RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 ANKRD45Q5TZF3 282 aa24.62■■□□□ 1.53
TREX1-205ENST00000625293 MRC1P22897 1456 aa24.61■■□□□ 1.53
TREX1-205ENST00000625293 SCN11AQ9UI33 1791 aa24.61■■□□□ 1.53
TREX1-205ENST00000625293 ZBTB47Q9UFB7 747 aaPredicted RBP24.61■■□□□ 1.53
TREX1-205ENST00000625293 EP400Q96L91 3159 aa24.61■■□□□ 1.53
TREX1-205ENST00000625293 PHAXQ9H814 394 aaKnown RBP24.6■■□□□ 1.53
TREX1-205ENST00000625293 WDR17Q8IZU2 1322 aa24.6■■□□□ 1.53
TREX1-205ENST00000625293 A0A0G2JS52 829 aa24.59■■□□□ 1.53
TREX1-205ENST00000625293 ONECUT3O60422 494 aaPredicted RBP24.59■■□□□ 1.53
TREX1-205ENST00000625293 GIGYF1O75420 1035 aaPredicted RBP24.59■■□□□ 1.53
TREX1-205ENST00000625293 MYT1Q01538 1121 aa24.59■■□□□ 1.53
TREX1-205ENST00000625293 IFNL2Q8IZJ0 200 aa24.59■■□□□ 1.53
TREX1-205ENST00000625293 DDRGK1Q96HY6 314 aa24.59■■□□□ 1.53
TREX1-205ENST00000625293 EIF2S2P20042 333 aaKnown RBP24.59■■□□□ 1.53
TREX1-205ENST00000625293 SLC52A2Q9HAB3 445 aa24.59■■□□□ 1.53
TREX1-205ENST00000625293 CHPF2Q9P2E5 772 aa24.59■■□□□ 1.53
TREX1-205ENST00000625293 CYP27B1O15528 508 aa24.57■■□□□ 1.52
TREX1-205ENST00000625293 TOM1L2Q6ZVM7 507 aa24.57■■□□□ 1.52
TREX1-205ENST00000625293 ERICH6Q7L0X2 663 aa24.57■■□□□ 1.52
TREX1-205ENST00000625293 GNAI2P04899 355 aa24.55■■□□□ 1.52
TREX1-205ENST00000625293 GNAI3P08754 354 aa24.54■■□□□ 1.52
TREX1-205ENST00000625293 FAM182BQ5T319 152 aa24.54■■□□□ 1.52
TREX1-205ENST00000625293 DCAF5Q96JK2 942 aa24.54■■□□□ 1.52
TREX1-205ENST00000625293 PARP4Q9UKK3 1724 aaKnown RBP24.54■■□□□ 1.52
TREX1-205ENST00000625293 DBF4Q9UBU7 674 aaPredicted RBP24.54■■□□□ 1.52
TREX1-205ENST00000625293 BMP2KLQ5H9B9 411 aa24.53■■□□□ 1.52
TREX1-205ENST00000625293 ZNF790Q6PG37 636 aa24.53■■□□□ 1.52
TREX1-205ENST00000625293 BRWD3Q6RI45 1802 aa24.52■■□□□ 1.52
TREX1-205ENST00000625293 HMMRO75330 724 aa24.52■■□□□ 1.52
TREX1-205ENST00000625293 HSP90AB1P08238 724 aaKnown RBP24.52■■□□□ 1.52
TREX1-205ENST00000625293 USP44Q9H0E7 712 aa24.52■■□□□ 1.52
TREX1-205ENST00000625293 ADCY9O60503 1353 aa24.51■■□□□ 1.51
TREX1-205ENST00000625293 PRAMEF22A3QJZ6 481 aa24.51■■□□□ 1.51
TREX1-205ENST00000625293 NFATC2IPQ8NCF5 419 aa24.5■■□□□ 1.51
TREX1-205ENST00000625293 CARD10Q9BWT7 1032 aa24.5■■□□□ 1.51
TREX1-205ENST00000625293 ANXA1P04083 346 aa24.49■■□□□ 1.51
TREX1-205ENST00000625293 BEND3Q5T5X7 828 aa24.49■■□□□ 1.51
TREX1-205ENST00000625293 DNAAF4Q8WXU2 420 aa24.49■■□□□ 1.51
TREX1-205ENST00000625293 SLC39A6Q13433 755 aa24.49■■□□□ 1.51
TREX1-205ENST00000625293 BARGINQ6ZT62 677 aa24.49■■□□□ 1.51
TREX1-205ENST00000625293 TBC1D32Q96NH3 1257 aa24.49■■□□□ 1.51
TREX1-205ENST00000625293 SRCIN1Q9C0H9 1055 aa24.49■■□□□ 1.51
TREX1-205ENST00000625293 PI4KAP2A4QPH2 592 aa24.48■■□□□ 1.51
TREX1-205ENST00000625293 PROSER3Q2NL68 480 aa24.48■■□□□ 1.51
TREX1-205ENST00000625293 KRT27Q7Z3Y8 459 aa24.48■■□□□ 1.51
TREX1-205ENST00000625293 PLEKHM2Q8IWE5 1019 aa24.48■■□□□ 1.51
TREX1-205ENST00000625293 PI4KAP1Q8N8J0 262 aa24.48■■□□□ 1.51
TREX1-205ENST00000625293 UPF1Q92900 1129 aaKnown RBP eCLIP24.48■■□□□ 1.51
TREX1-205ENST00000625293 ATP8B2P98198 1209 aa24.47■■□□□ 1.51
TREX1-205ENST00000625293 C5P01031 1676 aa24.47■■□□□ 1.51
TREX1-205ENST00000625293 PDIA6Q15084 440 aa24.47■■□□□ 1.51
TREX1-205ENST00000625293 UPF2Q9HAU5 1272 aaKnown RBP24.46■■□□□ 1.51
TREX1-205ENST00000625293 HYPKQ9NX55 129 aa24.46■■□□□ 1.51
TREX1-205ENST00000625293 PCDH11XQ9BZA7 1347 aa24.45■■□□□ 1.51
TREX1-205ENST00000625293 PCDH11YQ9BZA8 1340 aa24.45■■□□□ 1.51
TREX1-205ENST00000625293 DDX21Q9NR30 783 aaKnown RBP eCLIP24.45■■□□□ 1.5
TREX1-205ENST00000625293 THRAP3Q9Y2W1 955 aaKnown RBP24.45■■□□□ 1.5
TREX1-205ENST00000625293 LRRFIP2Q9Y608 721 aaKnown RBP24.45■■□□□ 1.5
TREX1-205ENST00000625293 UBTFL1P0CB47 393 aaPredicted RBP24.44■■□□□ 1.5
TREX1-205ENST00000625293 ZCRB1Q8TBF4 217 aaKnown RBP24.44■■□□□ 1.5
TREX1-205ENST00000625293 THSD7AQ9UPZ6 1657 aa24.44■■□□□ 1.5
TREX1-205ENST00000625293 ZNF496Q96IT1 587 aaPredicted RBP24.44■■□□□ 1.5
TREX1-205ENST00000625293 PNMA6EA0A0J9YXQ4 647 aa24.43■■□□□ 1.5
TREX1-205ENST00000625293 IL2RBP14784 551 aa24.43■■□□□ 1.5
TREX1-205ENST00000625293 NKX1-1Q15270 411 aaPredicted RBP24.43■■□□□ 1.5
TREX1-205ENST00000625293 KSR2Q6VAB6 950 aa24.43■■□□□ 1.5
TREX1-205ENST00000625293 C16orf71Q8IYS4 520 aaPredicted RBP24.42■■□□□ 1.5
TREX1-205ENST00000625293 SHANK3Q9BYB0 1731 aa24.42■■□□□ 1.5
TREX1-205ENST00000625293 GSPT1P15170 499 aaKnown RBP24.42■■□□□ 1.5
TREX1-205ENST00000625293 SMARCA5O60264 1052 aaPredicted RBP24.41■■□□□ 1.5
TREX1-205ENST00000625293 CABP4P57796 275 aa24.4■■□□□ 1.5
TREX1-205ENST00000625293 OTUD7AQ8TE49 926 aaPredicted RBP24.4■■□□□ 1.5
TREX1-205ENST00000625293 MAP3K2Q9Y2U5 619 aa24.4■■□□□ 1.5
TREX1-205ENST00000625293 ALDH1L1O75891 902 aa24.39■■□□□ 1.5
TREX1-205ENST00000625293 TTC22Q5TAA0 569 aa24.39■■□□□ 1.5
TREX1-205ENST00000625293 SSH3Q8TE77 659 aa24.39■■□□□ 1.5
TREX1-205ENST00000625293 IBTKQ9P2D0 1353 aaPredicted RBP24.39■■□□□ 1.5
TREX1-205ENST00000625293 SNRPA1P09661 255 aaKnown RBP24.39■■□□□ 1.49
TREX1-205ENST00000625293 TTC5Q8N0Z6 440 aa24.39■■□□□ 1.49
TREX1-205ENST00000625293 FMNL2Q96PY5 1086 aa24.39■■□□□ 1.49
TREX1-205ENST00000625293 ERVV-2B6SEH9 535 aa24.38■■□□□ 1.49
TREX1-205ENST00000625293 NBPF7P0C2Y1 421 aaPredicted RBP24.38■■□□□ 1.49
TREX1-205ENST00000625293 MFAP1P55081 439 aaKnown RBP24.38■■□□□ 1.49
TREX1-205ENST00000625293 POLA2Q14181 598 aa24.38■■□□□ 1.49
TREX1-205ENST00000625293 LRP10Q7Z4F1 713 aa24.38■■□□□ 1.49
TREX1-205ENST00000625293 EXOC6BQ9Y2D4 811 aa24.37■■□□□ 1.49
TREX1-205ENST00000625293 DDB1Q16531 1140 aa24.37■■□□□ 1.49
TREX1-205ENST00000625293 PAPPAQ13219 1627 aa24.36■■□□□ 1.49
TREX1-205ENST00000625293 DISP2A7MBM2 1401 aa24.36■■□□□ 1.49
TREX1-205ENST00000625293 SALL3Q9BXA9 1300 aa24.36■■□□□ 1.49
TREX1-205ENST00000625293 C22orf23Q9BZE7 217 aa24.36■■□□□ 1.49
TREX1-205ENST00000625293 OSBPL3Q9H4L5 887 aa24.36■■□□□ 1.49
TREX1-205ENST00000625293 APBB1O00213 710 aa24.35■■□□□ 1.49
TREX1-205ENST00000625293 DDX58O95786 925 aaKnown RBP24.35■■□□□ 1.49
TREX1-205ENST00000625293 SLC4A3P48751 1232 aa24.35■■□□□ 1.49
TREX1-205ENST00000625293 USP16Q9Y5T5 823 aa24.35■■□□□ 1.49
TREX1-205ENST00000625293 TBC1D9Q6ZT07 1266 aa24.34■■□□□ 1.49
TREX1-205ENST00000625293 LAMB4A4D0S4 1761 aa24.34■■□□□ 1.49
TREX1-205ENST00000625293 UBR2Q8IWV8 1755 aa24.34■■□□□ 1.49
TREX1-205ENST00000625293 PPP1R42Q7Z4L9 355 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms