RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 NUDCQ9Y266 331 aa14.99□□□□□ -0.01
CCDC163-208ENST00000629670 COL15A1P39059 1388 aa14.98□□□□□ -0.01
CCDC163-208ENST00000629670 MRC1P22897 1456 aa14.98□□□□□ -0.01
CCDC163-208ENST00000629670 CANXP27824 592 aaKnown RBP14.98□□□□□ -0.01
CCDC163-208ENST00000629670 C9orf131Q5VYM1 1079 aa14.98□□□□□ -0.01
CCDC163-208ENST00000629670 ZBTB1Q9Y2K1 713 aa14.98□□□□□ -0.01
CCDC163-208ENST00000629670 N4BP2Q86UW6 1770 aaPredicted RBP14.98□□□□□ -0.01
CCDC163-208ENST00000629670 TJP1Q07157 1748 aa14.97□□□□□ -0.01
CCDC163-208ENST00000629670 KIF3CO14782 793 aa14.97□□□□□ -0.01
CCDC163-208ENST00000629670 TOMM70O94826 608 aa14.96□□□□□ -0.01
CCDC163-208ENST00000629670 CHRNA5P30532 468 aa14.96□□□□□ -0.01
CCDC163-208ENST00000629670 NFIXQ14938 502 aa14.96□□□□□ -0.01
CCDC163-208ENST00000629670 ZNF790Q6PG37 636 aa14.96□□□□□ -0.01
CCDC163-208ENST00000629670 C16orf71Q8IYS4 520 aaPredicted RBP14.96□□□□□ -0.01
CCDC163-208ENST00000629670 KDM2BQ8NHM5 1336 aa14.95□□□□□ -0.02
CCDC163-208ENST00000629670 SERPINB2P05120 415 aa14.95□□□□□ -0.02
CCDC163-208ENST00000629670 FMNL2Q96PY5 1086 aa14.95□□□□□ -0.02
CCDC163-208ENST00000629670 KIAA1551Q9HCM1 1747 aa14.95□□□□□ -0.02
CCDC163-208ENST00000629670 KCPQ6ZWJ8 1503 aa14.94□□□□□ -0.02
CCDC163-208ENST00000629670 IL17REQ8NFR9 667 aa14.94□□□□□ -0.02
CCDC163-208ENST00000629670 ZNF496Q96IT1 587 aaPredicted RBP14.94□□□□□ -0.02
CCDC163-208ENST00000629670 RNF181Q9P0P0 153 aa14.94□□□□□ -0.02
CCDC163-208ENST00000629670 H0YIN7 160 aa14.93□□□□□ -0.02
CCDC163-208ENST00000629670 APLP1P51693 650 aa14.93□□□□□ -0.02
CCDC163-208ENST00000629670 EIF5P55010 431 aaKnown RBP14.93□□□□□ -0.02
CCDC163-208ENST00000629670 BICDL1Q6ZP65 573 aa14.93□□□□□ -0.02
CCDC163-208ENST00000629670 RTF1Q92541 710 aaKnown RBP14.93□□□□□ -0.02
CCDC163-208ENST00000629670 ZNF330Q9Y3S2 320 aaPredicted RBP14.93□□□□□ -0.02
CCDC163-208ENST00000629670 HEG1Q9ULI3 1381 aa14.93□□□□□ -0.02
CCDC163-208ENST00000629670 BTBD11A6QL63 1104 aa14.92□□□□□ -0.02
CCDC163-208ENST00000629670 PRKAR2BP31323 418 aa14.92□□□□□ -0.02
CCDC163-208ENST00000629670 C2CD5Q86YS7 1000 aa14.92□□□□□ -0.02
CCDC163-208ENST00000629670 TTLL6Q8N841 843 aa14.92□□□□□ -0.02
CCDC163-208ENST00000629670 NMRK2Q9NPI5 230 aa14.92□□□□□ -0.02
CCDC163-208ENST00000629670 PDZRN3Q9UPQ7 1066 aa14.92□□□□□ -0.02
CCDC163-208ENST00000629670 COL3A1P02461 1466 aaPredicted RBP14.92□□□□□ -0.02
CCDC163-208ENST00000629670 ADAMTS7Q9UKP4 1686 aa14.91□□□□□ -0.02
CCDC163-208ENST00000629670 NPHP1O15259 732 aa14.91□□□□□ -0.02
CCDC163-208ENST00000629670 U2AF1L5P0DN76 240 aaPredicted RBP14.91□□□□□ -0.02
CCDC163-208ENST00000629670 IL6STP40189 918 aaPredicted RBP14.91□□□□□ -0.02
CCDC163-208ENST00000629670 U2AF1Q01081 240 aaKnown RBP eCLIP14.91□□□□□ -0.02
CCDC163-208ENST00000629670 BCL2L12Q9HB09 334 aa14.91□□□□□ -0.02
CCDC163-208ENST00000629670 NEFMP07197 916 aa14.9□□□□□ -0.02
CCDC163-208ENST00000629670 PDE6BP35913 854 aa14.9□□□□□ -0.02
CCDC163-208ENST00000629670 RBM46Q8TBY0 533 aaKnown RBP14.9□□□□□ -0.02
CCDC163-208ENST00000629670 RSPH6AQ9H0K4 717 aa14.9□□□□□ -0.02
CCDC163-208ENST00000629670 ARFGEF1Q9Y6D6 1849 aa14.89□□□□□ -0.03
CCDC163-208ENST00000629670 CEP350Q5VT06 3117 aa14.89□□□□□ -0.03
CCDC163-208ENST00000629670 PHACTR3Q96KR7 559 aa14.89□□□□□ -0.03
CCDC163-208ENST00000629670 SETDB2Q96T68 719 aa14.89□□□□□ -0.03
CCDC163-208ENST00000629670 TBC1D2BQ9UPU7 963 aa14.89□□□□□ -0.03
CCDC163-208ENST00000629670 ZC3H4Q9UPT8 1303 aaKnown RBP14.89□□□□□ -0.03
CCDC163-208ENST00000629670 BRCA1P38398 1863 aaKnown RBP14.89□□□□□ -0.03
CCDC163-208ENST00000629670 CEMIPQ8WUJ3 1361 aa14.88□□□□□ -0.03
CCDC163-208ENST00000629670 LMNB1P20700 586 aa14.88□□□□□ -0.03
CCDC163-208ENST00000629670 PPP2R1AP30153 589 aa14.88□□□□□ -0.03
CCDC163-208ENST00000629670 TBC1D9BQ66K14 1250 aa14.88□□□□□ -0.03
CCDC163-208ENST00000629670 ZNF622Q969S3 477 aaKnown RBP eCLIP14.88□□□□□ -0.03
CCDC163-208ENST00000629670 BRIP1Q9BX63 1249 aa14.88□□□□□ -0.03
CCDC163-208ENST00000629670 CARMIL3Q8ND23 1372 aa14.87□□□□□ -0.03
CCDC163-208ENST00000629670 A1BGP04217 495 aa14.87□□□□□ -0.03
CCDC163-208ENST00000629670 FSTL1Q12841 308 aa14.87□□□□□ -0.03
CCDC163-208ENST00000629670 RRAGCQ9HB90 399 aa14.87□□□□□ -0.03
CCDC163-208ENST00000629670 UBR2Q8IWV8 1755 aa14.86□□□□□ -0.03
CCDC163-208ENST00000629670 HTATSF1O43719 755 aaKnown RBP14.86□□□□□ -0.03
CCDC163-208ENST00000629670 SNRPA1P09661 255 aaKnown RBP14.86□□□□□ -0.03
CCDC163-208ENST00000629670 ST5P78524 1137 aa14.86□□□□□ -0.03
CCDC163-208ENST00000629670 DZIP3Q86Y13 1208 aaKnown RBP14.86□□□□□ -0.03
CCDC163-208ENST00000629670 ZNF652Q9Y2D9 606 aa14.86□□□□□ -0.03
CCDC163-208ENST00000629670 VIRMAQ69YN4 1812 aaKnown RBP14.86□□□□□ -0.03
CCDC163-208ENST00000629670 RASSF7Q02833 373 aa14.85□□□□□ -0.03
CCDC163-208ENST00000629670 CNBD1Q8NA66 436 aa14.85□□□□□ -0.03
CCDC163-208ENST00000629670 KCNQ3O43525 872 aa14.84□□□□□ -0.03
CCDC163-208ENST00000629670 PRR5LQ6MZQ0 368 aa14.84□□□□□ -0.03
CCDC163-208ENST00000629670 MCM10Q7L590 875 aa14.84□□□□□ -0.03
CCDC163-208ENST00000629670 NRXN2Q9P2S2 1712 aa14.83□□□□□ -0.03
CCDC163-208ENST00000629670 CAMTA2O94983 1202 aa14.83□□□□□ -0.04
CCDC163-208ENST00000629670 DPY19L2Q6NUT2 758 aa14.83□□□□□ -0.04
CCDC163-208ENST00000629670 CLEC4GQ6UXB4 293 aa14.83□□□□□ -0.04
CCDC163-208ENST00000629670 SMC1BQ8NDV3 1235 aa14.83□□□□□ -0.04
CCDC163-208ENST00000629670 CNKSR1Q969H4 720 aa14.83□□□□□ -0.04
CCDC163-208ENST00000629670 USP16Q9Y5T5 823 aa14.83□□□□□ -0.04
CCDC163-208ENST00000629670 AFDNP55196 1824 aaKnown RBP14.82□□□□□ -0.04
CCDC163-208ENST00000629670 GLTPD2A6NH11 291 aa14.82□□□□□ -0.04
CCDC163-208ENST00000629670 VEGFAP15692 232 aaPredicted RBP14.82□□□□□ -0.04
CCDC163-208ENST00000629670 TAF7Q15545 349 aaPredicted RBP14.82□□□□□ -0.04
CCDC163-208ENST00000629670 SOGA3Q5TF21 947 aa14.82□□□□□ -0.04
CCDC163-208ENST00000629670 IFFO2Q5TF58 517 aa14.82□□□□□ -0.04
CCDC163-208ENST00000629670 PNNQ9H307 717 aaKnown RBP14.82□□□□□ -0.04
CCDC163-208ENST00000629670 ZNF219Q9P2Y4 722 aaPredicted RBP14.82□□□□□ -0.04
CCDC163-208ENST00000629670 C21orf2O43822 256 aa14.81□□□□□ -0.04
CCDC163-208ENST00000629670 STYK1Q6J9G0 422 aa14.81□□□□□ -0.04
CCDC163-208ENST00000629670 NBPF5PQ86XG9 351 aaPredicted RBP14.81□□□□□ -0.04
CCDC163-208ENST00000629670 CCDC24Q8N4L8 307 aa14.81□□□□□ -0.04
CCDC163-208ENST00000629670 PNISRQ8TF01 805 aaKnown RBP14.81□□□□□ -0.04
CCDC163-208ENST00000629670 NFKBIEO00221 500 aa14.8□□□□□ -0.04
CCDC163-208ENST00000629670 DCTN1Q14203 1278 aa14.8□□□□□ -0.04
CCDC163-208ENST00000629670 TPTE2Q6XPS3 522 aa14.8□□□□□ -0.04
CCDC163-208ENST00000629670 MASTLQ96GX5 879 aa14.8□□□□□ -0.04
CCDC163-208ENST00000629670 SIPA1L3O60292 1781 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms