RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 ZNF496Q96IT1 587 aaPredicted RBP14.37□□□□□ -0.11
CHD2-217ENST00000629136 SRP68Q9UHB9 627 aaKnown RBP14.37□□□□□ -0.11
CHD2-217ENST00000629136 ZBTB1Q9Y2K1 713 aa14.37□□□□□ -0.11
CHD2-217ENST00000629136 MCM10Q7L590 875 aa14.36□□□□□ -0.11
CHD2-217ENST00000629136 PELP1Q8IZL8 1130 aaKnown RBP14.36□□□□□ -0.11
CHD2-217ENST00000629136 NLGN1Q8N2Q7 840 aa14.36□□□□□ -0.11
CHD2-217ENST00000629136 PLEKHF1Q96S99 279 aa14.36□□□□□ -0.11
CHD2-217ENST00000629136 DCTN1Q14203 1278 aa14.35□□□□□ -0.11
CHD2-217ENST00000629136 ANKRD31Q8N7Z5 1873 aa14.35□□□□□ -0.11
CHD2-217ENST00000629136 BTBD11A6QL63 1104 aa14.34□□□□□ -0.11
CHD2-217ENST00000629136 KCNQ3O43525 872 aa14.34□□□□□ -0.11
CHD2-217ENST00000629136 FKBP8Q14318 412 aa14.34□□□□□ -0.11
CHD2-217ENST00000629136 MYBBP1AQ9BQG0 1328 aaKnown RBP14.34□□□□□ -0.11
CHD2-217ENST00000629136 HTATSF1O43719 755 aaKnown RBP14.33□□□□□ -0.12
CHD2-217ENST00000629136 RTF1Q92541 710 aaKnown RBP14.33□□□□□ -0.12
CHD2-217ENST00000629136 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.12
CHD2-217ENST00000629136 DDR1Q08345 913 aa14.32□□□□□ -0.12
CHD2-217ENST00000629136 USPL1Q5W0Q7 1092 aa14.32□□□□□ -0.12
CHD2-217ENST00000629136 COL11A2P13942 1736 aaPredicted RBP14.32□□□□□ -0.12
CHD2-217ENST00000629136 CACNA1SQ13698 1873 aa14.31□□□□□ -0.12
CHD2-217ENST00000629136 CANXP27824 592 aaKnown RBP14.31□□□□□ -0.12
CHD2-217ENST00000629136 BCL2L12Q9HB09 334 aa14.31□□□□□ -0.12
CHD2-217ENST00000629136 NARFQ9UHQ1 456 aa14.31□□□□□ -0.12
CHD2-217ENST00000629136 PARP3Q9Y6F1 533 aa14.31□□□□□ -0.12
CHD2-217ENST00000629136 PRAMEF22A3QJZ6 481 aa14.3□□□□□ -0.12
CHD2-217ENST00000629136 ZPR1O75312 459 aa14.3□□□□□ -0.12
CHD2-217ENST00000629136 STARD3NLO95772 234 aa14.3□□□□□ -0.12
CHD2-217ENST00000629136 EIF5P55010 431 aaKnown RBP14.3□□□□□ -0.12
CHD2-217ENST00000629136 NFE2L2Q16236 605 aa14.3□□□□□ -0.12
CHD2-217ENST00000629136 TEX13AQ9BXU3 409 aaPredicted RBP14.3□□□□□ -0.12
CHD2-217ENST00000629136 WWC3Q9ULE0 1092 aa14.3□□□□□ -0.12
CHD2-217ENST00000629136 POLRMTO00411 1230 aaKnown RBP14.29□□□□□ -0.12
CHD2-217ENST00000629136 GRIN3BO60391 1043 aa14.29□□□□□ -0.12
CHD2-217ENST00000629136 NEFMP07197 916 aa14.29□□□□□ -0.12
CHD2-217ENST00000629136 TM4SF1P30408 202 aa14.29□□□□□ -0.12
CHD2-217ENST00000629136 ZNF784Q8NCA9 323 aaPredicted RBP14.29□□□□□ -0.12
CHD2-217ENST00000629136 MAPK8IP3Q9UPT6 1336 aa14.29□□□□□ -0.12
CHD2-217ENST00000629136 NUP98P52948 1817 aa14.29□□□□□ -0.12
CHD2-217ENST00000629136 TGFB2P61812 414 aa14.28□□□□□ -0.12
CHD2-217ENST00000629136 PRKRIP1Q9H875 184 aaPredicted RBP14.28□□□□□ -0.12
CHD2-217ENST00000629136 USP16Q9Y5T5 823 aa14.28□□□□□ -0.12
CHD2-217ENST00000629136 ARFGEF2Q9Y6D5 1785 aa14.28□□□□□ -0.12
CHD2-217ENST00000629136 A1BGP04217 495 aa14.27□□□□□ -0.13
CHD2-217ENST00000629136 IL6STP40189 918 aaPredicted RBP14.27□□□□□ -0.13
CHD2-217ENST00000629136 TAF7Q15545 349 aaPredicted RBP14.27□□□□□ -0.13
CHD2-217ENST00000629136 THUMPD2Q9BTF0 503 aaKnown RBP14.27□□□□□ -0.13
CHD2-217ENST00000629136 PNNQ9H307 717 aaKnown RBP14.27□□□□□ -0.13
CHD2-217ENST00000629136 SBF1O95248 1867 aa14.27□□□□□ -0.13
CHD2-217ENST00000629136 ADCY9O60503 1353 aa14.26□□□□□ -0.13
CHD2-217ENST00000629136 CARMIL3Q8ND23 1372 aa14.26□□□□□ -0.13
CHD2-217ENST00000629136 A0A0G2JLW4 131 aa14.26□□□□□ -0.13
CHD2-217ENST00000629136 ZEB1P37275 1124 aaPredicted RBP14.26□□□□□ -0.13
CHD2-217ENST00000629136 PIP4K2AP48426 406 aaPredicted RBP14.26□□□□□ -0.13
CHD2-217ENST00000629136 NFIXQ14938 502 aa14.26□□□□□ -0.13
CHD2-217ENST00000629136 MIS18AQ9NYP9 233 aa14.26□□□□□ -0.13
CHD2-217ENST00000629136 A0A087WZG4 1122 aa14.25□□□□□ -0.13
CHD2-217ENST00000629136 SNRPA1P09661 255 aaKnown RBP14.25□□□□□ -0.13
CHD2-217ENST00000629136 DPEP1P16444 411 aa14.25□□□□□ -0.13
CHD2-217ENST00000629136 KCNA3P22001 575 aa14.25□□□□□ -0.13
CHD2-217ENST00000629136 ZNF330Q9Y3S2 320 aaPredicted RBP14.25□□□□□ -0.13
CHD2-217ENST00000629136 ANKRD36CQ5JPF3 1778 aa14.24□□□□□ -0.13
CHD2-217ENST00000629136 TBC1D2BQ9UPU7 963 aa14.24□□□□□ -0.13
CHD2-217ENST00000629136 CCDC88AQ3V6T2 1871 aa14.24□□□□□ -0.13
CHD2-217ENST00000629136 CAMTA2O94983 1202 aa14.23□□□□□ -0.13
CHD2-217ENST00000629136 TBC1D9BQ66K14 1250 aa14.23□□□□□ -0.13
CHD2-217ENST00000629136 CCDC146Q8IYE0 955 aa14.23□□□□□ -0.13
CHD2-217ENST00000629136 TIAM2Q8IVF5 1701 aa14.22□□□□□ -0.13
CHD2-217ENST00000629136 NBPF26B4DH59 902 aa14.22□□□□□ -0.13
CHD2-217ENST00000629136 SERPINB2P05120 415 aa14.22□□□□□ -0.13
CHD2-217ENST00000629136 TMPOP42166 694 aaKnown RBP14.22□□□□□ -0.13
CHD2-217ENST00000629136 RIPK4P57078 832 aa14.22□□□□□ -0.13
CHD2-217ENST00000629136 EIF4A1P60842 406 aaKnown RBP14.22□□□□□ -0.13
CHD2-217ENST00000629136 NBPF10Q6P3W6 841 aaKnown RBP14.22□□□□□ -0.13
CHD2-217ENST00000629136 NBPF15Q8N660 670 aa14.22□□□□□ -0.13
CHD2-217ENST00000629136 PNISRQ8TF01 805 aaKnown RBP14.22□□□□□ -0.13
CHD2-217ENST00000629136 BCS1LQ9Y276 419 aa14.22□□□□□ -0.13
CHD2-217ENST00000629136 TNRC6CQ9HCJ0 1690 aaKnown RBP14.22□□□□□ -0.13
CHD2-217ENST00000629136 ATP10DQ9P241 1426 aa14.22□□□□□ -0.13
CHD2-217ENST00000629136 CHRNA5P30532 468 aa14.21□□□□□ -0.13
CHD2-217ENST00000629136 BICDL1Q6ZP65 573 aa14.21□□□□□ -0.13
CHD2-217ENST00000629136 DZIP3Q86Y13 1208 aaKnown RBP14.21□□□□□ -0.13
CHD2-217ENST00000629136 FER1L6Q2WGJ9 1857 aa14.21□□□□□ -0.14
CHD2-217ENST00000629136 GIGYF1O75420 1035 aaPredicted RBP14.2□□□□□ -0.14
CHD2-217ENST00000629136 WDR43Q15061 677 aaKnown RBP eCLIP14.2□□□□□ -0.14
CHD2-217ENST00000629136 ADAMTS8Q9UP79 889 aa14.2□□□□□ -0.14
CHD2-217ENST00000629136 RRP7AQ9Y3A4 280 aaKnown RBP14.2□□□□□ -0.14
CHD2-217ENST00000629136 RUNDC1Q96C34 613 aa14.19□□□□□ -0.14
CHD2-217ENST00000629136 PIM2Q9P1W9 311 aa14.19□□□□□ -0.14
CHD2-217ENST00000629136 DICER1Q9UPY3 1922 aaKnown RBP14.19□□□□□ -0.14
CHD2-217ENST00000629136 LMOD3Q0VAK6 560 aa14.18□□□□□ -0.14
CHD2-217ENST00000629136 PRR5LQ6MZQ0 368 aa14.18□□□□□ -0.14
CHD2-217ENST00000629136 NPM2Q86SE8 214 aaKnown RBP14.18□□□□□ -0.14
CHD2-217ENST00000629136 TSPYL4Q9UJ04 414 aa14.18□□□□□ -0.14
CHD2-217ENST00000629136 TRIM35Q9UPQ4 493 aa14.18□□□□□ -0.14
CHD2-217ENST00000629136 SLX4Q8IY92 1834 aa14.18□□□□□ -0.14
CHD2-217ENST00000629136 NEUROD2Q15784 382 aa14.17□□□□□ -0.14
CHD2-217ENST00000629136 DALRD3Q5D0E6 543 aaKnown RBP14.16□□□□□ -0.14
CHD2-217ENST00000629136 CLEC4GQ6UXB4 293 aa14.16□□□□□ -0.14
CHD2-217ENST00000629136 BABAM1Q9NWV8 329 aa14.16□□□□□ -0.14
CHD2-217ENST00000629136 LAMB2P55268 1798 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms