RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 TM4SF1P30408 202 aa16.16■□□□□ 0.18
UBR1-212ENST00000627960 DDR1Q08345 913 aa16.16■□□□□ 0.18
UBR1-212ENST00000627960 TEX13AQ9BXU3 409 aaPredicted RBP16.16■□□□□ 0.18
UBR1-212ENST00000627960 NARFQ9UHQ1 456 aa16.16■□□□□ 0.18
UBR1-212ENST00000627960 COL15A1P39059 1388 aa16.15■□□□□ 0.18
UBR1-212ENST00000627960 HEG1Q9ULI3 1381 aa16.15■□□□□ 0.18
UBR1-212ENST00000627960 A0A0G2JLW4 131 aa16.15■□□□□ 0.18
UBR1-212ENST00000627960 BRCA1P38398 1863 aaKnown RBP16.15■□□□□ 0.18
UBR1-212ENST00000627960 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
UBR1-212ENST00000627960 DPEP1P16444 411 aa16.14■□□□□ 0.17
UBR1-212ENST00000627960 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
UBR1-212ENST00000627960 FMNL2Q96PY5 1086 aa16.14■□□□□ 0.17
UBR1-212ENST00000627960 AFDNP55196 1824 aaKnown RBP16.13■□□□□ 0.17
UBR1-212ENST00000627960 POLRMTO00411 1230 aaKnown RBP16.13■□□□□ 0.17
UBR1-212ENST00000627960 KCNQ3O43525 872 aa16.13■□□□□ 0.17
UBR1-212ENST00000627960 HTATSF1O43719 755 aaKnown RBP16.13■□□□□ 0.17
UBR1-212ENST00000627960 EIF5P55010 431 aaKnown RBP16.13■□□□□ 0.17
UBR1-212ENST00000627960 RTF1Q92541 710 aaKnown RBP16.13■□□□□ 0.17
UBR1-212ENST00000627960 DLG5Q8TDM6 1919 aa16.13■□□□□ 0.17
UBR1-212ENST00000627960 A0A087WZG4 1122 aa16.12■□□□□ 0.17
UBR1-212ENST00000627960 KCNA3P22001 575 aa16.12■□□□□ 0.17
UBR1-212ENST00000627960 MCM10Q7L590 875 aa16.12■□□□□ 0.17
UBR1-212ENST00000627960 NFIXQ14938 502 aa16.11■□□□□ 0.17
UBR1-212ENST00000627960 BCL2L12Q9HB09 334 aa16.11■□□□□ 0.17
UBR1-212ENST00000627960 BCS1LQ9Y276 419 aa16.11■□□□□ 0.17
UBR1-212ENST00000627960 DCTN1Q14203 1278 aa16.1■□□□□ 0.17
UBR1-212ENST00000627960 NRXN2Q9P2S2 1712 aa16.1■□□□□ 0.17
UBR1-212ENST00000627960 ARFGEF1Q9Y6D6 1849 aa16.1■□□□□ 0.17
UBR1-212ENST00000627960 ATP10DQ9P241 1426 aa16.1■□□□□ 0.17
UBR1-212ENST00000627960 IL6STP40189 918 aaPredicted RBP16.09■□□□□ 0.17
UBR1-212ENST00000627960 RALBP1Q15311 655 aa16.09■□□□□ 0.17
UBR1-212ENST00000627960 ADCY9O60503 1353 aa16.09■□□□□ 0.17
UBR1-212ENST00000627960 A1BGP04217 495 aa16.08■□□□□ 0.16
UBR1-212ENST00000627960 NEFMP07197 916 aa16.08■□□□□ 0.16
UBR1-212ENST00000627960 PLEKHF1Q96S99 279 aa16.08■□□□□ 0.16
UBR1-212ENST00000627960 PIM2Q9P1W9 311 aa16.08■□□□□ 0.16
UBR1-212ENST00000627960 GIGYF1O75420 1035 aaPredicted RBP16.07■□□□□ 0.16
UBR1-212ENST00000627960 SERPINB2P05120 415 aa16.07■□□□□ 0.16
UBR1-212ENST00000627960 C1QTNF8P60827 252 aa16.07■□□□□ 0.16
UBR1-212ENST00000627960 DDX10Q13206 875 aaKnown RBP16.07■□□□□ 0.16
UBR1-212ENST00000627960 TAF7Q15545 349 aaPredicted RBP16.07■□□□□ 0.16
UBR1-212ENST00000627960 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
UBR1-212ENST00000627960 USP16Q9Y5T5 823 aa16.07■□□□□ 0.16
UBR1-212ENST00000627960 SCN7AQ01118 1682 aa16.06■□□□□ 0.16
UBR1-212ENST00000627960 SNRPA1P09661 255 aaKnown RBP16.06■□□□□ 0.16
UBR1-212ENST00000627960 CHRNA5P30532 468 aa16.06■□□□□ 0.16
UBR1-212ENST00000627960 ARHGAP27Q6ZUM4 889 aa16.06■□□□□ 0.16
UBR1-212ENST00000627960 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
UBR1-212ENST00000627960 ZNF330Q9Y3S2 320 aaPredicted RBP16.06■□□□□ 0.16
UBR1-212ENST00000627960 PRAMEF22A3QJZ6 481 aa16.05■□□□□ 0.16
UBR1-212ENST00000627960 NFE2L2Q16236 605 aa16.05■□□□□ 0.16
UBR1-212ENST00000627960 DALRD3Q5D0E6 543 aaKnown RBP16.05■□□□□ 0.16
UBR1-212ENST00000627960 BICDL1Q6ZP65 573 aa16.05■□□□□ 0.16
UBR1-212ENST00000627960 NPM2Q86SE8 214 aaKnown RBP16.05■□□□□ 0.16
UBR1-212ENST00000627960 TBC1D9BQ66K14 1250 aa16.04■□□□□ 0.16
UBR1-212ENST00000627960 MIS18AQ9NYP9 233 aa16.04■□□□□ 0.16
UBR1-212ENST00000627960 KDM3BQ7LBC6 1761 aa16.04■□□□□ 0.16
UBR1-212ENST00000627960 DLEC1Q9Y238 1755 aa16.04■□□□□ 0.16
UBR1-212ENST00000627960 BCORQ6W2J9 1755 aa16.03■□□□□ 0.16
UBR1-212ENST00000627960 MAPK8IP3Q9UPT6 1336 aa16.03■□□□□ 0.16
UBR1-212ENST00000627960 CAMTA2O94983 1202 aa16.03■□□□□ 0.16
UBR1-212ENST00000627960 PNISRQ8TF01 805 aaKnown RBP16.03■□□□□ 0.16
UBR1-212ENST00000627960 GPBP1L1Q9HC44 474 aaPredicted RBP16.03■□□□□ 0.16
UBR1-212ENST00000627960 PIP4K2AP48426 406 aaPredicted RBP16.02■□□□□ 0.16
UBR1-212ENST00000627960 DZIP3Q86Y13 1208 aaKnown RBP16.02■□□□□ 0.16
UBR1-212ENST00000627960 ZNF526Q8TF50 670 aaPredicted RBP16.02■□□□□ 0.16
UBR1-212ENST00000627960 ANKRD31Q8N7Z5 1873 aa16.01■□□□□ 0.15
UBR1-212ENST00000627960 SBF1O95248 1867 aa16.01■□□□□ 0.15
UBR1-212ENST00000627960 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
UBR1-212ENST00000627960 LAMB4A4D0S4 1761 aa16■□□□□ 0.15
UBR1-212ENST00000627960 MYBBP1AQ9BQG0 1328 aaKnown RBP16■□□□□ 0.15
UBR1-212ENST00000627960 NBPF26B4DH59 902 aa16■□□□□ 0.15
UBR1-212ENST00000627960 NBPF10Q6P3W6 841 aaKnown RBP16■□□□□ 0.15
UBR1-212ENST00000627960 C2CD5Q86YS7 1000 aa16■□□□□ 0.15
UBR1-212ENST00000627960 NBPF15Q8N660 670 aa16■□□□□ 0.15
UBR1-212ENST00000627960 THUMPD2Q9BTF0 503 aaKnown RBP16■□□□□ 0.15
UBR1-212ENST00000627960 H0YIN7 160 aa15.99■□□□□ 0.15
UBR1-212ENST00000627960 PRR5LQ6MZQ0 368 aa15.99■□□□□ 0.15
UBR1-212ENST00000627960 SETDB2Q96T68 719 aa15.99■□□□□ 0.15
UBR1-212ENST00000627960 EIF4A1P60842 406 aaKnown RBP15.98■□□□□ 0.15
UBR1-212ENST00000627960 C9orf131Q5VYM1 1079 aa15.98■□□□□ 0.15
UBR1-212ENST00000627960 CLEC4GQ6UXB4 293 aa15.98■□□□□ 0.15
UBR1-212ENST00000627960 TTLL6Q8N841 843 aa15.98■□□□□ 0.15
UBR1-212ENST00000627960 BRIP1Q9BX63 1249 aa15.98■□□□□ 0.15
UBR1-212ENST00000627960 PDZRN3Q9UPQ7 1066 aa15.98■□□□□ 0.15
UBR1-212ENST00000627960 SENP3-EIF4A1A0A087X0R7 540 aa15.97■□□□□ 0.15
UBR1-212ENST00000627960 PDE6BP35913 854 aa15.97■□□□□ 0.15
UBR1-212ENST00000627960 RIPK4P57078 832 aa15.97■□□□□ 0.15
UBR1-212ENST00000627960 RGL2O15211 777 aa15.96■□□□□ 0.15
UBR1-212ENST00000627960 CCDC24Q8N4L8 307 aa15.96■□□□□ 0.15
UBR1-212ENST00000627960 ZNF652Q9Y2D9 606 aa15.96■□□□□ 0.15
UBR1-212ENST00000627960 CCDC88AQ3V6T2 1871 aa15.95■□□□□ 0.14
UBR1-212ENST00000627960 COL11A2P13942 1736 aaPredicted RBP15.95■□□□□ 0.14
UBR1-212ENST00000627960 KIF3CO14782 793 aa15.95■□□□□ 0.14
UBR1-212ENST00000627960 TMPOP42166 694 aaKnown RBP15.95■□□□□ 0.14
UBR1-212ENST00000627960 CNBD1Q8NA66 436 aa15.95■□□□□ 0.14
UBR1-212ENST00000627960 ST5P78524 1137 aa15.94■□□□□ 0.14
UBR1-212ENST00000627960 ZNF622Q969S3 477 aaKnown RBP eCLIP15.94■□□□□ 0.143e-7■■■■□ 21.4
UBR1-212ENST00000627960 RNF181Q9P0P0 153 aa15.94■□□□□ 0.14
UBR1-212ENST00000627960 NUP98P52948 1817 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms