RNA–Protein interactions for RNA: ENST00000627212.2

RAPGEF6-215, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-215ENST00000627212 SLC3A2P08195 630 aaKnown RBP11.65□□□□□ -0.54
RAPGEF6-215ENST00000627212 KRT24Q2M2I5 525 aa11.65□□□□□ -0.54
RAPGEF6-215ENST00000627212 CCDC191Q8NCU4 936 aa11.65□□□□□ -0.54
RAPGEF6-215ENST00000627212 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.65□□□□□ -0.54
RAPGEF6-215ENST00000627212 CNPY2Q9Y2B0 182 aa11.65□□□□□ -0.54
RAPGEF6-215ENST00000627212 V9GYY5 206 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF6-215ENST00000627212 ZGPATQ8N5A5 531 aaKnown RBP11.65□□□□□ -0.54
RAPGEF6-215ENST00000627212 CDKL5O76039 1030 aa11.65□□□□□ -0.55
RAPGEF6-215ENST00000627212 TOP1P11387 765 aaKnown RBP11.65□□□□□ -0.55
RAPGEF6-215ENST00000627212 TMC6Q7Z403 805 aa11.65□□□□□ -0.55
RAPGEF6-215ENST00000627212 KIAA1328Q86T90 577 aa11.65□□□□□ -0.55
RAPGEF6-215ENST00000627212 SEPT11Q9NVA2 429 aaKnown RBP11.65□□□□□ -0.55
RAPGEF6-215ENST00000627212 FOXO3O43524 673 aa11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 EIF3JO75822 258 aaKnown RBP11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 NEFHP12036 1026 aa11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 NUCB1Q02818 461 aa11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 SH2B1Q9NRF2 756 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 NOL7Q9UMY1 257 aaKnown RBP11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 TOP2BQ02880 1626 aa11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 CLCN1P35523 988 aa11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 GNL3LQ9NVN8 582 aaKnown RBP11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 RPRD2Q5VT52 1461 aaKnown RBP11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 PCF11O94913 1555 aaKnown RBP11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 GTF2F1P35269 517 aaKnown RBP eCLIP11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 USP5P45974 858 aa11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 ECHDC1Q9NTX5 307 aa11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 TOPBP1Q92547 1522 aa11.64□□□□□ -0.55
RAPGEF6-215ENST00000627212 C8orf58Q8NAV2 365 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 MAP3K1Q13233 1512 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 A0A087WZG4 1122 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 GOLIM4O00461 696 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 KIAA0754O94854 1291 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 PLB1Q6P1J6 1458 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 PTPRKQ15262 1439 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 GOLGA6L10A6NI86 522 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 SOGA3Q5TF21 947 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 GOLGA8BA8MQT2 603 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 TSPYL6Q8N831 410 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 ZBTB3Q9H5J0 574 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 PODXL2Q9NZ53 605 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 ABCC11Q96J66 1382 aa11.63□□□□□ -0.55
RAPGEF6-215ENST00000627212 CCDC186Q7Z3E2 898 aa11.62□□□□□ -0.55
RAPGEF6-215ENST00000627212 SYCP1Q15431 976 aa11.62□□□□□ -0.55
RAPGEF6-215ENST00000627212 LARP1Q6PKG0 1096 aaKnown RBP11.62□□□□□ -0.55
RAPGEF6-215ENST00000627212 USP48Q86UV5 1035 aa11.62□□□□□ -0.55
RAPGEF6-215ENST00000627212 THEMISQ8N1K5 641 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF6-215ENST00000627212 BRF1Q92994 677 aa11.62□□□□□ -0.55
RAPGEF6-215ENST00000627212 RPGRIP1LQ68CZ1 1315 aa11.62□□□□□ -0.55
RAPGEF6-215ENST00000627212 ZSCAN25Q6NSZ9 544 aa11.62□□□□□ -0.55
RAPGEF6-215ENST00000627212 LRSAM1Q6UWE0 723 aa11.62□□□□□ -0.55
RAPGEF6-215ENST00000627212 DDX46Q7L014 1031 aaKnown RBP11.62□□□□□ -0.55
RAPGEF6-215ENST00000627212 NAPBQ9H115 298 aa11.62□□□□□ -0.55
RAPGEF6-215ENST00000627212 PLEKHH1Q9ULM0 1364 aa11.62□□□□□ -0.55
RAPGEF6-215ENST00000627212 SUPT6HQ7KZ85 1726 aaKnown RBP11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 GPTP24298 496 aa11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 HDAC1Q13547 482 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 UBE3BQ7Z3V4 1068 aa11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 MICU3Q86XE3 530 aa11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 CNNM3Q8NE01 707 aa11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 CRACR2AQ9BSW2 395 aa11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 PDE1AP54750 535 aa11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 UBE2HP62256 183 aa11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■■■■■ 92.8
RAPGEF6-215ENST00000627212 NUTM2BA6NNL0 878 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 NUTM2EB1AL46 878 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 DNM1Q05193 864 aaKnown RBP11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 NUTM2AQ8IVF1 878 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 MAP3K2Q9Y2U5 619 aa11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 USP16Q9Y5T5 823 aa11.61□□□□□ -0.55
RAPGEF6-215ENST00000627212 ZRANB1Q9UGI0 708 aa11.6□□□□□ -0.55
RAPGEF6-215ENST00000627212 RANBP6O60518 1105 aaKnown RBP11.6□□□□□ -0.55
RAPGEF6-215ENST00000627212 NOLC1Q14978 699 aaKnown RBP eCLIP11.6□□□□□ -0.55
RAPGEF6-215ENST00000627212 RHPN1Q8TCX5 695 aa11.6□□□□□ -0.55
RAPGEF6-215ENST00000627212 DDX19AQ9NUU7 478 aaKnown RBP11.6□□□□□ -0.55
RAPGEF6-215ENST00000627212 SLC4A8Q2Y0W8 1093 aa11.6□□□□□ -0.55
RAPGEF6-215ENST00000627212 DACT1Q9NYF0 836 aa11.6□□□□□ -0.55
RAPGEF6-215ENST00000627212 ORC3Q9UBD5 711 aaPredicted RBP11.6□□□□□ -0.55
RAPGEF6-215ENST00000627212 ZNF213O14771 459 aa11.6□□□□□ -0.55
RAPGEF6-215ENST00000627212 CAMSAP2Q08AD1 1489 aa11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 DBF4Q9UBU7 674 aaPredicted RBP11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 ANKRD62A6NC57 917 aa11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 TMEM132AQ24JP5 1023 aa11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 RRAGDQ9NQL2 400 aaPredicted RBP11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 SNAPC4Q5SXM2 1469 aa11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 IFIT3O14879 490 aaKnown RBP11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 ZSCAN12O43309 604 aa11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 ZSCAN22P10073 491 aaPredicted RBP11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 CPA1P15085 419 aa11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 MEX3CQ5U5Q3 659 aaKnown RBP11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 JAKMIP3Q5VZ66 844 aa11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 ZSCAN29Q8IWY8 852 aaPredicted RBP11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 MAPKBP1O60336 1514 aa11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 WASLO00401 505 aaPredicted RBP11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 KIF5CO60282 957 aa11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 ANO6Q4KMQ2 910 aa11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 DNAJC25Q9H1X3 360 aa11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 LUC7LQ9NQ29 371 aaKnown RBP11.59□□□□□ -0.55
RAPGEF6-215ENST00000627212 PLEKHH2Q8IVE3 1493 aa11.58□□□□□ -0.55
RAPGEF6-215ENST00000627212 CASQ1P31415 396 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms