RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 ILDR2Q71H61 639 aa12.83□□□□□ -0.36
SOX2-OT-249ENST00000628810 SMARCC1Q92922 1105 aaPredicted RBP12.83□□□□□ -0.36
SOX2-OT-249ENST00000628810 MBIPQ9NS73 344 aa12.83□□□□□ -0.36
SOX2-OT-249ENST00000628810 SLFN5Q08AF3 891 aa12.82□□□□□ -0.36
SOX2-OT-249ENST00000628810 CCDC125Q86Z20 511 aa12.82□□□□□ -0.36
SOX2-OT-249ENST00000628810 TRMT2AQ8IZ69 625 aaKnown RBP12.82□□□□□ -0.36
SOX2-OT-249ENST00000628810 TSPYL4Q9UJ04 414 aa12.82□□□□□ -0.36
SOX2-OT-249ENST00000628810 ASAP1Q9ULH1 1129 aa12.82□□□□□ -0.36
SOX2-OT-249ENST00000628810 C5P01031 1676 aa12.82□□□□□ -0.36
SOX2-OT-249ENST00000628810 FANCIQ9NVI1 1328 aa12.82□□□□□ -0.36
SOX2-OT-249ENST00000628810 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
SOX2-OT-249ENST00000628810 PLSCR1O15162 318 aa12.81□□□□□ -0.36
SOX2-OT-249ENST00000628810 SLC39A6Q13433 755 aa12.81□□□□□ -0.36
SOX2-OT-249ENST00000628810 MYH16Q9H6N6 1097 aa12.81□□□□□ -0.36
SOX2-OT-249ENST00000628810 KCNQ3O43525 872 aa12.8□□□□□ -0.36
SOX2-OT-249ENST00000628810 EIF4A1P60842 406 aaKnown RBP12.8□□□□□ -0.36
SOX2-OT-249ENST00000628810 TTC5Q8N0Z6 440 aa12.8□□□□□ -0.36
SOX2-OT-249ENST00000628810 VSIG10Q8N0Z9 540 aa12.8□□□□□ -0.36
SOX2-OT-249ENST00000628810 PHF12Q96QT6 1004 aa12.8□□□□□ -0.36
SOX2-OT-249ENST00000628810 MIS18AQ9NYP9 233 aa12.8□□□□□ -0.36
SOX2-OT-249ENST00000628810 DUSP27Q5VZP5 1158 aa12.79□□□□□ -0.36
SOX2-OT-249ENST00000628810 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
SOX2-OT-249ENST00000628810 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
SOX2-OT-249ENST00000628810 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
SOX2-OT-249ENST00000628810 FMNL2Q96PY5 1086 aa12.79□□□□□ -0.36
SOX2-OT-249ENST00000628810 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
SOX2-OT-249ENST00000628810 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
SOX2-OT-249ENST00000628810 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
SOX2-OT-249ENST00000628810 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
SOX2-OT-249ENST00000628810 APBA3O96018 575 aa12.78□□□□□ -0.36
SOX2-OT-249ENST00000628810 HOXB7P09629 217 aa12.78□□□□□ -0.36
SOX2-OT-249ENST00000628810 SIK1P57059 783 aa12.78□□□□□ -0.36
SOX2-OT-249ENST00000628810 UPF1Q92900 1129 aaKnown RBP eCLIP12.78□□□□□ -0.36
SOX2-OT-249ENST00000628810 SLC4A9Q96Q91 983 aa12.78□□□□□ -0.36
SOX2-OT-249ENST00000628810 LAS1LQ9Y4W2 734 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-249ENST00000628810 NUP188Q5SRE5 1749 aa12.78□□□□□ -0.36
SOX2-OT-249ENST00000628810 GALR2O43603 387 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-249ENST00000628810 POTEIP0CG38 1075 aa12.77□□□□□ -0.37
SOX2-OT-249ENST00000628810 SLC27A3Q5K4L6 730 aa12.77□□□□□ -0.37
SOX2-OT-249ENST00000628810 YTHDC1Q96MU7 727 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-249ENST00000628810 PTCD1O75127 700 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-249ENST00000628810 GIGYF1O75420 1035 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-249ENST00000628810 BAG6P46379 1132 aa12.76□□□□□ -0.37
SOX2-OT-249ENST00000628810 SF3B2Q13435 895 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-249ENST00000628810 CAMKK2Q96RR4 588 aa12.76□□□□□ -0.37
SOX2-OT-249ENST00000628810 C4BP0C0L5 1744 aa12.76□□□□□ -0.37
SOX2-OT-249ENST00000628810 SNRPA1P09661 255 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-249ENST00000628810 KAT6BQ8WYB5 2073 aa12.75□□□□□ -0.37
SOX2-OT-249ENST00000628810 TEX13AQ9BXU3 409 aaPredicted RBP12.75□□□□□ -0.37
SOX2-OT-249ENST00000628810 CT47B1P0C2W7 299 aaPredicted RBP12.74□□□□□ -0.37
SOX2-OT-249ENST00000628810 ITPK1Q13572 414 aa12.74□□□□□ -0.37
SOX2-OT-249ENST00000628810 TXNRD1Q16881 649 aa12.74□□□□□ -0.37
SOX2-OT-249ENST00000628810 KRT24Q2M2I5 525 aa12.74□□□□□ -0.37
SOX2-OT-249ENST00000628810 C8orf58Q8NAV2 365 aa12.74□□□□□ -0.37
SOX2-OT-249ENST00000628810 LRRC4BQ9NT99 713 aa12.74□□□□□ -0.37
SOX2-OT-249ENST00000628810 CCNL1Q9UK58 526 aaPredicted RBP12.74□□□□□ -0.37
SOX2-OT-249ENST00000628810 CNTNAP4Q9C0A0 1308 aa12.73□□□□□ -0.37
SOX2-OT-249ENST00000628810 HMGB2P26583 209 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-249ENST00000628810 ATP6V1AP38606 617 aa12.73□□□□□ -0.37
SOX2-OT-249ENST00000628810 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-249ENST00000628810 ERBB4Q15303 1308 aa12.72□□□□□ -0.37
SOX2-OT-249ENST00000628810 QSER1Q2KHR3 1735 aa12.72□□□□□ -0.37
SOX2-OT-249ENST00000628810 PRAMEF22A3QJZ6 481 aa12.72□□□□□ -0.37
SOX2-OT-249ENST00000628810 CYP19A1P11511 503 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-249ENST00000628810 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-249ENST00000628810 EZH2Q15910 746 aaKnown RBP12.72□□□□□ -0.37
SOX2-OT-249ENST00000628810 TWISTNBQ3B726 338 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-249ENST00000628810 DEFB132Q7Z7B7 95 aa12.72□□□□□ -0.37
SOX2-OT-249ENST00000628810 DNAJC10Q8IXB1 793 aa12.72□□□□□ -0.37
SOX2-OT-249ENST00000628810 TSPYL6Q8N831 410 aa12.72□□□□□ -0.37
SOX2-OT-249ENST00000628810 LINC00116Q8NCU8 138 aa12.72□□□□□ -0.37
SOX2-OT-249ENST00000628810 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
SOX2-OT-249ENST00000628810 VAMP4O75379 141 aa12.71□□□□□ -0.37
SOX2-OT-249ENST00000628810 STARD3NLO95772 234 aa12.71□□□□□ -0.37
SOX2-OT-249ENST00000628810 USP16Q9Y5T5 823 aa12.71□□□□□ -0.37
SOX2-OT-249ENST00000628810 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
SOX2-OT-249ENST00000628810 RC3H1Q5TC82 1133 aaKnown RBP12.7□□□□□ -0.38
SOX2-OT-249ENST00000628810 CHMP4AQ9BY43 222 aa12.7□□□□□ -0.38
SOX2-OT-249ENST00000628810 TUBGCP6Q96RT7 1819 aa12.69□□□□□ -0.38
SOX2-OT-249ENST00000628810 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
SOX2-OT-249ENST00000628810 CRKLP46109 303 aaKnown RBP12.69□□□□□ -0.38
SOX2-OT-249ENST00000628810 KCNQ4P56696 695 aa12.69□□□□□ -0.38
SOX2-OT-249ENST00000628810 HDGFL1Q5TGJ6 251 aa12.69□□□□□ -0.38
SOX2-OT-249ENST00000628810 LHX8Q68G74 356 aa12.69□□□□□ -0.38
SOX2-OT-249ENST00000628810 RASEFQ8IZ41 740 aa12.69□□□□□ -0.38
SOX2-OT-249ENST00000628810 CCDC87Q9NVE4 849 aa12.69□□□□□ -0.38
SOX2-OT-249ENST00000628810 PDIA6Q15084 440 aa12.68□□□□□ -0.38
SOX2-OT-249ENST00000628810 INTS5Q6P9B9 1019 aaKnown RBP12.68□□□□□ -0.38
SOX2-OT-249ENST00000628810 LRP10Q7Z4F1 713 aa12.68□□□□□ -0.38
SOX2-OT-249ENST00000628810 C4AP0C0L4 1744 aa12.68□□□□□ -0.38
SOX2-OT-249ENST00000628810 ELL2O00472 640 aaPredicted RBP12.67□□□□□ -0.38
SOX2-OT-249ENST00000628810 ALDH1L2Q3SY69 923 aa12.67□□□□□ -0.38
SOX2-OT-249ENST00000628810 CCDC30Q5VVM6 783 aa12.67□□□□□ -0.38
SOX2-OT-249ENST00000628810 ZBTB1Q9Y2K1 713 aa12.67□□□□□ -0.38
SOX2-OT-249ENST00000628810 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
SOX2-OT-249ENST00000628810 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
SOX2-OT-249ENST00000628810 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
SOX2-OT-249ENST00000628810 IL6STP40189 918 aaPredicted RBP12.66□□□□□ -0.38
SOX2-OT-249ENST00000628810 BRPF1P55201 1214 aaPredicted RBP12.66□□□□□ -0.38
SOX2-OT-249ENST00000628810 ZNF827Q17R98 1081 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms