99	□□□□□ -0.17
UBE3A-223	ENST00000631247	CRKL	P46109	303 aa	Known RBP	13.99	□□□□□ -0.17
UBE3A-223	ENST00000631247	ZNF526	Q8TF50	670 aa	Predicted RBP	13.99	□□□□□ -0.17
UBE3A-223	ENST00000631247	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.99	□□□□□ -0.17
UBE3A-223	ENST00000631247	MRC1	P22897	1456 aa		13.99	□□□□□ -0.17
UBE3A-223	ENST00000631247	MNX1	P50219	401 aa	Predicted RBP	13.98	□□□□□ -0.17
UBE3A-223	ENST00000631247	SLC52A2	Q9HAB3	445 aa		13.98	□□□□□ -0.17
UBE3A-223	ENST00000631247	KIAA1551	Q9HCM1	1747 aa		13.98	□□□□□ -0.17
UBE3A-223	ENST00000631247	U2SURP	O15042	1029 aa	Known RBP	13.97	□□□□□ -0.17
UBE3A-223	ENST00000631247	TGFB2	P61812	414 aa		13.97	□□□□□ -0.17
UBE3A-223	ENST00000631247	ADCY9	O60503	1353 aa		13.96	□□□□□ -0.17
UBE3A-223	ENST00000631247	USP42	Q9H9J4	1324 aa	Known RBP	13.96	□□□□□ -0.17
UBE3A-223	ENST00000631247	BCS1L	Q9Y276	419 aa		13.96	□□□□□ -0.17
UBE3A-223	ENST00000631247	ADAMTS7	Q9UKP4	1686 aa		13.95	□□□□□ -0.18
UBE3A-223	ENST00000631247		A0A0G2JLW4	131 aa		13.95	□□□□□ -0.18
UBE3A-223	ENST00000631247	PER1	O15534	1290 aa	Predicted RBP	13.95	□□□□□ -0.18
UBE3A-223	ENST00000631247	RNMT	O43148	476 aa	Known RBP	13.95	□□□□□ -0.18
UBE3A-223	ENST00000631247	MTHFSD	Q2M296	383 aa	Known RBP	13.95	□□□□□ -0.18
UBE3A-223	ENST00000631247	LGR6	Q9HBX8	967 aa		13.95	□□□□□ -0.18
UBE3A-223	ENST00000631247	SRP68	Q9UHB9	627 aa	Known RBP	13.95	□□□□□ -0.18
UBE3A-223	ENST00000631247	NPC1L1	Q9UHC9	1359 aa		13.95	□□□□□ -0.18
UBE3A-223	ENST00000631247	KCP	Q6ZWJ8	1503 aa		13.95	□□□□□ -0.18
UBE3A-223	ENST00000631247	ZPR1	O75312	459 aa		13.94	□□□□□ -0.18
UBE3A-223	ENST00000631247	BRCA1	P38398	1863 aa	Known RBP	13.94	□□□□□ -0.18
UBE3A-223	ENST00000631247	DNAJC10	Q8IXB1	793 aa		13.94	□□□□□ -0.18
UBE3A-223	ENST00000631247	TTC5	Q8N0Z6	440 aa		13.94	□□□□□ -0.18
UBE3A-223	ENST00000631247	UBR2	Q8IWV8	1755 aa		13.94	□□□□□ -0.18
UBE3A-223	ENST00000631247	COL3A1	P02461	1466 aa	Predicted RBP	13.93	□□□□□ -0.18
UBE3A-223	ENST00000631247	FCHSD2	O94868	740 aa		13.93	□□□□□ -0.18
UBE3A-223	ENST00000631247	SLC39A6	Q13433	755 aa		13.93	□□□□□ -0.18
UBE3A-223	ENST00000631247	INTS5	Q6P9B9	1019 aa	Known RBP	13.93	□□□□□ -0.18
UBE3A-223	ENST00000631247	CFAP53	Q96M91	514 aa		13.93	□□□□□ -0.18
UBE3A-223	ENST00000631247	DPEP1	P16444	411 aa		13.92	□□□□□ -0.18
UBE3A-223	ENST00000631247	TEF	Q10587	303 aa		13.92	□□□□□ -0.18
UBE3A-223	ENST00000631247	ARHGAP27	Q6ZUM4	889 aa		13.92	□□□□□ -0.18
UBE3A-223	ENST00000631247	GAS2L2	Q8NHY3	880 aa		13.92	□□□□□ -0.18
UBE3A-223	ENST00000631247	COL15A1	P39059	1388 aa		13.92	□□□□□ -0.18
UBE3A-223	ENST00000631247	ARFGEF1	Q9Y6D6	1849 aa		13.92	□□□□□ -0.18
UBE3A-223	ENST00000631247	SOS1	Q07889	1333 aa	Predicted RBP	13.91	□□□□□ -0.18
UBE3A-223	ENST00000631247	CYP19A1	P11511	503 aa	Predicted RBP	13.91	□□□□□ -0.18
UBE3A-223	ENST00000631247	USPL1	Q5W0Q7	1092 aa		13.91	□□□□□ -0.18
UBE3A-223	ENST00000631247	GNAT3	A8MTJ3	354 aa		13.9	□□□□□ -0.18
UBE3A-223	ENST00000631247	STARD3NL	O95772	234 aa		13.9	□□□□□ -0.18
UBE3A-223	ENST00000631247	DDR1	Q08345	913 aa		13.9	□□□□□ -0.18
UBE3A-223	ENST00000631247	VSIG10	Q8N0Z9	540 aa		13.9	□□□□□ -0.18
UBE3A-223	ENST00000631247	PIM2	Q9P1W9	311 aa		13.9	□□□□□ -0.18
UBE3A-223	ENST00000631247	SIPA1L3	O60292	1781 aa	Predicted RBP	13.89	□□□□□ -0.19
UBE3A-223	ENST00000631247	DCBLD2	Q96PD2	775 aa		13.89	□□□□□ -0.19
UBE3A-223	ENST00000631247	ZBTB1	Q9Y2K1	713 aa		13.89	□□□□□ -0.19
UBE3A-223	ENST00000631247	POLRMT	O00411	1230 aa	Known RBP	13.88	□□□□□ -0.19
UBE3A-223	ENST00000631247	POTEI	P0CG38	1075 aa		13.88	□□□□□ -0.19
UBE3A-223	ENST00000631247	CANX	P27824	592 aa	Known RBP	13.88	□□□□□ -0.19
UBE3A-223	ENST00000631247	DALRD3	Q5D0E6	543 aa	Known RBP	13.88	□□□□□ -0.19
UBE3A-223	ENST00000631247	NARF	Q9UHQ1	456 aa		13.88	□□□□□ -0.19
UBE3A-223	ENST00000631247	NUDC	Q9Y266	331 aa		13.88	□□□□□ -0.19
UBE3A-223	ENST00000631247	AFDN	P55196	1824 aa	Known RBP	13.87	□□□□□ -0.19
UBE3A-223	ENST00000631247	NPM2	Q86SE8	214 aa	Known RBP	13.87	□□□□□ -0.19
UBE3A-223	ENST00000631247	SCN7A	Q01118	1682 aa		13.86	□□□□□ -0.19
UBE3A-223	ENST00000631247	TM4SF1	P30408	202 aa		13.86	□□□□□ -0.19
UBE3A-223	ENST00000631247	CHRNA5	P30532	468 aa		13.86	□□□□□ -0.19
UBE3A-223	ENST00000631247	PRKAR2B	P31323	418 aa		13.86	□□□□□ -0.19
UBE3A-223	ENST00000631247	MIER1	Q8N108	512 aa		13.86	□□□□□ -0.19
UBE3A-223	ENST00000631247	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.86	□□□□□ -0.19
UBE3A-223	ENST00000631247	HEG1	Q9ULI3	1381 aa		13.85	□□□□□ -0.19
UBE3A-223	ENST00000631247	NRXN2	Q9P2S2	1712 aa		13.85	□□□□□ -0.19
UBE3A-223	ENST00000631247		A0A087WZG4	1122 aa		13.85	□□□□□ -0.19
UBE3A-223	ENST00000631247	KCNA3	P22001	575 aa		13.85	□□□□□ -0.19
UBE3A-223	ENST00000631247	NFIX	Q14938	502 aa		13.85	□□□□□ -0.19
UBE3A-223	ENST00000631247	ZNF790	Q6PG37	636 aa		13.85	□□□□□ -0.19
UBE3A-223	ENST00000631247	FMNL2	Q96PY5	1086 aa		13.85	□□□□□ -0.19
UBE3A-223	ENST00000631247	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.85	□□□□□ -0.19
UBE3A-223	ENST00000631247	DLEC1	Q9Y238	1755 aa		13.85	□□□□□ -0.19
UBE3A-223	ENST00000631247	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.84	□□□□□ -0.19
UBE3A-223	ENST00000631247	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
UBE3A-223	ENST00000631247	C9orf131	Q5VYM1	1079 aa		13.84	□□□□□ -0.19
UBE3A-223	ENST00000631247	IL17RE	Q8NFR9	667 aa		13.84	□□□□□ -0.19
UBE3A-223	ENST00000631247	RTF1	Q92541	710 aa	Known RBP	13.84	□□□□□ -0.19
UBE3A-223	ENST00000631247	ZNF496	Q96IT1	587 aa	Predicted RBP	13.84	□□□□□ -0.19
UBE3A-223	ENST00000631247	BTBD11	A6QL63	1104 aa		13.83	□□□□□ -0.2
UBE3A-223	ENST00000631247	KIF3C	O14782	793 aa		13.83	□□□□□ -0.2
UBE3A-223	ENST00000631247	SERPINB2	P05120	415 aa		13.83	□□□□□ -0.2
UBE3A-223	ENST00000631247	HSPA6	P17066	643 aa		13.83	□□□□□ -0.2
UBE3A-223	ENST00000631247	BICDL1	Q6ZP65	573 aa		13.83	□□□□□ -0.2
UBE3A-223	ENST00000631247	PHF12	Q96QT6	1004 aa		13.83	□□□□□ -0.2
UBE3A-223	ENST00000631247	RSPH6A	Q9H0K4	717 aa		13.83	□□□□□ -0.2
UBE3A-223	ENST00000631247	RNF181	Q9P0P0	153 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms