RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 EXOSC9Q06265 439 aaKnown RBP17.93■□□□□ 0.46
MECP2-217ENST00000628176 TNS1Q9HBL0 1735 aaKnown RBP17.92■□□□□ 0.46
MECP2-217ENST00000628176 APBA3O96018 575 aa17.92■□□□□ 0.46
MECP2-217ENST00000628176 TTC5Q8N0Z6 440 aa17.92■□□□□ 0.46
MECP2-217ENST00000628176 KCPQ6ZWJ8 1503 aa17.92■□□□□ 0.46
MECP2-217ENST00000628176 IGHDP01880 384 aa17.92■□□□□ 0.46
MECP2-217ENST00000628176 DAXXQ9UER7 740 aaPredicted RBP17.92■□□□□ 0.46
MECP2-217ENST00000628176 PALLDQ8WX93 1383 aa17.92■□□□□ 0.46
MECP2-217ENST00000628176 UBR2Q8IWV8 1755 aa17.91■□□□□ 0.46
MECP2-217ENST00000628176 NECTIN2Q92692 538 aa17.9■□□□□ 0.46
MECP2-217ENST00000628176 DEFB132Q7Z7B7 95 aa17.89■□□□□ 0.46
MECP2-217ENST00000628176 C5P01031 1676 aa17.89■□□□□ 0.45
MECP2-217ENST00000628176 CANXP27824 592 aaKnown RBP17.89■□□□□ 0.45
MECP2-217ENST00000628176 RGS3P49796 1198 aa17.88■□□□□ 0.45
MECP2-217ENST00000628176 EN1Q05925 392 aaPredicted RBP17.88■□□□□ 0.45
MECP2-217ENST00000628176 PROM2Q8N271 834 aa17.88■□□□□ 0.45
MECP2-217ENST00000628176 FMNL2Q96PY5 1086 aa17.88■□□□□ 0.45
MECP2-217ENST00000628176 LOC102724428A0A0B4J2F2 783 aa17.87■□□□□ 0.45
MECP2-217ENST00000628176 PIP4K2AP48426 406 aaPredicted RBP17.87■□□□□ 0.45
MECP2-217ENST00000628176 SIK1P57059 783 aa17.87■□□□□ 0.45
MECP2-217ENST00000628176 ITPK1Q13572 414 aa17.87■□□□□ 0.45
MECP2-217ENST00000628176 DNAJC10Q8IXB1 793 aa17.87■□□□□ 0.45
MECP2-217ENST00000628176 PANK1Q8TE04 598 aa17.87■□□□□ 0.45
MECP2-217ENST00000628176 COG6Q9Y2V7 657 aa17.87■□□□□ 0.45
MECP2-217ENST00000628176 USP16Q9Y5T5 823 aa17.87■□□□□ 0.45
MECP2-217ENST00000628176 GIGYF1O75420 1035 aaPredicted RBP17.86■□□□□ 0.45
MECP2-217ENST00000628176 ATP6V1AP38606 617 aa17.86■□□□□ 0.45
MECP2-217ENST00000628176 LRRC4BQ9NT99 713 aa17.86■□□□□ 0.45
MECP2-217ENST00000628176 LY75O60449 1722 aa17.86■□□□□ 0.45
MECP2-217ENST00000628176 HEG1Q9ULI3 1381 aa17.86■□□□□ 0.45
MECP2-217ENST00000628176 EIF2S2P20042 333 aaKnown RBP17.86■□□□□ 0.45
MECP2-217ENST00000628176 SMARCC1Q92922 1105 aaPredicted RBP17.86■□□□□ 0.45
MECP2-217ENST00000628176 NFKBIBQ15653 356 aa17.85■□□□□ 0.45
MECP2-217ENST00000628176 EZH2Q15910 746 aaKnown RBP17.85■□□□□ 0.45
MECP2-217ENST00000628176 UPF1Q92900 1129 aaKnown RBP eCLIP17.85■□□□□ 0.455e-7■■□□□ 11.4
MECP2-217ENST00000628176 TJP1Q07157 1748 aa17.85■□□□□ 0.45
MECP2-217ENST00000628176 TWISTNBQ3B726 338 aaPredicted RBP17.84■□□□□ 0.45
MECP2-217ENST00000628176 ZNF428Q96B54 188 aa17.84■□□□□ 0.45
MECP2-217ENST00000628176 CCNL1Q9UK58 526 aaPredicted RBP17.84■□□□□ 0.45
MECP2-217ENST00000628176 VAMP4O75379 141 aa17.84■□□□□ 0.45
MECP2-217ENST00000628176 SNRPA1P09661 255 aaKnown RBP17.84■□□□□ 0.45
MECP2-217ENST00000628176 TXNRD1Q16881 649 aa17.84■□□□□ 0.45
MECP2-217ENST00000628176 SMIM5Q71RC9 77 aa17.84■□□□□ 0.45
MECP2-217ENST00000628176 RWDD1Q9H446 243 aaPredicted RBP17.84■□□□□ 0.45
MECP2-217ENST00000628176 MYH14Q7Z406 1995 aaKnown RBP17.83■□□□□ 0.45
MECP2-217ENST00000628176 ANXA1P04083 346 aa17.83■□□□□ 0.44
MECP2-217ENST00000628176 LINC00116Q8NCU8 138 aa17.83■□□□□ 0.44
MECP2-217ENST00000628176 SOS1Q07889 1333 aaPredicted RBP17.82■□□□□ 0.44
MECP2-217ENST00000628176 A1BGP04217 495 aa17.82■□□□□ 0.44
MECP2-217ENST00000628176 SF3B2Q13435 895 aaKnown RBP17.82■□□□□ 0.44
MECP2-217ENST00000628176 BCL2L13Q9BXK5 485 aa17.82■□□□□ 0.44
MECP2-217ENST00000628176 PLSCR1O15162 318 aa17.81■□□□□ 0.44
MECP2-217ENST00000628176 MVPQ14764 893 aaKnown RBP17.81■□□□□ 0.44
MECP2-217ENST00000628176 ZKSCAN2Q63HK3 967 aa17.81■□□□□ 0.44
MECP2-217ENST00000628176 CAMKK2Q96RR4 588 aa17.81■□□□□ 0.44
MECP2-217ENST00000628176 TAF1LQ8IZX4 1826 aa17.81■□□□□ 0.44
MECP2-217ENST00000628176 CACNA1FO60840 1977 aa17.81■□□□□ 0.44
MECP2-217ENST00000628176 PROSER3Q2NL68 480 aa17.81■□□□□ 0.44
MECP2-217ENST00000628176 FRAT1Q92837 279 aaPredicted RBP17.81■□□□□ 0.44
MECP2-217ENST00000628176 PCDHB15Q9Y5E8 787 aa17.81■□□□□ 0.44
MECP2-217ENST00000628176 CYP19A1P11511 503 aaPredicted RBP17.8■□□□□ 0.44
MECP2-217ENST00000628176 RLBP1P12271 317 aa17.8■□□□□ 0.44
MECP2-217ENST00000628176 CHMP4AQ9BY43 222 aa17.8■□□□□ 0.44
MECP2-217ENST00000628176 BECN1Q14457 450 aa17.79■□□□□ 0.44
MECP2-217ENST00000628176 GSE1Q14687 1217 aa17.79■□□□□ 0.44
MECP2-217ENST00000628176 HDGFL1Q5TGJ6 251 aa17.79■□□□□ 0.44
MECP2-217ENST00000628176 VSIG10Q8N0Z9 540 aa17.79■□□□□ 0.44
MECP2-217ENST00000628176 HOXB7P09629 217 aa17.78■□□□□ 0.44
MECP2-217ENST00000628176 BAG6P46379 1132 aa17.78■□□□□ 0.44
MECP2-217ENST00000628176 AMIGO3Q86WK7 504 aa17.78■□□□□ 0.44
MECP2-217ENST00000628176 COL5A3P25940 1745 aaPredicted RBP17.78■□□□□ 0.44
MECP2-217ENST00000628176 NBPF26B4DH59 902 aa17.78■□□□□ 0.44
MECP2-217ENST00000628176 HDAC1Q13547 482 aaPredicted RBP17.78■□□□□ 0.44
MECP2-217ENST00000628176 NBPF14Q5TI25 921 aa17.78■□□□□ 0.44
MECP2-217ENST00000628176 NBPF10Q6P3W6 841 aaKnown RBP17.78■□□□□ 0.44
MECP2-217ENST00000628176 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
MECP2-217ENST00000628176 CHPF2Q9P2E5 772 aa17.78■□□□□ 0.44
MECP2-217ENST00000628176 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
MECP2-217ENST00000628176 MYL6BP14649 208 aa17.77■□□□□ 0.44
MECP2-217ENST00000628176 CRKLP46109 303 aaKnown RBP17.77■□□□□ 0.44
MECP2-217ENST00000628176 PDIA6Q15084 440 aa17.77■□□□□ 0.44
MECP2-217ENST00000628176 ALDH1L2Q3SY69 923 aa17.77■□□□□ 0.44
MECP2-217ENST00000628176 INTS5Q6P9B9 1019 aaKnown RBP17.77■□□□□ 0.44
MECP2-217ENST00000628176 DZIP1LQ8IYY4 767 aaKnown RBP17.77■□□□□ 0.44
MECP2-217ENST00000628176 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.44
MECP2-217ENST00000628176 ZBTB1Q9Y2K1 713 aa17.77■□□□□ 0.44
MECP2-217ENST00000628176 ZNF330Q9Y3S2 320 aaPredicted RBP17.76■□□□□ 0.43
MECP2-217ENST00000628176 BRPF1P55201 1214 aaPredicted RBP17.75■□□□□ 0.43
MECP2-217ENST00000628176 G2E3Q7L622 706 aa17.75■□□□□ 0.43
MECP2-217ENST00000628176 UPF2Q9HAU5 1272 aaKnown RBP17.75■□□□□ 0.43
MECP2-217ENST00000628176 PDZRN3Q9UPQ7 1066 aa17.75■□□□□ 0.43
MECP2-217ENST00000628176 STARD3NLO95772 234 aa17.75■□□□□ 0.43
MECP2-217ENST00000628176 ZNF827Q17R98 1081 aa17.75■□□□□ 0.43
MECP2-217ENST00000628176 SLC27A3Q5K4L6 730 aa17.75■□□□□ 0.43
MECP2-217ENST00000628176 CCDC125Q86Z20 511 aa17.75■□□□□ 0.43
MECP2-217ENST00000628176 DDX19BQ9UMR2 479 aa17.75■□□□□ 0.43
MECP2-217ENST00000628176 ZNF831Q5JPB2 1677 aa17.75■□□□□ 0.43
MECP2-217ENST00000628176 SLC4A3P48751 1232 aa17.74■□□□□ 0.43
MECP2-217ENST00000628176 TBC1D32Q96NH3 1257 aa17.74■□□□□ 0.43
MECP2-217ENST00000628176 PHAXQ9H814 394 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms