RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 TEFQ10587 303 aa16.33■□□□□ 0.2
PCDHB17P-202ENST00000623466 CHPF2Q9P2E5 772 aa16.33■□□□□ 0.2
PCDHB17P-202ENST00000623466 CHRNA2Q15822 529 aa16.32■□□□□ 0.2
PCDHB17P-202ENST00000623466 CLEC17AQ6ZS10 378 aa16.32■□□□□ 0.2
PCDHB17P-202ENST00000623466 ANKRD24Q8TF21 1146 aa16.32■□□□□ 0.2
PCDHB17P-202ENST00000623466 ATP10DQ9P241 1426 aa16.32■□□□□ 0.2
PCDHB17P-202ENST00000623466 MARF1Q9Y4F3 1742 aaKnown RBP16.32■□□□□ 0.2
PCDHB17P-202ENST00000623466 MAP7D2Q96T17 732 aa16.32■□□□□ 0.2
PCDHB17P-202ENST00000623466 NUCB2P80303 420 aa16.32■□□□□ 0.2
PCDHB17P-202ENST00000623466 GNAI2P04899 355 aa16.31■□□□□ 0.2
PCDHB17P-202ENST00000623466 GPT2Q8TD30 523 aa16.31■□□□□ 0.2
PCDHB17P-202ENST00000623466 NSFL1CQ9UNZ2 370 aaKnown RBP16.31■□□□□ 0.2
PCDHB17P-202ENST00000623466 BTBD11A6QL63 1104 aa16.31■□□□□ 0.2
PCDHB17P-202ENST00000623466 SLC39A6Q13433 755 aa16.31■□□□□ 0.2
PCDHB17P-202ENST00000623466 ZDHHC9Q9Y397 364 aa16.31■□□□□ 0.2
PCDHB17P-202ENST00000623466 CYP2E1P05181 493 aaPredicted RBP16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 PIP4K2AP48426 406 aaPredicted RBP16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 NOL8Q76FK4 1167 aaKnown RBP16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 ANKARQ7Z5J8 1434 aa16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 PI4KAP2A4QPH2 592 aa16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 MAP4K4O95819 1239 aaPredicted RBP16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 CCT4P50991 539 aaKnown RBP16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 PI4KAP1Q8N8J0 262 aa16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 USP44Q9H0E7 712 aa16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 FOXD4L6Q3SYB3 417 aaPredicted RBP16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 FOXD4L3Q6VB84 417 aaPredicted RBP16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 NLRP2Q9NX02 1062 aa16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 R3HCC1Q9Y3T6 440 aaKnown RBP16.3■□□□□ 0.2
PCDHB17P-202ENST00000623466 NBPF7P0C2Y1 421 aaPredicted RBP16.29■□□□□ 0.2
PCDHB17P-202ENST00000623466 ZNF445P59923 1031 aa16.29■□□□□ 0.2
PCDHB17P-202ENST00000623466 AIMP1Q12904 312 aaKnown RBP16.29■□□□□ 0.2
PCDHB17P-202ENST00000623466 PROSER3Q2NL68 480 aa16.29■□□□□ 0.2
PCDHB17P-202ENST00000623466 ARHGEF25Q86VW2 580 aa16.29■□□□□ 0.2
PCDHB17P-202ENST00000623466 EIF4A1P60842 406 aaKnown RBP16.29■□□□□ 0.2
PCDHB17P-202ENST00000623466 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
PCDHB17P-202ENST00000623466 USP54Q70EL1 1684 aa16.29■□□□□ 0.2
PCDHB17P-202ENST00000623466 SYCE3A1L190 88 aa16.28■□□□□ 0.2
PCDHB17P-202ENST00000623466 RNF214Q8ND24 703 aa16.28■□□□□ 0.2
PCDHB17P-202ENST00000623466 VGLL3A8MV65 326 aa16.28■□□□□ 0.2
PCDHB17P-202ENST00000623466 KCNH5Q8NCM2 988 aa16.28■□□□□ 0.2
PCDHB17P-202ENST00000623466 ST18O60284 1047 aa16.27■□□□□ 0.2
PCDHB17P-202ENST00000623466 OFD1O75665 1012 aa16.27■□□□□ 0.2
PCDHB17P-202ENST00000623466 NUTM1Q86Y26 1132 aa16.27■□□□□ 0.2
PCDHB17P-202ENST00000623466 RILPL2Q969X0 211 aa16.27■□□□□ 0.2
PCDHB17P-202ENST00000623466 TMEM63CQ9P1W3 806 aa16.27■□□□□ 0.2
PCDHB17P-202ENST00000623466 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.2
PCDHB17P-202ENST00000623466 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.2
PCDHB17P-202ENST00000623466 CHD2O14647 1828 aaKnown RBP16.26■□□□□ 0.19
PCDHB17P-202ENST00000623466 HMMRO75330 724 aa16.26■□□□□ 0.19
PCDHB17P-202ENST00000623466 UBTFL1P0CB47 393 aaPredicted RBP16.26■□□□□ 0.19
PCDHB17P-202ENST00000623466 IPO4Q8TEX9 1081 aaKnown RBP16.26■□□□□ 0.19
PCDHB17P-202ENST00000623466 IBTKQ9P2D0 1353 aaPredicted RBP16.26■□□□□ 0.19
PCDHB17P-202ENST00000623466 NWD1Q149M9 1564 aa16.26■□□□□ 0.19
PCDHB17P-202ENST00000623466 TRIM6-TRIM34B2RNG4 842 aa16.26■□□□□ 0.19
PCDHB17P-202ENST00000623466 CSB-PGBD3P0DP91 1061 aa16.26■□□□□ 0.19
PCDHB17P-202ENST00000623466 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
PCDHB17P-202ENST00000623466 NEK4P51957 841 aa16.25■□□□□ 0.19
PCDHB17P-202ENST00000623466 PDE1AP54750 535 aa16.25■□□□□ 0.19
PCDHB17P-202ENST00000623466 TPRNQ4KMQ1 711 aa16.25■□□□□ 0.19
PCDHB17P-202ENST00000623466 CASC1Q6TDU7 716 aa16.25■□□□□ 0.19
PCDHB17P-202ENST00000623466 JARID2Q92833 1246 aaPredicted RBP16.25■□□□□ 0.19
PCDHB17P-202ENST00000623466 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.25■□□□□ 0.19
PCDHB17P-202ENST00000623466 ADGRL3Q9HAR2 1447 aa16.25■□□□□ 0.19
PCDHB17P-202ENST00000623466 SURF6O75683 361 aaKnown RBP16.25■□□□□ 0.19
PCDHB17P-202ENST00000623466 MPNDQ8N594 471 aa16.25■□□□□ 0.19
PCDHB17P-202ENST00000623466 ATF3P18847 181 aa16.24■□□□□ 0.19
PCDHB17P-202ENST00000623466 DMTNQ08495 405 aa16.24■□□□□ 0.19
PCDHB17P-202ENST00000623466 PPP4R3BQ5MIZ7 849 aa16.24■□□□□ 0.19
PCDHB17P-202ENST00000623466 PPP1R42Q7Z4L9 355 aa16.24■□□□□ 0.19
PCDHB17P-202ENST00000623466 UNC5CLQ8IV45 518 aa16.24■□□□□ 0.19
PCDHB17P-202ENST00000623466 STRCQ7RTU9 1775 aa16.24■□□□□ 0.19
PCDHB17P-202ENST00000623466 RNMTO43148 476 aaKnown RBP16.24■□□□□ 0.19
PCDHB17P-202ENST00000623466 CWF19L2Q2TBE0 894 aaKnown RBP16.24■□□□□ 0.19
PCDHB17P-202ENST00000623466 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
PCDHB17P-202ENST00000623466 C19orf44Q9H6X5 657 aa16.23■□□□□ 0.19
PCDHB17P-202ENST00000623466 CWC22Q9HCG8 908 aaKnown RBP16.23■□□□□ 0.19
PCDHB17P-202ENST00000623466 GNAI3P08754 354 aa16.23■□□□□ 0.19
PCDHB17P-202ENST00000623466 ATP8B2P98198 1209 aa16.23■□□□□ 0.19
PCDHB17P-202ENST00000623466 ERC2O15083 957 aa16.22■□□□□ 0.19
PCDHB17P-202ENST00000623466 SRGAP3O43295 1099 aa16.22■□□□□ 0.19
PCDHB17P-202ENST00000623466 MYL6BP14649 208 aa16.22■□□□□ 0.19
PCDHB17P-202ENST00000623466 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
PCDHB17P-202ENST00000623466 LRRCC1Q9C099 1032 aa16.22■□□□□ 0.19
PCDHB17P-202ENST00000623466 SRCIN1Q9C0H9 1055 aa16.22■□□□□ 0.19
PCDHB17P-202ENST00000623466 REC8O95072 547 aa16.22■□□□□ 0.19
PCDHB17P-202ENST00000623466 TMX3Q96JJ7 454 aa16.22■□□□□ 0.19
PCDHB17P-202ENST00000623466 NOL7Q9UMY1 257 aaKnown RBP16.22■□□□□ 0.19
PCDHB17P-202ENST00000623466 UQCRHLA0A096LP55 91 aa16.22■□□□□ 0.19
PCDHB17P-202ENST00000623466 UQCRHP07919 91 aa16.22■□□□□ 0.19
PCDHB17P-202ENST00000623466 GDPD2Q9HCC8 539 aa16.22■□□□□ 0.19
PCDHB17P-202ENST00000623466 KIF24Q5T7B8 1368 aa16.21■□□□□ 0.19
PCDHB17P-202ENST00000623466 NFATC2IPQ8NCF5 419 aa16.21■□□□□ 0.19
PCDHB17P-202ENST00000623466 PDLIM2Q96JY6 352 aa16.21■□□□□ 0.19
PCDHB17P-202ENST00000623466 DNAAF4Q8WXU2 420 aa16.2■□□□□ 0.18
PCDHB17P-202ENST00000623466 PALD1Q9ULE6 856 aa16.2■□□□□ 0.18
PCDHB17P-202ENST00000623466 MAP3K2Q9Y2U5 619 aa16.2■□□□□ 0.18
PCDHB17P-202ENST00000623466 PXDNQ92626 1479 aa16.2■□□□□ 0.18
PCDHB17P-202ENST00000623466 UTP14CQ5TAP6 766 aaKnown RBP16.2■□□□□ 0.18
PCDHB17P-202ENST00000623466 PA2G4Q9UQ80 394 aaKnown RBP16.2■□□□□ 0.18
PCDHB17P-202ENST00000623466 DTNBO60941 627 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms