RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 FAM98CQ17RN3 349 aaKnown RBP18.99■□□□□ 0.63
ATRX-211ENST00000623321 G2E3Q7L622 706 aa18.99■□□□□ 0.63
ATRX-211ENST00000623321 ITPRIPQ8IWB1 547 aa18.99■□□□□ 0.63
ATRX-211ENST00000623321 AFF2P51816 1311 aa18.99■□□□□ 0.63
ATRX-211ENST00000623321 PCDHB15Q9Y5E8 787 aa18.99■□□□□ 0.63
ATRX-211ENST00000623321 SNRPA1P09661 255 aaKnown RBP18.98■□□□□ 0.63
ATRX-211ENST00000623321 PRAMEF22A3QJZ6 481 aa18.97■□□□□ 0.63
ATRX-211ENST00000623321 FLIIQ13045 1269 aa18.97■□□□□ 0.63
ATRX-211ENST00000623321 DBF4Q9UBU7 674 aaPredicted RBP18.97■□□□□ 0.63
ATRX-211ENST00000623321 CHPF2Q9P2E5 772 aa18.97■□□□□ 0.63
ATRX-211ENST00000623321 RGS12O14924 1447 aa18.96■□□□□ 0.63
ATRX-211ENST00000623321 MARCH10Q8NA82 808 aaPredicted RBP18.96■□□□□ 0.63
ATRX-211ENST00000623321 PIGBQ92521 554 aa18.96■□□□□ 0.63
ATRX-211ENST00000623321 RWDD1Q9H446 243 aaPredicted RBP18.96■□□□□ 0.63
ATRX-211ENST00000623321 FBXO41Q8TF61 875 aa18.95■□□□□ 0.62
ATRX-211ENST00000623321 GJD4Q96KN9 370 aaPredicted RBP18.95■□□□□ 0.62
ATRX-211ENST00000623321 CHMP4BQ9H444 224 aaKnown RBP18.95■□□□□ 0.62
ATRX-211ENST00000623321 PAPPAQ13219 1627 aa18.95■□□□□ 0.62
ATRX-211ENST00000623321 FKBP5Q13451 457 aaPredicted RBP18.94■□□□□ 0.62
ATRX-211ENST00000623321 INTS3Q68E01 1043 aaKnown RBP18.94■□□□□ 0.62
ATRX-211ENST00000623321 TRPC5Q9UL62 973 aaPredicted RBP18.94■□□□□ 0.62
ATRX-211ENST00000623321 ITGB4P16144 1822 aa18.94■□□□□ 0.62
ATRX-211ENST00000623321 BCL9O00512 1426 aa18.93■□□□□ 0.62
ATRX-211ENST00000623321 UBR2Q8IWV8 1755 aa18.93■□□□□ 0.62
ATRX-211ENST00000623321 GSE1Q14687 1217 aa18.93■□□□□ 0.62
ATRX-211ENST00000623321 PHAXQ9H814 394 aaKnown RBP18.93■□□□□ 0.62
ATRX-211ENST00000623321 PDZRN3Q9UPQ7 1066 aa18.93■□□□□ 0.62
ATRX-211ENST00000623321 C5P01031 1676 aa18.93■□□□□ 0.62
ATRX-211ENST00000623321 ATRNO75882 1429 aa18.93■□□□□ 0.62
ATRX-211ENST00000623321 KCPQ6ZWJ8 1503 aa18.93■□□□□ 0.62
ATRX-211ENST00000623321 ZBTB7BO15156 539 aaPredicted RBP18.92■□□□□ 0.62
ATRX-211ENST00000623321 PRIM1P49642 420 aaKnown RBP18.92■□□□□ 0.62
ATRX-211ENST00000623321 DDX21Q9NR30 783 aaKnown RBP eCLIP18.92■□□□□ 0.62
ATRX-211ENST00000623321 ZBTB40Q9NUA8 1239 aa18.92■□□□□ 0.62
ATRX-211ENST00000623321 HYPKQ9NX55 129 aa18.92■□□□□ 0.62
ATRX-211ENST00000623321 USP16Q9Y5T5 823 aa18.92■□□□□ 0.62
ATRX-211ENST00000623321 SEC24BO95487 1268 aa18.92■□□□□ 0.62
ATRX-211ENST00000623321 ATG3Q9NT62 314 aa18.92■□□□□ 0.62
ATRX-211ENST00000623321 A0A0G2JS52 829 aa18.91■□□□□ 0.62
ATRX-211ENST00000623321 PTCD1O75127 700 aaKnown RBP18.91■□□□□ 0.62
ATRX-211ENST00000623321 SYTL4Q96C24 671 aaPredicted RBP18.91■□□□□ 0.62
ATRX-211ENST00000623321 ASAP1Q9ULH1 1129 aa18.91■□□□□ 0.62
ATRX-211ENST00000623321 F6X3S4 739 aa18.9■□□□□ 0.62
ATRX-211ENST00000623321 ANXA1P04083 346 aa18.9■□□□□ 0.62
ATRX-211ENST00000623321 BECN1Q14457 450 aa18.9■□□□□ 0.62
ATRX-211ENST00000623321 GLI3P10071 1580 aa18.9■□□□□ 0.62
ATRX-211ENST00000623321 DOT1LQ8TEK3 1739 aa18.9■□□□□ 0.62
ATRX-211ENST00000623321 ONECUT3O60422 494 aaPredicted RBP18.9■□□□□ 0.62
ATRX-211ENST00000623321 CCT4P50991 539 aaKnown RBP18.9■□□□□ 0.62
ATRX-211ENST00000623321 PDIA6Q15084 440 aa18.9■□□□□ 0.62
ATRX-211ENST00000623321 PROSER3Q2NL68 480 aa18.9■□□□□ 0.62
ATRX-211ENST00000623321 THSD7AQ9UPZ6 1657 aa18.89■□□□□ 0.61
ATRX-211ENST00000623321 SLC4A10Q6U841 1118 aa18.89■□□□□ 0.61
ATRX-211ENST00000623321 QTRT2Q9H974 415 aaKnown RBP18.89■□□□□ 0.61
ATRX-211ENST00000623321 VSIG10Q8N0Z9 540 aa18.88■□□□□ 0.61
ATRX-211ENST00000623321 ACSBG1Q96GR2 724 aa18.88■□□□□ 0.61
ATRX-211ENST00000623321 UPF2Q9HAU5 1272 aaKnown RBP18.88■□□□□ 0.61
ATRX-211ENST00000623321 LAMB4A4D0S4 1761 aa18.87■□□□□ 0.61
ATRX-211ENST00000623321 ERBB4Q15303 1308 aa18.87■□□□□ 0.61
ATRX-211ENST00000623321 HDAC1Q13547 482 aaPredicted RBP18.87■□□□□ 0.61
ATRX-211ENST00000623321 TBC1D32Q96NH3 1257 aa18.87■□□□□ 0.61
ATRX-211ENST00000623321 TEX13AQ9BXU3 409 aaPredicted RBP18.87■□□□□ 0.61
ATRX-211ENST00000623321 KAT6BQ8WYB5 2073 aa18.87■□□□□ 0.61
ATRX-211ENST00000623321 PXDNLA1KZ92 1463 aa18.86■□□□□ 0.61
ATRX-211ENST00000623321 PI4KAP2A4QPH2 592 aa18.85■□□□□ 0.61
ATRX-211ENST00000623321 FRAT2O75474 233 aaPredicted RBP18.85■□□□□ 0.61
ATRX-211ENST00000623321 DDX58O95786 925 aaKnown RBP18.85■□□□□ 0.61
ATRX-211ENST00000623321 MYL6BP14649 208 aa18.85■□□□□ 0.61
ATRX-211ENST00000623321 PI4KAP1Q8N8J0 262 aa18.85■□□□□ 0.61
ATRX-211ENST00000623321 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
ATRX-211ENST00000623321 KSR2Q6VAB6 950 aa18.84■□□□□ 0.61
ATRX-211ENST00000623321 DNAAF4Q8WXU2 420 aa18.84■□□□□ 0.61
ATRX-211ENST00000623321 LRP10Q7Z4F1 713 aa18.84■□□□□ 0.61
ATRX-211ENST00000623321 ADCY9O60503 1353 aa18.83■□□□□ 0.61
ATRX-211ENST00000623321 SEPT12Q8IYM1 358 aa18.83■□□□□ 0.6
ATRX-211ENST00000623321 AIMP1Q12904 312 aaKnown RBP18.82■□□□□ 0.6
ATRX-211ENST00000623321 COPS6Q7L5N1 327 aa18.82■□□□□ 0.6
ATRX-211ENST00000623321 NBPF26B4DH59 902 aa18.82■□□□□ 0.6
ATRX-211ENST00000623321 STARD3NLO95772 234 aa18.82■□□□□ 0.6
ATRX-211ENST00000623321 NBPF14Q5TI25 921 aa18.82■□□□□ 0.6
ATRX-211ENST00000623321 ZNF772Q68DY9 489 aaPredicted RBP18.82■□□□□ 0.6
ATRX-211ENST00000623321 NBPF10Q6P3W6 841 aaKnown RBP18.82■□□□□ 0.6
ATRX-211ENST00000623321 DNAJC10Q8IXB1 793 aa18.82■□□□□ 0.6
ATRX-211ENST00000623321 NBPF15Q8N660 670 aa18.82■□□□□ 0.6
ATRX-211ENST00000623321 XAGE3Q8WTP9 111 aa18.82■□□□□ 0.6
ATRX-211ENST00000623321 MAP3K2Q9Y2U5 619 aa18.82■□□□□ 0.6
ATRX-211ENST00000623321 KCNQ2O43526 872 aa18.81■□□□□ 0.6
ATRX-211ENST00000623321 A1BGP04217 495 aa18.81■□□□□ 0.6
ATRX-211ENST00000623321 PIP4K2AP48426 406 aaPredicted RBP18.81■□□□□ 0.6
ATRX-211ENST00000623321 MEIS3Q99687 375 aa18.81■□□□□ 0.6
ATRX-211ENST00000623321 SRCIN1Q9C0H9 1055 aa18.81■□□□□ 0.6
ATRX-211ENST00000623321 N4BP2Q86UW6 1770 aaPredicted RBP18.81■□□□□ 0.6
ATRX-211ENST00000623321 BEND3Q5T5X7 828 aa18.8■□□□□ 0.6
ATRX-211ENST00000623321 SMC5Q8IY18 1101 aa18.8■□□□□ 0.6
ATRX-211ENST00000623321 SMARCC1Q92922 1105 aaPredicted RBP18.8■□□□□ 0.6
ATRX-211ENST00000623321 SLC4A9Q96Q91 983 aa18.8■□□□□ 0.6
ATRX-211ENST00000623321 ATP10DQ9P241 1426 aa18.8■□□□□ 0.6
ATRX-211ENST00000623321 C1orf115Q9H7X2 142 aa18.8■□□□□ 0.6
ATRX-211ENST00000623321 GNAI3P08754 354 aa18.79■□□□□ 0.6
ATRX-211ENST00000623321 ANKRD13DQ6ZTN6 518 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms