RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 TTC22Q5TAA0 569 aa6.9□□□□□ -1.3
NEK3-211ENST00000629912 TOM1L2Q6ZVM7 507 aa6.9□□□□□ -1.3
NEK3-211ENST00000629912 C16orf71Q8IYS4 520 aaPredicted RBP6.9□□□□□ -1.3
NEK3-211ENST00000629912 LRRFIP2Q9Y608 721 aaKnown RBP6.9□□□□□ -1.3
NEK3-211ENST00000629912 ADCY9O60503 1353 aa6.9□□□□□ -1.31
NEK3-211ENST00000629912 COL5A2P05997 1499 aaPredicted RBP6.9□□□□□ -1.31
NEK3-211ENST00000629912 ABCA3Q99758 1704 aa6.9□□□□□ -1.31
NEK3-211ENST00000629912 PARP4Q9UKK3 1724 aaKnown RBP6.9□□□□□ -1.31
NEK3-211ENST00000629912 PNMA6EA0A0J9YXQ4 647 aa6.89□□□□□ -1.31
NEK3-211ENST00000629912 CDC45O75419 566 aa6.89□□□□□ -1.31
NEK3-211ENST00000629912 CABP4P57796 275 aa6.89□□□□□ -1.31
NEK3-211ENST00000629912 EVA1CP58658 441 aa6.89□□□□□ -1.31
NEK3-211ENST00000629912 MTX1Q13505 466 aa6.89□□□□□ -1.31
NEK3-211ENST00000629912 LARP1Q6PKG0 1096 aaKnown RBP6.89□□□□□ -1.31
NEK3-211ENST00000629912 LINS1Q8NG48 757 aa6.89□□□□□ -1.31
NEK3-211ENST00000629912 FMNL2Q96PY5 1086 aa6.89□□□□□ -1.31
NEK3-211ENST00000629912 STAP2Q9UGK3 403 aa6.89□□□□□ -1.31
NEK3-211ENST00000629912 UTYO14607 1347 aa6.89□□□□□ -1.31
NEK3-211ENST00000629912 ERBB4Q15303 1308 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 SALL3Q9BXA9 1300 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 PCDH11XQ9BZA7 1347 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 PCDH11YQ9BZA8 1340 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 PRAMEF22A3QJZ6 481 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 SMARCA5O60264 1052 aaPredicted RBP6.88□□□□□ -1.31
NEK3-211ENST00000629912 ANXA1P04083 346 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 IL2RBP14784 551 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 GSPT1P15170 499 aaKnown RBP6.88□□□□□ -1.31
NEK3-211ENST00000629912 PDE1AP54750 535 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 SLC39A6Q13433 755 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 PROSER3Q2NL68 480 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 HSP90AB4PQ58FF6 505 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 TBC1D9Q6ZT07 1266 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 LRP10Q7Z4F1 713 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 PPP1R42Q7Z4L9 355 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 ZNF496Q96IT1 587 aaPredicted RBP6.88□□□□□ -1.31
NEK3-211ENST00000629912 LRRCC1Q9C099 1032 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 USP35Q9P2H5 1018 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 MAP3K2Q9Y2U5 619 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 USP16Q9Y5T5 823 aa6.88□□□□□ -1.31
NEK3-211ENST00000629912 AOX1Q06278 1338 aa6.87□□□□□ -1.31
NEK3-211ENST00000629912 NBPF7P0C2Y1 421 aaPredicted RBP6.87□□□□□ -1.31
NEK3-211ENST00000629912 SDSP20132 328 aa6.87□□□□□ -1.31
NEK3-211ENST00000629912 SLC4A3P48751 1232 aa6.87□□□□□ -1.31
NEK3-211ENST00000629912 MFAP1P55081 439 aaKnown RBP6.87□□□□□ -1.31
NEK3-211ENST00000629912 TTC5Q8N0Z6 440 aa6.87□□□□□ -1.31
NEK3-211ENST00000629912 OTUD7AQ8TE49 926 aaPredicted RBP6.87□□□□□ -1.31
NEK3-211ENST00000629912 SNX21Q969T3 373 aa6.87□□□□□ -1.31
NEK3-211ENST00000629912 C5P01031 1676 aa6.87□□□□□ -1.31
NEK3-211ENST00000629912 GRM8O00222 908 aa6.86□□□□□ -1.31
NEK3-211ENST00000629912 SURF6O75683 361 aaKnown RBP6.86□□□□□ -1.31
NEK3-211ENST00000629912 ANKRD13DQ6ZTN6 518 aa6.86□□□□□ -1.31
NEK3-211ENST00000629912 COPS6Q7L5N1 327 aa6.86□□□□□ -1.31
NEK3-211ENST00000629912 RIC3Q7Z5B4 369 aa6.86□□□□□ -1.31
NEK3-211ENST00000629912 XAGE3Q8WTP9 111 aa6.86□□□□□ -1.31
NEK3-211ENST00000629912 KIF1BPQ96EK5 621 aa6.86□□□□□ -1.31
NEK3-211ENST00000629912 METTL22Q9BUU2 404 aaPredicted RBP6.86□□□□□ -1.31
NEK3-211ENST00000629912 TBC1D2Q9BYX2 928 aa6.86□□□□□ -1.31
NEK3-211ENST00000629912 C9orf78Q9NZ63 289 aaPredicted RBP6.86□□□□□ -1.31
NEK3-211ENST00000629912 EXOC6BQ9Y2D4 811 aa6.86□□□□□ -1.31
NEK3-211ENST00000629912 AHDC1Q5TGY3 1603 aaPredicted RBP6.86□□□□□ -1.31
NEK3-211ENST00000629912 COL22A1Q8NFW1 1626 aaPredicted RBP6.86□□□□□ -1.31
NEK3-211ENST00000629912 TUBGCP6Q96RT7 1819 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 COL14A1Q05707 1796 aaKnown RBP6.85□□□□□ -1.31
NEK3-211ENST00000629912 UBR2Q8IWV8 1755 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 COL15A1P39059 1388 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 SHANK3Q9BYB0 1731 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 SRGAP3O43295 1099 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 IGKV5-2P06315 115 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 NEXNQ0ZGT2 675 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 CASC1Q6TDU7 716 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 RHPN1Q8TCX5 695 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 KIF2CQ99661 725 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 TEX13AQ9BXU3 409 aaPredicted RBP6.85□□□□□ -1.31
NEK3-211ENST00000629912 USP26Q9BXU7 913 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 LTBP4Q8N2S1 1624 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 LAMB4A4D0S4 1761 aa6.85□□□□□ -1.31
NEK3-211ENST00000629912 USP42Q9H9J4 1324 aaKnown RBP6.84□□□□□ -1.31
NEK3-211ENST00000629912 NEURL1BA8MQ27 555 aa6.84□□□□□ -1.31
NEK3-211ENST00000629912 APBB1O00213 710 aa6.84□□□□□ -1.31
NEK3-211ENST00000629912 EPB41L2O43491 1005 aaKnown RBP6.84□□□□□ -1.31
NEK3-211ENST00000629912 MX1P20591 662 aa6.84□□□□□ -1.31
NEK3-211ENST00000629912 AIMP1Q12904 312 aaKnown RBP6.84□□□□□ -1.31
NEK3-211ENST00000629912 GCKRQ14397 625 aa6.84□□□□□ -1.31
NEK3-211ENST00000629912 CWF19L2Q2TBE0 894 aaKnown RBP6.84□□□□□ -1.31
NEK3-211ENST00000629912 ERC1Q8IUD2 1116 aa6.84□□□□□ -1.31
NEK3-211ENST00000629912 VSIG10Q8N0Z9 540 aa6.84□□□□□ -1.31
NEK3-211ENST00000629912 IL27Q8NEV9 243 aa6.84□□□□□ -1.31
NEK3-211ENST00000629912 PLBD2Q8NHP8 589 aa6.84□□□□□ -1.31
NEK3-211ENST00000629912 DDX54Q8TDD1 881 aaKnown RBP6.84□□□□□ -1.31
NEK3-211ENST00000629912 KAZALD1Q96I82 304 aa6.84□□□□□ -1.31
NEK3-211ENST00000629912 CDCA7Q9BWT1 371 aaPredicted RBP6.84□□□□□ -1.31
NEK3-211ENST00000629912 ANTXR1Q9H6X2 564 aa6.84□□□□□ -1.31
NEK3-211ENST00000629912 STRN4Q9NRL3 753 aa6.84□□□□□ -1.31
NEK3-211ENST00000629912 BTG4Q9NY30 223 aa6.84□□□□□ -1.31
NEK3-211ENST00000629912 ROBO1Q9Y6N7 1651 aa6.84□□□□□ -1.32
NEK3-211ENST00000629912 PAPPAQ13219 1627 aa6.83□□□□□ -1.32
NEK3-211ENST00000629912 GLI3P10071 1580 aa6.83□□□□□ -1.32
NEK3-211ENST00000629912 NBPF26B4DH59 902 aa6.83□□□□□ -1.32
NEK3-211ENST00000629912 ERC2O15083 957 aa6.83□□□□□ -1.32
NEK3-211ENST00000629912 REC8O95072 547 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms