RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 TMX4Q9H1E5 349 aaPredicted RBP15.56■□□□□ 0.08
SYNGAP1-207ENST00000628646 TBC1D2BQ9UPU7 963 aa15.56■□□□□ 0.08
SYNGAP1-207ENST00000628646 AHDC1Q5TGY3 1603 aaPredicted RBP15.56■□□□□ 0.08
SYNGAP1-207ENST00000628646 DLG5Q8TDM6 1919 aa15.56■□□□□ 0.08
SYNGAP1-207ENST00000628646 OVOS2A0A0G2JMS6 1433 aa15.56■□□□□ 0.08
SYNGAP1-207ENST00000628646 A1BGP04217 495 aa15.56■□□□□ 0.08
SYNGAP1-207ENST00000628646 HYPKQ9NX55 129 aa15.56■□□□□ 0.08
SYNGAP1-207ENST00000628646 PCDHB15Q9Y5E8 787 aa15.56■□□□□ 0.08
SYNGAP1-207ENST00000628646 KDRP35968 1356 aa15.55■□□□□ 0.08
SYNGAP1-207ENST00000628646 F6X3S4 739 aa15.55■□□□□ 0.08
SYNGAP1-207ENST00000628646 GPTP24298 496 aa15.55■□□□□ 0.08
SYNGAP1-207ENST00000628646 FAM161AQ3B820 660 aa15.54■□□□□ 0.08
SYNGAP1-207ENST00000628646 ZNF652Q9Y2D9 606 aa15.54■□□□□ 0.08
SYNGAP1-207ENST00000628646 EIF4A1P60842 406 aaKnown RBP15.54■□□□□ 0.08
SYNGAP1-207ENST00000628646 COPS6Q7L5N1 327 aa15.54■□□□□ 0.08
SYNGAP1-207ENST00000628646 STK32BQ9NY57 414 aa15.54■□□□□ 0.08
SYNGAP1-207ENST00000628646 XAGE3Q8WTP9 111 aa15.54■□□□□ 0.08
SYNGAP1-207ENST00000628646 MEGF6O75095 1541 aa15.54■□□□□ 0.08
SYNGAP1-207ENST00000628646 FLIIQ13045 1269 aa15.54■□□□□ 0.08
SYNGAP1-207ENST00000628646 AAMPQ13685 434 aa15.54■□□□□ 0.08
SYNGAP1-207ENST00000628646 DDRGK1Q96HY6 314 aa15.53■□□□□ 0.08
SYNGAP1-207ENST00000628646 USP16Q9Y5T5 823 aa15.53■□□□□ 0.08
SYNGAP1-207ENST00000628646 SRCIN1Q9C0H9 1055 aa15.53■□□□□ 0.08
SYNGAP1-207ENST00000628646 BABAM1Q9NWV8 329 aa15.53■□□□□ 0.08
SYNGAP1-207ENST00000628646 MYD88Q99836 296 aa15.52■□□□□ 0.08
SYNGAP1-207ENST00000628646 SLIT3O75094 1523 aa15.52■□□□□ 0.08
SYNGAP1-207ENST00000628646 ATF7IPQ6VMQ6 1270 aa15.52■□□□□ 0.08
SYNGAP1-207ENST00000628646 PI4KAP2A4QPH2 592 aa15.51■□□□□ 0.07
SYNGAP1-207ENST00000628646 VAMP4O75379 141 aa15.51■□□□□ 0.07
SYNGAP1-207ENST00000628646 PI4KAP1Q8N8J0 262 aa15.51■□□□□ 0.07
SYNGAP1-207ENST00000628646 NFAT5O94916 1531 aa15.51■□□□□ 0.07
SYNGAP1-207ENST00000628646 ATP5J2-PTCD1G3V325 749 aa15.51■□□□□ 0.07
SYNGAP1-207ENST00000628646 UBTFL1P0CB47 393 aaPredicted RBP15.51■□□□□ 0.07
SYNGAP1-207ENST00000628646 DZIP3Q86Y13 1208 aaKnown RBP15.51■□□□□ 0.07
SYNGAP1-207ENST00000628646 DDX19BQ9UMR2 479 aa15.51■□□□□ 0.07
SYNGAP1-207ENST00000628646 PALLDQ8WX93 1383 aa15.51■□□□□ 0.07
SYNGAP1-207ENST00000628646 ALDH1L2Q3SY69 923 aa15.51■□□□□ 0.07
SYNGAP1-207ENST00000628646 ANKRD13DQ6ZTN6 518 aa15.51■□□□□ 0.07
SYNGAP1-207ENST00000628646 CCDC87Q9NVE4 849 aa15.51■□□□□ 0.07
SYNGAP1-207ENST00000628646 GIGYF1O75420 1035 aaPredicted RBP15.5■□□□□ 0.07
SYNGAP1-207ENST00000628646 TRAPPC3LQ5T215 181 aa15.5■□□□□ 0.07
SYNGAP1-207ENST00000628646 ATG3Q9NT62 314 aa15.5■□□□□ 0.07
SYNGAP1-207ENST00000628646 A0A087WZG4 1122 aa15.5■□□□□ 0.07
SYNGAP1-207ENST00000628646 EN1Q05925 392 aaPredicted RBP15.5■□□□□ 0.07
SYNGAP1-207ENST00000628646 MAP3K2Q9Y2U5 619 aa15.49■□□□□ 0.07
SYNGAP1-207ENST00000628646 PRAMEF22A3QJZ6 481 aa15.49■□□□□ 0.07
SYNGAP1-207ENST00000628646 HMMRO75330 724 aa15.49■□□□□ 0.07
SYNGAP1-207ENST00000628646 DNAAF4Q8WXU2 420 aa15.49■□□□□ 0.07
SYNGAP1-207ENST00000628646 RGPD1P0DJD0 1748 aa15.49■□□□□ 0.07
SYNGAP1-207ENST00000628646 CCDC85AQ96PX6 553 aaPredicted RBP15.48■□□□□ 0.07
SYNGAP1-207ENST00000628646 PHAXQ9H814 394 aaKnown RBP15.48■□□□□ 0.07
SYNGAP1-207ENST00000628646 DDX21Q9NR30 783 aaKnown RBP eCLIP15.48■□□□□ 0.07
SYNGAP1-207ENST00000628646 XIRP1Q702N8 1843 aaKnown RBP15.48■□□□□ 0.07
SYNGAP1-207ENST00000628646 PEAK1Q9H792 1746 aa15.48■□□□□ 0.07
SYNGAP1-207ENST00000628646 RGS3P49796 1198 aa15.48■□□□□ 0.07
SYNGAP1-207ENST00000628646 RWDD1Q9H446 243 aaPredicted RBP15.48■□□□□ 0.07
SYNGAP1-207ENST00000628646 CCT4P50991 539 aaKnown RBP15.47■□□□□ 0.07
SYNGAP1-207ENST00000628646 MVPQ14764 893 aaKnown RBP15.47■□□□□ 0.07
SYNGAP1-207ENST00000628646 TRMT112Q9UI30 125 aaKnown RBP15.47■□□□□ 0.07
SYNGAP1-207ENST00000628646 NBR1Q14596 966 aa15.47■□□□□ 0.07
SYNGAP1-207ENST00000628646 HSP90AB3PQ58FF7 597 aa15.47■□□□□ 0.07
SYNGAP1-207ENST00000628646 SEC24BO95487 1268 aa15.46■□□□□ 0.07
SYNGAP1-207ENST00000628646 TRIM27P14373 513 aa15.46■□□□□ 0.07
SYNGAP1-207ENST00000628646 NCAPD2Q15021 1401 aa15.46■□□□□ 0.07
SYNGAP1-207ENST00000628646 COL16A1Q07092 1604 aaPredicted RBP15.46■□□□□ 0.07
SYNGAP1-207ENST00000628646 GNAI3P08754 354 aa15.46■□□□□ 0.07
SYNGAP1-207ENST00000628646 CRKLP46109 303 aaKnown RBP15.46■□□□□ 0.07
SYNGAP1-207ENST00000628646 C1orf115Q9H7X2 142 aa15.46■□□□□ 0.07
SYNGAP1-207ENST00000628646 JARID2Q92833 1246 aaPredicted RBP15.46■□□□□ 0.06
SYNGAP1-207ENST00000628646 ZBTB1Q9Y2K1 713 aa15.46■□□□□ 0.06
SYNGAP1-207ENST00000628646 HOXB7P09629 217 aa15.45■□□□□ 0.06
SYNGAP1-207ENST00000628646 TXNRD1Q16881 649 aa15.45■□□□□ 0.06
SYNGAP1-207ENST00000628646 DEFB132Q7Z7B7 95 aa15.45■□□□□ 0.06
SYNGAP1-207ENST00000628646 NIP7Q9Y221 180 aaKnown RBP eCLIP15.45■□□□□ 0.06
SYNGAP1-207ENST00000628646 G2E3Q7L622 706 aa15.45■□□□□ 0.06
SYNGAP1-207ENST00000628646 HSP90B1P14625 803 aaKnown RBP15.45■□□□□ 0.06
SYNGAP1-207ENST00000628646 SETDB2Q96T68 719 aa15.45■□□□□ 0.06
SYNGAP1-207ENST00000628646 BCL9LQ86UU0 1499 aa15.45■□□□□ 0.06
SYNGAP1-207ENST00000628646 LRP6O75581 1613 aa15.44■□□□□ 0.06
SYNGAP1-207ENST00000628646 TMEM57Q8N5G2 664 aa15.44■□□□□ 0.06
SYNGAP1-207ENST00000628646 G3V3G9 751 aa15.44■□□□□ 0.06
SYNGAP1-207ENST00000628646 GORABQ5T7V8 394 aa15.44■□□□□ 0.06
SYNGAP1-207ENST00000628646 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
SYNGAP1-207ENST00000628646 NHSL1Q5SYE7 1610 aa15.44■□□□□ 0.06
SYNGAP1-207ENST00000628646 LTN1O94822 1766 aa15.44■□□□□ 0.06
SYNGAP1-207ENST00000628646 NBPF5PQ86XG9 351 aaPredicted RBP15.44■□□□□ 0.06
SYNGAP1-207ENST00000628646 EIF5BO60841 1220 aaKnown RBP15.43■□□□□ 0.06
SYNGAP1-207ENST00000628646 NKX1-1Q15270 411 aaPredicted RBP15.43■□□□□ 0.06
SYNGAP1-207ENST00000628646 SLIT2O94813 1529 aa15.43■□□□□ 0.06
SYNGAP1-207ENST00000628646 HEG1Q9ULI3 1381 aa15.43■□□□□ 0.06
SYNGAP1-207ENST00000628646 BRPF1P55201 1214 aaPredicted RBP15.43■□□□□ 0.06
SYNGAP1-207ENST00000628646 MRPL50Q8N5N7 158 aaKnown RBP15.43■□□□□ 0.06
SYNGAP1-207ENST00000628646 COL14A1Q05707 1796 aaKnown RBP15.43■□□□□ 0.06
SYNGAP1-207ENST00000628646 KSR2Q6VAB6 950 aa15.43■□□□□ 0.06
SYNGAP1-207ENST00000628646 TNS2Q63HR2 1409 aa15.42■□□□□ 0.06
SYNGAP1-207ENST00000628646 PTPRCP08575 1304 aa15.42■□□□□ 0.06
SYNGAP1-207ENST00000628646 ZNF853P0CG23 659 aa15.42■□□□□ 0.06
SYNGAP1-207ENST00000628646 MSL1Q68DK7 614 aa15.42■□□□□ 0.06
SYNGAP1-207ENST00000628646 MARF1Q9Y4F3 1742 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-207ENST00000628646 UBE3BQ7Z3V4 1068 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms