RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 PES1O00541 588 aaKnown RBP11.02□□□□□ -0.65
USB1-216ENST00000624720 HMGN5P82970 282 aaKnown RBP11.02□□□□□ -0.65
USB1-216ENST00000624720 ZSCAN26Q16670 478 aa11.02□□□□□ -0.65
USB1-216ENST00000624720 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
USB1-216ENST00000624720 DMRT2Q9Y5R5 561 aa11.02□□□□□ -0.65
USB1-216ENST00000624720 ERBB3P21860 1342 aa11.02□□□□□ -0.65
USB1-216ENST00000624720 ALKQ9UM73 1620 aa11.02□□□□□ -0.65
USB1-216ENST00000624720 GTF2F1P35269 517 aaKnown RBP eCLIP11.02□□□□□ -0.65
USB1-216ENST00000624720 GYS2P54840 703 aa11.02□□□□□ -0.65
USB1-216ENST00000624720 CCDC125Q86Z20 511 aa11.02□□□□□ -0.65
USB1-216ENST00000624720 HMOX1P09601 288 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 CD151P48509 253 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 SART3Q15020 963 aaKnown RBP11.01□□□□□ -0.65
USB1-216ENST00000624720 MICALL1Q8N3F8 863 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 CXorf38Q8TB03 319 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 ZCRB1Q8TBF4 217 aaKnown RBP11.01□□□□□ -0.65
USB1-216ENST00000624720 NUDCQ9Y266 331 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 TULP4Q9NRJ4 1543 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 CCDC196A0A1B0GTZ2 297 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 ANKRD33BA6NCL7 494 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 TRAK2O60296 914 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 GOLGA6L1Q8N7Z2 621 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 TSC1Q92574 1164 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 PRIMPOLQ96LW4 560 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 EMILIN1Q9Y6C2 1016 aa11.01□□□□□ -0.65
USB1-216ENST00000624720 TBC1D22AQ8WUA7 517 aa11□□□□□ -0.65
USB1-216ENST00000624720 SKILP12757 684 aa11□□□□□ -0.65
USB1-216ENST00000624720 INHBEP58166 350 aa11□□□□□ -0.65
USB1-216ENST00000624720 FRMD4BQ9Y2L6 1034 aa11□□□□□ -0.65
USB1-216ENST00000624720 PRR36Q9H6K5 1346 aa11□□□□□ -0.65
USB1-216ENST00000624720 POLR1AO95602 1720 aaPredicted RBP10.99□□□□□ -0.65
USB1-216ENST00000624720 EPB41L2O43491 1005 aaKnown RBP10.99□□□□□ -0.65
USB1-216ENST00000624720 HNRNPH2P55795 449 aaKnown RBP10.99□□□□□ -0.65
USB1-216ENST00000624720 NGDNQ8NEJ9 315 aaKnown RBP10.99□□□□□ -0.65
USB1-216ENST00000624720 RANBP17Q9H2T7 1088 aaKnown RBP10.99□□□□□ -0.65
USB1-216ENST00000624720 ECEL1O95672 775 aa10.99□□□□□ -0.65
USB1-216ENST00000624720 NAT1P18440 290 aa10.99□□□□□ -0.65
USB1-216ENST00000624720 ZKSCAN2Q63HK3 967 aa10.99□□□□□ -0.65
USB1-216ENST00000624720 PHF8Q9UPP1 1060 aa10.99□□□□□ -0.65
USB1-216ENST00000624720 MYO3AQ8NEV4 1616 aa10.99□□□□□ -0.65
USB1-216ENST00000624720 ATP2B1P20020 1258 aa10.99□□□□□ -0.65
USB1-216ENST00000624720 MCM5P33992 734 aa10.99□□□□□ -0.65
USB1-216ENST00000624720 NEXNQ0ZGT2 675 aa10.99□□□□□ -0.65
USB1-216ENST00000624720 KRBA2Q6ZNG9 492 aa10.99□□□□□ -0.65
USB1-216ENST00000624720 JARID2Q92833 1246 aaPredicted RBP10.99□□□□□ -0.65
USB1-216ENST00000624720 QRICH2Q9H0J4 1663 aa10.98□□□□□ -0.65
USB1-216ENST00000624720 IFT172Q9UG01 1749 aa10.98□□□□□ -0.65
USB1-216ENST00000624720 NEFHP12036 1026 aa10.98□□□□□ -0.65
USB1-216ENST00000624720 MCM4P33991 863 aa10.98□□□□□ -0.65
USB1-216ENST00000624720 JAKMIP3Q5VZ66 844 aa10.98□□□□□ -0.65
USB1-216ENST00000624720 BCL2L13Q9BXK5 485 aa10.98□□□□□ -0.65
USB1-216ENST00000624720 ZNF232Q9UNY5 417 aa10.98□□□□□ -0.65
USB1-216ENST00000624720 SPATA31D1Q6ZQQ2 1576 aa10.98□□□□□ -0.65
USB1-216ENST00000624720 GOLGA6L22H0YM25 854 aa10.98□□□□□ -0.65
USB1-216ENST00000624720 RMI1Q9H9A7 625 aa10.98□□□□□ -0.65
USB1-216ENST00000624720 LRPPRCP42704 1394 aaKnown RBP10.98□□□□□ -0.65
USB1-216ENST00000624720 ZFYVE9O95405 1425 aa10.98□□□□□ -0.65
USB1-216ENST00000624720 MAP2K2P36507 400 aa10.97□□□□□ -0.65
USB1-216ENST00000624720 STK24Q9Y6E0 443 aa10.97□□□□□ -0.65
USB1-216ENST00000624720 CCDC61Q9Y6R9 512 aa10.97□□□□□ -0.65
USB1-216ENST00000624720 LAMC1P11047 1609 aa10.97□□□□□ -0.65
USB1-216ENST00000624720 KDM5AP29375 1690 aaKnown RBP10.97□□□□□ -0.65
USB1-216ENST00000624720 ANKRD36BQ8N2N9 1353 aa10.96□□□□□ -0.65
USB1-216ENST00000624720 CCP110O43303 1012 aa10.96□□□□□ -0.65
USB1-216ENST00000624720 FAM163BP0C2L3 166 aa10.96□□□□□ -0.65
USB1-216ENST00000624720 ANKLE2Q86XL3 938 aa10.96□□□□□ -0.65
USB1-216ENST00000624720 CFAP53Q96M91 514 aa10.96□□□□□ -0.65
USB1-216ENST00000624720 TEX13AQ9BXU3 409 aaPredicted RBP10.96□□□□□ -0.65
USB1-216ENST00000624720 RBM27Q9P2N5 1060 aaKnown RBP10.96□□□□□ -0.65
USB1-216ENST00000624720 PPIP5K1Q6PFW1 1433 aa10.96□□□□□ -0.66
USB1-216ENST00000624720 TCP11L2Q8N4U5 519 aa10.96□□□□□ -0.66
USB1-216ENST00000624720 LTV1Q96GA3 475 aaPredicted RBP10.96□□□□□ -0.66
USB1-216ENST00000624720 ARPC5LQ9BPX5 153 aa10.96□□□□□ -0.66
USB1-216ENST00000624720 SLKQ9H2G2 1235 aaPredicted RBP10.96□□□□□ -0.66
USB1-216ENST00000624720 GOPCQ9HD26 462 aa10.96□□□□□ -0.66
USB1-216ENST00000624720 RCAN3Q9UKA8 241 aa10.96□□□□□ -0.66
USB1-216ENST00000624720 ACEP12821 1306 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 CHAF1AQ13111 956 aaPredicted RBP10.95□□□□□ -0.66
USB1-216ENST00000624720 TTC19Q6DKK2 380 aaPredicted RBP10.95□□□□□ -0.66
USB1-216ENST00000624720 TRIM74Q86UV6 250 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 TRIM73Q86UV7 250 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 ANKRD20A12PQ8NF67 263 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 ZNF396Q96N95 335 aaPredicted RBP10.95□□□□□ -0.66
USB1-216ENST00000624720 ZKSCAN5Q9Y2L8 839 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 SKAP1Q86WV1 359 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 C10orf67Q8IYJ2 551 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 BCL2L12Q9HB09 334 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 PTPRUQ92729 1446 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 ATAD2Q6PL18 1390 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 SBNO2Q9Y2G9 1366 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 RNF123Q5XPI4 1314 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 SETSIPP0DME0 302 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 NASPP49321 788 aaPredicted RBP10.95□□□□□ -0.66
USB1-216ENST00000624720 THUMPD2Q9BTF0 503 aaKnown RBP10.95□□□□□ -0.66
USB1-216ENST00000624720 ETAA1Q9NY74 926 aa10.95□□□□□ -0.66
USB1-216ENST00000624720 ADAMTS13Q76LX8 1427 aa10.94□□□□□ -0.66
USB1-216ENST00000624720 ANKRD18BA2A2Z9 1011 aa10.94□□□□□ -0.66
USB1-216ENST00000624720 SMARCA5O60264 1052 aaPredicted RBP10.94□□□□□ -0.66
USB1-216ENST00000624720 NOLC1Q14978 699 aaKnown RBP eCLIP10.94□□□□□ -0.66
USB1-216ENST00000624720 DDX17Q92841 729 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms