RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 RUNDC1Q96C34 613 aa12.61□□□□□ -0.39
LINC01560-202ENST00000624822 STK32BQ9NY57 414 aa12.61□□□□□ -0.39
LINC01560-202ENST00000624822 COL5A3P25940 1745 aaPredicted RBP12.61□□□□□ -0.39
LINC01560-202ENST00000624822 C4BP0C0L5 1744 aa12.6□□□□□ -0.39
LINC01560-202ENST00000624822 QSER1Q2KHR3 1735 aa12.6□□□□□ -0.39
LINC01560-202ENST00000624822 DCTN1Q14203 1278 aa12.6□□□□□ -0.39
LINC01560-202ENST00000624822 DIEXFQ68CQ4 756 aaKnown RBP12.6□□□□□ -0.39
LINC01560-202ENST00000624822 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
LINC01560-202ENST00000624822 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
LINC01560-202ENST00000624822 LRRC4BQ9NT99 713 aa12.6□□□□□ -0.39
LINC01560-202ENST00000624822 ZNF831Q5JPB2 1677 aa12.6□□□□□ -0.39
LINC01560-202ENST00000624822 TJP1Q07157 1748 aa12.59□□□□□ -0.39
LINC01560-202ENST00000624822 PTCD1O75127 700 aaKnown RBP12.59□□□□□ -0.39
LINC01560-202ENST00000624822 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
LINC01560-202ENST00000624822 RIPK4P57078 832 aa12.59□□□□□ -0.39
LINC01560-202ENST00000624822 TTC5Q8N0Z6 440 aa12.59□□□□□ -0.39
LINC01560-202ENST00000624822 ANO8Q9HCE9 1232 aaPredicted RBP12.59□□□□□ -0.39
LINC01560-202ENST00000624822 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
LINC01560-202ENST00000624822 LOC102724428A0A0B4J2F2 783 aa12.58□□□□□ -0.4
LINC01560-202ENST00000624822 HTATSF1O43719 755 aaKnown RBP12.58□□□□□ -0.4
LINC01560-202ENST00000624822 SIK1P57059 783 aa12.58□□□□□ -0.4
LINC01560-202ENST00000624822 SLC39A6Q13433 755 aa12.58□□□□□ -0.4
LINC01560-202ENST00000624822 KDM3BQ7LBC6 1761 aa12.58□□□□□ -0.4
LINC01560-202ENST00000624822 CEMIPQ8WUJ3 1361 aa12.57□□□□□ -0.4
LINC01560-202ENST00000624822 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
LINC01560-202ENST00000624822 BTBD11A6QL63 1104 aa12.57□□□□□ -0.4
LINC01560-202ENST00000624822 TMPOP42166 694 aaKnown RBP12.57□□□□□ -0.4
LINC01560-202ENST00000624822 LMOD3Q0VAK6 560 aa12.57□□□□□ -0.4
LINC01560-202ENST00000624822 SLC15A2Q16348 729 aa12.57□□□□□ -0.4
LINC01560-202ENST00000624822 FAM9BQ8IZU0 186 aa12.57□□□□□ -0.4
LINC01560-202ENST00000624822 CASZ1Q86V15 1759 aa12.56□□□□□ -0.4
LINC01560-202ENST00000624822 CICQ96RK0 1608 aaPredicted RBP12.56□□□□□ -0.4
LINC01560-202ENST00000624822 HMGB2P26583 209 aaKnown RBP12.56□□□□□ -0.4
LINC01560-202ENST00000624822 ZNF827Q17R98 1081 aa12.56□□□□□ -0.4
LINC01560-202ENST00000624822 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
LINC01560-202ENST00000624822 KCPQ6ZWJ8 1503 aa12.56□□□□□ -0.4
LINC01560-202ENST00000624822 POTEFA5A3E0 1075 aa12.55□□□□□ -0.4
LINC01560-202ENST00000624822 AK7Q96M32 723 aa12.55□□□□□ -0.4
LINC01560-202ENST00000624822 THUMPD2Q9BTF0 503 aaKnown RBP12.55□□□□□ -0.4
LINC01560-202ENST00000624822 TFCP2L1Q9NZI6 479 aa12.55□□□□□ -0.4
LINC01560-202ENST00000624822 MYH14Q7Z406 1995 aaKnown RBP12.54□□□□□ -0.4
LINC01560-202ENST00000624822 SENP3-EIF4A1A0A087X0R7 540 aa12.54□□□□□ -0.4
LINC01560-202ENST00000624822 APAF1O14727 1248 aa12.54□□□□□ -0.4
LINC01560-202ENST00000624822 ITPK1Q13572 414 aa12.54□□□□□ -0.4
LINC01560-202ENST00000624822 ZNF790Q6PG37 636 aa12.54□□□□□ -0.4
LINC01560-202ENST00000624822 LAMB4A4D0S4 1761 aa12.53□□□□□ -0.4
LINC01560-202ENST00000624822 TIE1P35590 1138 aa12.53□□□□□ -0.4
LINC01560-202ENST00000624822 TAF7Q15545 349 aaPredicted RBP12.53□□□□□ -0.4
LINC01560-202ENST00000624822 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
LINC01560-202ENST00000624822 SLC4A9Q96Q91 983 aa12.53□□□□□ -0.4
LINC01560-202ENST00000624822 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
LINC01560-202ENST00000624822 PHF14O94880 888 aa12.52□□□□□ -0.41
LINC01560-202ENST00000624822 FMNL2Q96PY5 1086 aa12.52□□□□□ -0.41
LINC01560-202ENST00000624822 MIS18AQ9NYP9 233 aa12.52□□□□□ -0.41
LINC01560-202ENST00000624822 LAS1LQ9Y4W2 734 aaKnown RBP12.52□□□□□ -0.41
LINC01560-202ENST00000624822 PCDHB13Q9Y5F0 798 aa12.52□□□□□ -0.41
LINC01560-202ENST00000624822 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
LINC01560-202ENST00000624822 TTLL13PA6NNM8 815 aa12.51□□□□□ -0.41
LINC01560-202ENST00000624822 GNPATO15228 680 aa12.51□□□□□ -0.41
LINC01560-202ENST00000624822 KCNQ3O43525 872 aa12.51□□□□□ -0.41
LINC01560-202ENST00000624822 DNAJC10Q8IXB1 793 aa12.51□□□□□ -0.41
LINC01560-202ENST00000624822 ZNF496Q96IT1 587 aaPredicted RBP12.51□□□□□ -0.41
LINC01560-202ENST00000624822 HEG1Q9ULI3 1381 aa12.51□□□□□ -0.41
LINC01560-202ENST00000624822 CCER2I3L3R5 266 aa12.5□□□□□ -0.41
LINC01560-202ENST00000624822 PDGFDQ9GZP0 370 aaPredicted RBP12.5□□□□□ -0.41
LINC01560-202ENST00000624822 TSPYL4Q9UJ04 414 aa12.5□□□□□ -0.41
LINC01560-202ENST00000624822 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
LINC01560-202ENST00000624822 SALL2Q9Y467 1007 aaPredicted RBP12.5□□□□□ -0.41
LINC01560-202ENST00000624822 PNPLA7Q6ZV29 1317 aa12.5□□□□□ -0.41
LINC01560-202ENST00000624822 LRP5O75197 1615 aa12.49□□□□□ -0.41
LINC01560-202ENST00000624822 ZBTB7AO95365 584 aa12.49□□□□□ -0.41
LINC01560-202ENST00000624822 CRKLP46109 303 aaKnown RBP12.49□□□□□ -0.41
LINC01560-202ENST00000624822 VSIG10Q8N0Z9 540 aa12.49□□□□□ -0.41
LINC01560-202ENST00000624822 CNTNAP4Q9C0A0 1308 aa12.48□□□□□ -0.41
LINC01560-202ENST00000624822 SMIM5Q71RC9 77 aa12.48□□□□□ -0.41
LINC01560-202ENST00000624822 FLAD1Q8NFF5 587 aa12.48□□□□□ -0.41
LINC01560-202ENST00000624822 RTCBQ9Y3I0 505 aaKnown RBP12.48□□□□□ -0.41
LINC01560-202ENST00000624822 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.47□□□□□ -0.41
LINC01560-202ENST00000624822 STARD3NLO95772 234 aa12.47□□□□□ -0.41
LINC01560-202ENST00000624822 SSFA2P28290 1259 aa12.47□□□□□ -0.41
LINC01560-202ENST00000624822 CALD1Q05682 793 aaKnown RBP12.47□□□□□ -0.41
LINC01560-202ENST00000624822 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
LINC01560-202ENST00000624822 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
LINC01560-202ENST00000624822 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
LINC01560-202ENST00000624822 TEX13AQ9BXU3 409 aaPredicted RBP12.47□□□□□ -0.41
LINC01560-202ENST00000624822 CCDC87Q9NVE4 849 aa12.47□□□□□ -0.41
LINC01560-202ENST00000624822 SNRPA1P09661 255 aaKnown RBP12.46□□□□□ -0.41
LINC01560-202ENST00000624822 CYP19A1P11511 503 aaPredicted RBP12.46□□□□□ -0.41
LINC01560-202ENST00000624822 TRAPPC3LQ5T215 181 aa12.46□□□□□ -0.41
LINC01560-202ENST00000624822 FAM212AQ96EL1 285 aa12.46□□□□□ -0.41
LINC01560-202ENST00000624822 SPON1Q9HCB6 807 aa12.46□□□□□ -0.41
LINC01560-202ENST00000624822 COLQQ9Y215 455 aaPredicted RBP12.46□□□□□ -0.41
LINC01560-202ENST00000624822 ZNF330Q9Y3S2 320 aaPredicted RBP12.46□□□□□ -0.41
LINC01560-202ENST00000624822 PRAMEF22A3QJZ6 481 aa12.45□□□□□ -0.42
LINC01560-202ENST00000624822 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
LINC01560-202ENST00000624822 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
LINC01560-202ENST00000624822 EIF4A1P60842 406 aaKnown RBP12.45□□□□□ -0.42
LINC01560-202ENST00000624822 NPM2Q86SE8 214 aaKnown RBP12.45□□□□□ -0.42
LINC01560-202ENST00000624822 AMIGO3Q86WK7 504 aa12.45□□□□□ -0.42
LINC01560-202ENST00000624822 MTFR1LQ9H019 292 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms