RNA–Protein interactions for RNA: ENST00000627869.1

CHRNA4-210, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-210ENST00000627869 U2AF1L5P0DN76 240 aaPredicted RBP15.65■□□□□ 0.1
CHRNA4-210ENST00000627869 GYS1P13807 737 aa15.65■□□□□ 0.1
CHRNA4-210ENST00000627869 U2AF1Q01081 240 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHRNA4-210ENST00000627869 INTS5Q6P9B9 1019 aaKnown RBP15.65■□□□□ 0.1
CHRNA4-210ENST00000627869 TNS4Q8IZW8 715 aa15.65■□□□□ 0.1
CHRNA4-210ENST00000627869 TTC5Q8N0Z6 440 aa15.65■□□□□ 0.1
CHRNA4-210ENST00000627869 RSPH6AQ9H0K4 717 aa15.65■□□□□ 0.1
CHRNA4-210ENST00000627869 C10orf71Q711Q0 1435 aa15.65■□□□□ 0.1
CHRNA4-210ENST00000627869 ARHGAP27Q6ZUM4 889 aa15.64■□□□□ 0.09
CHRNA4-210ENST00000627869 VSIG10Q8N0Z9 540 aa15.64■□□□□ 0.09
CHRNA4-210ENST00000627869 IL17REQ8NFR9 667 aa15.64■□□□□ 0.09
CHRNA4-210ENST00000627869 PHACTR3Q96KR7 559 aa15.64■□□□□ 0.09
CHRNA4-210ENST00000627869 CCDC87Q9NVE4 849 aa15.64■□□□□ 0.09
CHRNA4-210ENST00000627869 KCPQ6ZWJ8 1503 aa15.63■□□□□ 0.09
CHRNA4-210ENST00000627869 FCHSD2O94868 740 aa15.63■□□□□ 0.09
CHRNA4-210ENST00000627869 CYP19A1P11511 503 aaPredicted RBP15.63■□□□□ 0.09
CHRNA4-210ENST00000627869 CCER2I3L3R5 266 aa15.62■□□□□ 0.09
CHRNA4-210ENST00000627869 DPEP1P16444 411 aa15.62■□□□□ 0.09
CHRNA4-210ENST00000627869 KCNA3P22001 575 aa15.62■□□□□ 0.09
CHRNA4-210ENST00000627869 TGFB2P61812 414 aa15.62■□□□□ 0.09
CHRNA4-210ENST00000627869 CCDC184Q52MB2 194 aa15.62■□□□□ 0.09
CHRNA4-210ENST00000627869 SRP68Q9UHB9 627 aaKnown RBP15.62■□□□□ 0.09
CHRNA4-210ENST00000627869 PARP3Q9Y6F1 533 aa15.62■□□□□ 0.09
CHRNA4-210ENST00000627869 USP42Q9H9J4 1324 aaKnown RBP15.62■□□□□ 0.09
CHRNA4-210ENST00000627869 ARFGEF1Q9Y6D6 1849 aa15.61■□□□□ 0.09
CHRNA4-210ENST00000627869 ZPR1O75312 459 aa15.61■□□□□ 0.09
CHRNA4-210ENST00000627869 FSTL1Q12841 308 aa15.61■□□□□ 0.09
CHRNA4-210ENST00000627869 C9orf131Q5VYM1 1079 aa15.61■□□□□ 0.09
CHRNA4-210ENST00000627869 ZNF790Q6PG37 636 aa15.61■□□□□ 0.09
CHRNA4-210ENST00000627869 SCN11AQ9UI33 1791 aa15.61■□□□□ 0.09
CHRNA4-210ENST00000627869 C4AP0C0L4 1744 aa15.6■□□□□ 0.09
CHRNA4-210ENST00000627869 STARD3NLO95772 234 aa15.6■□□□□ 0.09
CHRNA4-210ENST00000627869 RTF1Q92541 710 aaKnown RBP15.6■□□□□ 0.09
CHRNA4-210ENST00000627869 SOS1Q07889 1333 aaPredicted RBP15.6■□□□□ 0.09
CHRNA4-210ENST00000627869 FKBP8Q14318 412 aa15.59■□□□□ 0.09
CHRNA4-210ENST00000627869 ZNF496Q96IT1 587 aaPredicted RBP15.59■□□□□ 0.09
CHRNA4-210ENST00000627869 ZBTB1Q9Y2K1 713 aa15.59■□□□□ 0.09
CHRNA4-210ENST00000627869 COL5A3P25940 1745 aaPredicted RBP15.59■□□□□ 0.09
CHRNA4-210ENST00000627869 CEMIPQ8WUJ3 1361 aa15.59■□□□□ 0.09
CHRNA4-210ENST00000627869 BTBD11A6QL63 1104 aa15.58■□□□□ 0.08
CHRNA4-210ENST00000627869 TEX13AQ9BXU3 409 aaPredicted RBP15.58■□□□□ 0.08
CHRNA4-210ENST00000627869 TNRC6CQ9HCJ0 1690 aaKnown RBP15.57■□□□□ 0.08
CHRNA4-210ENST00000627869 ADAMTS7Q9UKP4 1686 aa15.57■□□□□ 0.08
CHRNA4-210ENST00000627869 SBF1O95248 1867 aa15.57■□□□□ 0.08
CHRNA4-210ENST00000627869 NEFMP07197 916 aa15.57■□□□□ 0.08
CHRNA4-210ENST00000627869 CANXP27824 592 aaKnown RBP15.57■□□□□ 0.08
CHRNA4-210ENST00000627869 USPL1Q5W0Q7 1092 aa15.57■□□□□ 0.08
CHRNA4-210ENST00000627869 C16orf71Q8IYS4 520 aaPredicted RBP15.57■□□□□ 0.08
CHRNA4-210ENST00000627869 FMNL2Q96PY5 1086 aa15.57■□□□□ 0.08
CHRNA4-210ENST00000627869 RRAGCQ9HB90 399 aa15.57■□□□□ 0.08
CHRNA4-210ENST00000627869 MCM10Q7L590 875 aa15.56■□□□□ 0.08
CHRNA4-210ENST00000627869 NARFQ9UHQ1 456 aa15.56■□□□□ 0.08
CHRNA4-210ENST00000627869 COL15A1P39059 1388 aa15.56■□□□□ 0.08
CHRNA4-210ENST00000627869 HEG1Q9ULI3 1381 aa15.56■□□□□ 0.08
CHRNA4-210ENST00000627869 TJP1Q07157 1748 aa15.56■□□□□ 0.08
CHRNA4-210ENST00000627869 HTATSF1O43719 755 aaKnown RBP15.55■□□□□ 0.08
CHRNA4-210ENST00000627869 HSPA1AP0DMV8 641 aaKnown RBP15.55■□□□□ 0.08
CHRNA4-210ENST00000627869 HSPA1BP0DMV9 641 aaKnown RBP15.55■□□□□ 0.08
CHRNA4-210ENST00000627869 TM4SF1P30408 202 aa15.55■□□□□ 0.08
CHRNA4-210ENST00000627869 DDR1Q08345 913 aa15.55■□□□□ 0.08
CHRNA4-210ENST00000627869 MYH14Q7Z406 1995 aaKnown RBP15.55■□□□□ 0.08
CHRNA4-210ENST00000627869 A0A087WZG4 1122 aa15.54■□□□□ 0.08
CHRNA4-210ENST00000627869 POLRMTO00411 1230 aaKnown RBP15.54■□□□□ 0.08
CHRNA4-210ENST00000627869 KCNQ3O43525 872 aa15.53■□□□□ 0.08
CHRNA4-210ENST00000627869 EIF5P55010 431 aaKnown RBP15.53■□□□□ 0.08
CHRNA4-210ENST00000627869 DCTN1Q14203 1278 aa15.53■□□□□ 0.08
CHRNA4-210ENST00000627869 NPM2Q86SE8 214 aaKnown RBP15.53■□□□□ 0.08
CHRNA4-210ENST00000627869 PNISRQ8TF01 805 aaKnown RBP15.53■□□□□ 0.08
CHRNA4-210ENST00000627869 PNNQ9H307 717 aaKnown RBP15.53■□□□□ 0.08
CHRNA4-210ENST00000627869 RNF181Q9P0P0 153 aa15.53■□□□□ 0.08
CHRNA4-210ENST00000627869 KDM2BQ8NHM5 1336 aa15.52■□□□□ 0.08
CHRNA4-210ENST00000627869 NFIXQ14938 502 aa15.52■□□□□ 0.08
CHRNA4-210ENST00000627869 ZNF330Q9Y3S2 320 aaPredicted RBP15.52■□□□□ 0.08
CHRNA4-210ENST00000627869 IL6STP40189 918 aaPredicted RBP15.51■□□□□ 0.07
CHRNA4-210ENST00000627869 BCL2L12Q9HB09 334 aa15.51■□□□□ 0.07
CHRNA4-210ENST00000627869 A1BGP04217 495 aa15.5■□□□□ 0.07
CHRNA4-210ENST00000627869 SNRPA1P09661 255 aaKnown RBP15.5■□□□□ 0.07
CHRNA4-210ENST00000627869 TAF7Q15545 349 aaPredicted RBP15.5■□□□□ 0.07
CHRNA4-210ENST00000627869 SMC1BQ8NDV3 1235 aa15.5■□□□□ 0.07
CHRNA4-210ENST00000627869 PLEKHF1Q96S99 279 aa15.5■□□□□ 0.07
CHRNA4-210ENST00000627869 PIM2Q9P1W9 311 aa15.5■□□□□ 0.07
CHRNA4-210ENST00000627869 MAPK8IP3Q9UPT6 1336 aa15.49■□□□□ 0.07
CHRNA4-210ENST00000627869 SERPINB2P05120 415 aa15.49■□□□□ 0.07
CHRNA4-210ENST00000627869 CHRNA5P30532 468 aa15.49■□□□□ 0.07
CHRNA4-210ENST00000627869 NFE2L2Q16236 605 aa15.49■□□□□ 0.07
CHRNA4-210ENST00000627869 MRS2Q9HD23 443 aa15.49■□□□□ 0.07
CHRNA4-210ENST00000627869 TBC1D2BQ9UPU7 963 aa15.49■□□□□ 0.07
CHRNA4-210ENST00000627869 USP16Q9Y5T5 823 aa15.49■□□□□ 0.07
CHRNA4-210ENST00000627869 RASSF7Q02833 373 aa15.48■□□□□ 0.07
CHRNA4-210ENST00000627869 DALRD3Q5D0E6 543 aaKnown RBP15.48■□□□□ 0.07
CHRNA4-210ENST00000627869 BICDL1Q6ZP65 573 aa15.48■□□□□ 0.07
CHRNA4-210ENST00000627869 UBR2Q8IWV8 1755 aa15.48■□□□□ 0.07
CHRNA4-210ENST00000627869 PRAMEF22A3QJZ6 481 aa15.46■□□□□ 0.07
CHRNA4-210ENST00000627869 SLC34A2O95436 690 aa15.46■□□□□ 0.07
CHRNA4-210ENST00000627869 TBC1D9BQ66K14 1250 aa15.46■□□□□ 0.07
CHRNA4-210ENST00000627869 MIS18AQ9NYP9 233 aa15.46■□□□□ 0.07
CHRNA4-210ENST00000627869 POTECB2RU33 542 aa15.45■□□□□ 0.06
CHRNA4-210ENST00000627869 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
CHRNA4-210ENST00000627869 TIAM2Q8IVF5 1701 aa15.44■□□□□ 0.06
CHRNA4-210ENST00000627869 CAMTA2O94983 1202 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms