RNA–Protein interactions for RNA: ENST00000625586.1

LINC02028-222, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 233 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-222	ENST00000625586	TGFB2	P61812	414 aa		18.96	■□□□□ 0.63
LINC02028-222	ENST00000625586	GNAI1	P63096	354 aa		18.96	■□□□□ 0.63
LINC02028-222	ENST00000625586	IFT57	Q9NWB7	429 aa		18.96	■□□□□ 0.63
LINC02028-222	ENST00000625586	WDR90	Q96KV7	1748 aa		18.95	■□□□□ 0.62
LINC02028-222	ENST00000625586	LINC00116	Q8NCU8	138 aa		18.95	■□□□□ 0.62
LINC02028-222	ENST00000625586	ZNF853	P0CG23	659 aa		18.94	■□□□□ 0.62
LINC02028-222	ENST00000625586	IFNL2	Q8IZJ0	200 aa		18.94	■□□□□ 0.62
LINC02028-222	ENST00000625586	IL17RE	Q8NFR9	667 aa		18.94	■□□□□ 0.62
LINC02028-222	ENST00000625586	CFAP44	Q96MT7	982 aa		18.94	■□□□□ 0.62
LINC02028-222	ENST00000625586	GNPAT	O15228	680 aa		18.93	■□□□□ 0.62
LINC02028-222	ENST00000625586	MMP10	P09238	476 aa		18.93	■□□□□ 0.62
LINC02028-222	ENST00000625586	PHKG2	P15735	406 aa		18.93	■□□□□ 0.62
LINC02028-222	ENST00000625586	LAS1L	Q9Y4W2	734 aa	Known RBP	18.93	■□□□□ 0.62
LINC02028-222	ENST00000625586	C10orf71	Q711Q0	1435 aa		18.92	■□□□□ 0.62
LINC02028-222	ENST00000625586	RBM46	Q8TBY0	533 aa	Known RBP	18.92	■□□□□ 0.62
LINC02028-222	ENST00000625586	FANCI	Q9NVI1	1328 aa		18.92	■□□□□ 0.62
LINC02028-222	ENST00000625586	DLG5	Q8TDM6	1919 aa		18.92	■□□□□ 0.62
LINC02028-222	ENST00000625586	RNMT	O43148	476 aa	Known RBP	18.91	■□□□□ 0.62
LINC02028-222	ENST00000625586	HSP90AB1	P08238	724 aa	Known RBP	18.91	■□□□□ 0.62
LINC02028-222	ENST00000625586	SMIM5	Q71RC9	77 aa		18.91	■□□□□ 0.62
LINC02028-222	ENST00000625586	TSR2	Q969E8	191 aa	Known RBP	18.91	■□□□□ 0.62
LINC02028-222	ENST00000625586	TMOD3	Q9NYL9	352 aa		18.91	■□□□□ 0.62
LINC02028-222	ENST00000625586	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.91	■□□□□ 0.62
LINC02028-222	ENST00000625586	BRCA1	P38398	1863 aa	Known RBP	18.9	■□□□□ 0.62
LINC02028-222	ENST00000625586	ZNF831	Q5JPB2	1677 aa		18.9	■□□□□ 0.62
LINC02028-222	ENST00000625586	CHL1	O00533	1208 aa		18.9	■□□□□ 0.62
LINC02028-222	ENST00000625586	NLGN1	Q8N2Q7	840 aa		18.9	■□□□□ 0.62
LINC02028-222	ENST00000625586	LGR6	Q9HBX8	967 aa		18.9	■□□□□ 0.62
LINC02028-222	ENST00000625586	BCS1L	Q9Y276	419 aa		18.9	■□□□□ 0.62
LINC02028-222	ENST00000625586	CEMIP	Q8WUJ3	1361 aa		18.9	■□□□□ 0.62
LINC02028-222	ENST00000625586	PCNT	O95613	3336 aa		18.89	■□□□□ 0.62
LINC02028-222	ENST00000625586	ITPK1	Q13572	414 aa		18.89	■□□□□ 0.61
LINC02028-222	ENST00000625586	TAF7	Q15545	349 aa	Predicted RBP	18.89	■□□□□ 0.61
LINC02028-222	ENST00000625586	JMY	Q8N9B5	988 aa		18.89	■□□□□ 0.61
LINC02028-222	ENST00000625586	NMRK2	Q9NPI5	230 aa		18.89	■□□□□ 0.61
LINC02028-222	ENST00000625586	MBIP	Q9NS73	344 aa		18.89	■□□□□ 0.61
LINC02028-222	ENST00000625586	BABAM1	Q9NWV8	329 aa		18.89	■□□□□ 0.61
LINC02028-222	ENST00000625586	RCAN3	Q9UKA8	241 aa		18.89	■□□□□ 0.61
LINC02028-222	ENST00000625586	ADRA2B	P18089	450 aa		18.88	■□□□□ 0.61
LINC02028-222	ENST00000625586	ATP6V1A	P38606	617 aa		18.88	■□□□□ 0.61
LINC02028-222	ENST00000625586	FSTL1	Q12841	308 aa		18.88	■□□□□ 0.61
LINC02028-222	ENST00000625586	KLRG1	Q96E93	195 aa		18.88	■□□□□ 0.61
LINC02028-222	ENST00000625586	ARFGEF1	Q9Y6D6	1849 aa		18.88	■□□□□ 0.61
LINC02028-222	ENST00000625586	C4A	P0C0L4	1744 aa		18.87	■□□□□ 0.61
LINC02028-222	ENST00000625586	EXOSC9	Q06265	439 aa	Known RBP	18.87	■□□□□ 0.61
LINC02028-222	ENST00000625586	TEF	Q10587	303 aa		18.87	■□□□□ 0.61
LINC02028-222	ENST00000625586	ARHGAP27	Q6ZUM4	889 aa		18.87	■□□□□ 0.61
LINC02028-222	ENST00000625586	DCAF5	Q96JK2	942 aa		18.87	■□□□□ 0.61
LINC02028-222	ENST00000625586	CCDC87	Q9NVE4	849 aa		18.87	■□□□□ 0.61
LINC02028-222	ENST00000625586	ASAP1	Q9ULH1	1129 aa		18.87	■□□□□ 0.61
LINC02028-222	ENST00000625586	RTCB	Q9Y3I0	505 aa	Known RBP	18.87	■□□□□ 0.61
LINC02028-222	ENST00000625586		A0A0G2JLW4	131 aa		18.86	■□□□□ 0.61
LINC02028-222	ENST00000625586	CT47B1	P0C2W7	299 aa	Predicted RBP	18.86	■□□□□ 0.61
LINC02028-222	ENST00000625586	TRAPPC3L	Q5T215	181 aa		18.86	■□□□□ 0.61
LINC02028-222	ENST00000625586	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.86	■□□□□ 0.61
LINC02028-222	ENST00000625586	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.86	■□□□□ 0.61
LINC02028-222	ENST00000625586	TSPYL4	Q9UJ04	414 aa		18.85	■□□□□ 0.61
LINC02028-222	ENST00000625586	KDM2B	Q8NHM5	1336 aa		18.84	■□□□□ 0.61
LINC02028-222	ENST00000625586	ATG3	Q9NT62	314 aa		18.84	■□□□□ 0.61
LINC02028-222	ENST00000625586	COL5A3	P25940	1745 aa	Predicted RBP	18.83	■□□□□ 0.61
LINC02028-222	ENST00000625586	DPEP1	P16444	411 aa		18.83	■□□□□ 0.6
LINC02028-222	ENST00000625586	RC3H1	Q5TC82	1133 aa	Known RBP	18.83	■□□□□ 0.6
LINC02028-222	ENST00000625586	MIS18A	Q9NYP9	233 aa		18.83	■□□□□ 0.6
LINC02028-222	ENST00000625586	KDM6A	O15550	1401 aa	Predicted RBP	18.83	■□□□□ 0.6
LINC02028-222	ENST00000625586	TNRC6C	Q9HCJ0	1690 aa	Known RBP	18.82	■□□□□ 0.6
LINC02028-222	ENST00000625586	CNTNAP4	Q9C0A0	1308 aa		18.82	■□□□□ 0.6
LINC02028-222	ENST00000625586	COL13A1	Q5TAT6	717 aa	Predicted RBP	18.82	■□□□□ 0.6
LINC02028-222	ENST00000625586	C9orf131	Q5VYM1	1079 aa		18.82	■□□□□ 0.6
LINC02028-222	ENST00000625586	SLC52A2	Q9HAB3	445 aa		18.82	■□□□□ 0.6
LINC02028-222	ENST00000625586	BTBD11	A6QL63	1104 aa		18.81	■□□□□ 0.6
LINC02028-222	ENST00000625586	ERVV-2	B6SEH9	535 aa		18.81	■□□□□ 0.6
LINC02028-222	ENST00000625586	PARP3	Q9Y6F1	533 aa		18.81	■□□□□ 0.6
LINC02028-222	ENST00000625586	ADAMTS7	Q9UKP4	1686 aa		18.8	■□□□□ 0.6
LINC02028-222	ENST00000625586	GYS1	P13807	737 aa		18.8	■□□□□ 0.6
LINC02028-222	ENST00000625586	RFC4	P35249	363 aa		18.8	■□□□□ 0.6
LINC02028-222	ENST00000625586	ARHGEF1	Q92888	912 aa	Known RBP	18.8	■□□□□ 0.6
LINC02028-222	ENST00000625586	RNF123	Q5XPI4	1314 aa		18.79	■□□□□ 0.6
LINC02028-222	ENST00000625586	KCNA3	P22001	575 aa		18.79	■□□□□ 0.6
LINC02028-222	ENST00000625586	CABP4	P57796	275 aa		18.79	■□□□□ 0.6
LINC02028-222	ENST00000625586	C8orf58	Q8NAV2	365 aa		18.79	■□□□□ 0.6
LINC02028-222	ENST00000625586	ZNF428	Q96B54	188 aa		18.79	■□□□□ 0.6
LINC02028-222	ENST00000625586	PIM2	Q9P1W9	311 aa		18.79	■□□□□ 0.6
LINC02028-222	ENST00000625586	KCP	Q6ZWJ8	1503 aa		18.79	■□□□□ 0.6
LINC02028-222	ENST00000625586	ZC3H4	Q9UPT8	1303 aa	Known RBP	18.78	■□□□□ 0.6
LINC02028-222	ENST00000625586	VAMP4	O75379	141 aa		18.78	■□□□□ 0.6
LINC02028-222	ENST00000625586	RPS6KA4	O75676	772 aa		18.78	■□□□□ 0.6
LINC02028-222	ENST00000625586	RARS	P54136	660 aa	Known RBP	18.78	■□□□□ 0.6
LINC02028-222	ENST00000625586	TWISTNB	Q3B726	338 aa	Predicted RBP	18.78	■□□□□ 0.6
LINC02028-222	ENST00000625586	NFATC2IP	Q8NCF5	419 aa		18.78	■□□□□ 0.6
LINC02028-222	ENST00000625586	DALRD3	Q5D0E6	543 aa	Known RBP	18.77	■□□□□ 0.6
LINC02028-222	ENST00000625586	TNS4	Q8IZW8	715 aa		18.77	■□□□□ 0.6
LINC02028-222	ENST00000625586	TSPYL6	Q8N831	410 aa		18.77	■□□□□ 0.6
LINC02028-222	ENST00000625586	SLC4A9	Q96Q91	983 aa		18.77	■□□□□ 0.6
LINC02028-222	ENST00000625586	ELL2	O00472	640 aa	Predicted RBP	18.76	■□□□□ 0.59
LINC02028-222	ENST00000625586	NEFL	P07196	543 aa		18.76	■□□□□ 0.59
LINC02028-222	ENST00000625586	PRELP	P51888	382 aa		18.76	■□□□□ 0.59
LINC02028-222	ENST00000625586	RRP1	P56182	461 aa	Known RBP	18.76	■□□□□ 0.59
LINC02028-222	ENST00000625586	HTRA3	P83110	453 aa		18.76	■□□□□ 0.59
LINC02028-222	ENST00000625586	SMC1B	Q8NDV3	1235 aa		18.76	■□□□□ 0.59
LINC02028-222	ENST00000625586	MRC1	P22897	1456 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms