RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 PIGBQ92521 554 aa12.95□□□□□ -0.34
LINC01943-202ENST00000628090 SOS1Q07889 1333 aaPredicted RBP12.94□□□□□ -0.34
LINC01943-202ENST00000628090 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
LINC01943-202ENST00000628090 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
LINC01943-202ENST00000628090 LY75O60449 1722 aa12.94□□□□□ -0.34
LINC01943-202ENST00000628090 PLIN1O60240 522 aa12.94□□□□□ -0.34
LINC01943-202ENST00000628090 HSP90AB1P08238 724 aaKnown RBP12.94□□□□□ -0.34
LINC01943-202ENST00000628090 ZKSCAN2Q63HK3 967 aa12.94□□□□□ -0.34
LINC01943-202ENST00000628090 SMIM5Q71RC9 77 aa12.94□□□□□ -0.34
LINC01943-202ENST00000628090 MCM10Q7L590 875 aa12.94□□□□□ -0.34
LINC01943-202ENST00000628090 COL23A1Q86Y22 540 aaPredicted RBP12.94□□□□□ -0.34
LINC01943-202ENST00000628090 MBIPQ9NS73 344 aa12.94□□□□□ -0.34
LINC01943-202ENST00000628090 TSPYL4Q9UJ04 414 aa12.94□□□□□ -0.34
LINC01943-202ENST00000628090 TUBGCP6Q96RT7 1819 aa12.94□□□□□ -0.34
LINC01943-202ENST00000628090 CHL1O00533 1208 aa12.93□□□□□ -0.34
LINC01943-202ENST00000628090 BCAR3O75815 825 aa12.93□□□□□ -0.34
LINC01943-202ENST00000628090 TEFQ10587 303 aa12.93□□□□□ -0.34
LINC01943-202ENST00000628090 DCTN1Q14203 1278 aa12.93□□□□□ -0.34
LINC01943-202ENST00000628090 TWISTNBQ3B726 338 aaPredicted RBP12.93□□□□□ -0.34
LINC01943-202ENST00000628090 THUMPD2Q9BTF0 503 aaKnown RBP12.93□□□□□ -0.34
LINC01943-202ENST00000628090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC01943-202ENST00000628090 NKX1-1Q15270 411 aaPredicted RBP12.92□□□□□ -0.34
LINC01943-202ENST00000628090 TAF7Q15545 349 aaPredicted RBP12.92□□□□□ -0.34
LINC01943-202ENST00000628090 AMIGO3Q86WK7 504 aa12.92□□□□□ -0.34
LINC01943-202ENST00000628090 SLC16A10Q8TF71 515 aa12.92□□□□□ -0.34
LINC01943-202ENST00000628090 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
LINC01943-202ENST00000628090 ABCB7O75027 752 aa12.91□□□□□ -0.34
LINC01943-202ENST00000628090 POLA2Q14181 598 aa12.91□□□□□ -0.34
LINC01943-202ENST00000628090 MSL1Q68DK7 614 aa12.91□□□□□ -0.34
LINC01943-202ENST00000628090 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
LINC01943-202ENST00000628090 EXOC6Q8TAG9 804 aa12.91□□□□□ -0.34
LINC01943-202ENST00000628090 CRBNQ96SW2 442 aa12.91□□□□□ -0.34
LINC01943-202ENST00000628090 PALLDQ8WX93 1383 aa12.91□□□□□ -0.34
LINC01943-202ENST00000628090 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
LINC01943-202ENST00000628090 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
LINC01943-202ENST00000628090 DZIP1LQ8IYY4 767 aaKnown RBP12.9□□□□□ -0.34
LINC01943-202ENST00000628090 NLGN2Q8NFZ4 835 aa12.9□□□□□ -0.34
LINC01943-202ENST00000628090 ASAP1Q9ULH1 1129 aa12.9□□□□□ -0.34
LINC01943-202ENST00000628090 ITGB4P16144 1822 aa12.9□□□□□ -0.34
LINC01943-202ENST00000628090 QSER1Q2KHR3 1735 aa12.89□□□□□ -0.35
LINC01943-202ENST00000628090 PKD1L3Q7Z443 1732 aa12.89□□□□□ -0.35
LINC01943-202ENST00000628090 VAMP4O75379 141 aa12.89□□□□□ -0.35
LINC01943-202ENST00000628090 PHKG2P15735 406 aa12.89□□□□□ -0.35
LINC01943-202ENST00000628090 POLD1P28340 1107 aa12.89□□□□□ -0.35
LINC01943-202ENST00000628090 IFNL2Q8IZJ0 200 aa12.89□□□□□ -0.35
LINC01943-202ENST00000628090 ARHGAP45Q92619 1136 aa12.89□□□□□ -0.35
LINC01943-202ENST00000628090 STK31Q9BXU1 1019 aa12.89□□□□□ -0.35
LINC01943-202ENST00000628090 CACNA1FO60840 1977 aa12.89□□□□□ -0.35
LINC01943-202ENST00000628090 B4GALNT3Q6L9W6 998 aa12.88□□□□□ -0.35
LINC01943-202ENST00000628090 ATF7IPQ6VMQ6 1270 aa12.88□□□□□ -0.35
LINC01943-202ENST00000628090 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
LINC01943-202ENST00000628090 API5Q9BZZ5 524 aaKnown RBP12.88□□□□□ -0.35
LINC01943-202ENST00000628090 RNMTO43148 476 aaKnown RBP12.87□□□□□ -0.35
LINC01943-202ENST00000628090 SMARCC1Q92922 1105 aaPredicted RBP12.87□□□□□ -0.35
LINC01943-202ENST00000628090 BCL2L13Q9BXK5 485 aa12.87□□□□□ -0.35
LINC01943-202ENST00000628090 DDX19BQ9UMR2 479 aa12.87□□□□□ -0.35
LINC01943-202ENST00000628090 COL24A1Q17RW2 1714 aa12.87□□□□□ -0.35
LINC01943-202ENST00000628090 CEMIPQ8WUJ3 1361 aa12.86□□□□□ -0.35
LINC01943-202ENST00000628090 LOC102724428A0A0B4J2F2 783 aa12.86□□□□□ -0.35
LINC01943-202ENST00000628090 BTBD11A6QL63 1104 aa12.86□□□□□ -0.35
LINC01943-202ENST00000628090 ELL2O00472 640 aaPredicted RBP12.86□□□□□ -0.35
LINC01943-202ENST00000628090 SIK1P57059 783 aa12.86□□□□□ -0.35
LINC01943-202ENST00000628090 ITPK1Q13572 414 aa12.86□□□□□ -0.35
LINC01943-202ENST00000628090 GPR162Q16538 588 aa12.86□□□□□ -0.35
LINC01943-202ENST00000628090 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
LINC01943-202ENST00000628090 LINC00116Q8NCU8 138 aa12.86□□□□□ -0.35
LINC01943-202ENST00000628090 IL17REQ8NFR9 667 aa12.86□□□□□ -0.35
LINC01943-202ENST00000628090 ATG3Q9NT62 314 aa12.86□□□□□ -0.35
LINC01943-202ENST00000628090 TMOD3Q9NYL9 352 aa12.86□□□□□ -0.35
LINC01943-202ENST00000628090 NOB1Q9ULX3 412 aaKnown RBP12.86□□□□□ -0.35
LINC01943-202ENST00000628090 C5P01031 1676 aa12.86□□□□□ -0.35
LINC01943-202ENST00000628090 TAF1LQ8IZX4 1826 aa12.85□□□□□ -0.35
LINC01943-202ENST00000628090 SCN11AQ9UI33 1791 aa12.85□□□□□ -0.35
LINC01943-202ENST00000628090 PHF14O94880 888 aa12.85□□□□□ -0.35
LINC01943-202ENST00000628090 HOXB7P09629 217 aa12.85□□□□□ -0.35
LINC01943-202ENST00000628090 C8orf58Q8NAV2 365 aa12.85□□□□□ -0.35
LINC01943-202ENST00000628090 ZNF784Q8NCA9 323 aaPredicted RBP12.85□□□□□ -0.35
LINC01943-202ENST00000628090 DCAF5Q96JK2 942 aa12.85□□□□□ -0.35
LINC01943-202ENST00000628090 SLC4A9Q96Q91 983 aa12.85□□□□□ -0.35
LINC01943-202ENST00000628090 PTPRCP08575 1304 aa12.85□□□□□ -0.35
LINC01943-202ENST00000628090 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.84□□□□□ -0.35
LINC01943-202ENST00000628090 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
LINC01943-202ENST00000628090 AK7Q96M32 723 aa12.84□□□□□ -0.35
LINC01943-202ENST00000628090 YBX3P16989 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC01943-202ENST00000628090 ATP6V1AP38606 617 aa12.83□□□□□ -0.36
LINC01943-202ENST00000628090 MVPQ14764 893 aaKnown RBP12.83□□□□□ -0.36
LINC01943-202ENST00000628090 ITPRIPQ8IWB1 547 aa12.83□□□□□ -0.36
LINC01943-202ENST00000628090 MRPL50Q8N5N7 158 aaKnown RBP12.83□□□□□ -0.36
LINC01943-202ENST00000628090 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
LINC01943-202ENST00000628090 FLAD1Q8NFF5 587 aa12.83□□□□□ -0.36
LINC01943-202ENST00000628090 PANK1Q8TE04 598 aa12.83□□□□□ -0.36
LINC01943-202ENST00000628090 COG6Q9Y2V7 657 aa12.83□□□□□ -0.36
LINC01943-202ENST00000628090 KDM3BQ7LBC6 1761 aa12.83□□□□□ -0.36
LINC01943-202ENST00000628090 C4BP0C0L5 1744 aa12.82□□□□□ -0.36
LINC01943-202ENST00000628090 CABP4P57796 275 aa12.82□□□□□ -0.36
LINC01943-202ENST00000628090 CENPQQ7L2Z9 268 aaPredicted RBP12.82□□□□□ -0.36
LINC01943-202ENST00000628090 TTC5Q8N0Z6 440 aa12.82□□□□□ -0.36
LINC01943-202ENST00000628090 CLUAP1Q96AJ1 413 aa12.82□□□□□ -0.36
LINC01943-202ENST00000628090 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
LINC01943-202ENST00000628090 ERVV-2B6SEH9 535 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms