RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 CHRNA5P30532 468 aa12.33□□□□□ -0.44
PCDHB9-202ENST00000623266 VSIG10Q8N0Z9 540 aa12.33□□□□□ -0.44
PCDHB9-202ENST00000623266 PIM2Q9P1W9 311 aa12.33□□□□□ -0.44
PCDHB9-202ENST00000623266 ZBTB1Q9Y2K1 713 aa12.33□□□□□ -0.44
PCDHB9-202ENST00000623266 ARFGEF1Q9Y6D6 1849 aa12.32□□□□□ -0.44
PCDHB9-202ENST00000623266 SBF1O95248 1867 aa12.32□□□□□ -0.44
PCDHB9-202ENST00000623266 U2SURPO15042 1029 aaKnown RBP12.32□□□□□ -0.44
PCDHB9-202ENST00000623266 ZPR1O75312 459 aa12.32□□□□□ -0.44
PCDHB9-202ENST00000623266 NFIXQ14938 502 aa12.32□□□□□ -0.44
PCDHB9-202ENST00000623266 MRC1P22897 1456 aa12.32□□□□□ -0.44
PCDHB9-202ENST00000623266 UBR2Q8IWV8 1755 aa12.31□□□□□ -0.44
PCDHB9-202ENST00000623266 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
PCDHB9-202ENST00000623266 KCNQ3O43525 872 aa12.31□□□□□ -0.44
PCDHB9-202ENST00000623266 EIF5P55010 431 aaKnown RBP12.31□□□□□ -0.44
PCDHB9-202ENST00000623266 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
PCDHB9-202ENST00000623266 SIPA1L3O60292 1781 aaPredicted RBP12.3□□□□□ -0.44
PCDHB9-202ENST00000623266 CANXP27824 592 aaKnown RBP12.3□□□□□ -0.44
PCDHB9-202ENST00000623266 ZNF790Q6PG37 636 aa12.3□□□□□ -0.44
PCDHB9-202ENST00000623266 NRXN2Q9P2S2 1712 aa12.29□□□□□ -0.44
PCDHB9-202ENST00000623266 SERPINB2P05120 415 aa12.29□□□□□ -0.44
PCDHB9-202ENST00000623266 HSPA6P17066 643 aa12.29□□□□□ -0.44
PCDHB9-202ENST00000623266 DALRD3Q5D0E6 543 aaKnown RBP12.29□□□□□ -0.44
PCDHB9-202ENST00000623266 C9orf131Q5VYM1 1079 aa12.29□□□□□ -0.44
PCDHB9-202ENST00000623266 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
PCDHB9-202ENST00000623266 CCDC88AQ3V6T2 1871 aa12.28□□□□□ -0.44
PCDHB9-202ENST00000623266 A1BGP04217 495 aa12.28□□□□□ -0.44
PCDHB9-202ENST00000623266 PRELPP51888 382 aa12.28□□□□□ -0.44
PCDHB9-202ENST00000623266 NMRK2Q9NPI5 230 aa12.28□□□□□ -0.44
PCDHB9-202ENST00000623266 COL15A1P39059 1388 aa12.28□□□□□ -0.44
PCDHB9-202ENST00000623266 STARD3NLO95772 234 aa12.27□□□□□ -0.45
PCDHB9-202ENST00000623266 PPP2R1AP30153 589 aa12.27□□□□□ -0.45
PCDHB9-202ENST00000623266 PRKAR2BP31323 418 aa12.27□□□□□ -0.45
PCDHB9-202ENST00000623266 TEFQ10587 303 aa12.27□□□□□ -0.45
PCDHB9-202ENST00000623266 GAS2L2Q8NHY3 880 aa12.27□□□□□ -0.45
PCDHB9-202ENST00000623266 TBC1D2BQ9UPU7 963 aa12.27□□□□□ -0.45
PCDHB9-202ENST00000623266 USP16Q9Y5T5 823 aa12.27□□□□□ -0.45
PCDHB9-202ENST00000623266 CEMIPQ8WUJ3 1361 aa12.27□□□□□ -0.45
PCDHB9-202ENST00000623266 HEG1Q9ULI3 1381 aa12.27□□□□□ -0.45
PCDHB9-202ENST00000623266 TOMM70O94826 608 aa12.26□□□□□ -0.45
PCDHB9-202ENST00000623266 TBC1D9BQ66K14 1250 aa12.26□□□□□ -0.45
PCDHB9-202ENST00000623266 TTC5Q8N0Z6 440 aa12.26□□□□□ -0.45
PCDHB9-202ENST00000623266 TEX13AQ9BXU3 409 aaPredicted RBP12.26□□□□□ -0.45
PCDHB9-202ENST00000623266 PRAMEF22A3QJZ6 481 aa12.25□□□□□ -0.45
PCDHB9-202ENST00000623266 BICDL1Q6ZP65 573 aa12.25□□□□□ -0.45
PCDHB9-202ENST00000623266 DNAJC5GQ8N7S2 189 aa12.25□□□□□ -0.45
PCDHB9-202ENST00000623266 BTBD11A6QL63 1104 aa12.24□□□□□ -0.45
PCDHB9-202ENST00000623266 IL6STP40189 918 aaPredicted RBP12.24□□□□□ -0.45
PCDHB9-202ENST00000623266 DCTN1Q14203 1278 aa12.24□□□□□ -0.45
PCDHB9-202ENST00000623266 CCDC24Q8N4L8 307 aa12.24□□□□□ -0.45
PCDHB9-202ENST00000623266 ANKRD31Q8N7Z5 1873 aa12.24□□□□□ -0.45
PCDHB9-202ENST00000623266 FMNL2Q96PY5 1086 aa12.24□□□□□ -0.45
PCDHB9-202ENST00000623266 RRAGCQ9HB90 399 aa12.24□□□□□ -0.45
PCDHB9-202ENST00000623266 CARMIL3Q8ND23 1372 aa12.23□□□□□ -0.45
PCDHB9-202ENST00000623266 A0A087WZG4 1122 aa12.23□□□□□ -0.45
PCDHB9-202ENST00000623266 CAMTA2O94983 1202 aa12.23□□□□□ -0.45
PCDHB9-202ENST00000623266 PIP4K2AP48426 406 aaPredicted RBP12.23□□□□□ -0.45
PCDHB9-202ENST00000623266 MCM10Q7L590 875 aa12.23□□□□□ -0.45
PCDHB9-202ENST00000623266 C2CD5Q86YS7 1000 aa12.23□□□□□ -0.45
PCDHB9-202ENST00000623266 TTLL6Q8N841 843 aa12.23□□□□□ -0.45
PCDHB9-202ENST00000623266 RNF181Q9P0P0 153 aa12.23□□□□□ -0.45
PCDHB9-202ENST00000623266 DLEC1Q9Y238 1755 aa12.23□□□□□ -0.45
PCDHB9-202ENST00000623266 H0YIN7 160 aa12.22□□□□□ -0.45
PCDHB9-202ENST00000623266 U2AF1L5P0DN76 240 aaPredicted RBP12.22□□□□□ -0.45
PCDHB9-202ENST00000623266 U2AF1Q01081 240 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCDHB9-202ENST00000623266 RASSF7Q02833 373 aa12.22□□□□□ -0.45
PCDHB9-202ENST00000623266 PRR5LQ6MZQ0 368 aa12.22□□□□□ -0.45
PCDHB9-202ENST00000623266 CFAP53Q96M91 514 aa12.22□□□□□ -0.45
PCDHB9-202ENST00000623266 NUDCQ9Y266 331 aa12.22□□□□□ -0.45
PCDHB9-202ENST00000623266 NBPF26B4DH59 902 aa12.21□□□□□ -0.45
PCDHB9-202ENST00000623266 NBPF10Q6P3W6 841 aaKnown RBP12.21□□□□□ -0.45
PCDHB9-202ENST00000623266 NBPF15Q8N660 670 aa12.21□□□□□ -0.45
PCDHB9-202ENST00000623266 BRIP1Q9BX63 1249 aa12.21□□□□□ -0.45
PCDHB9-202ENST00000623266 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.45
PCDHB9-202ENST00000623266 NFKBIEO00221 500 aa12.2□□□□□ -0.46
PCDHB9-202ENST00000623266 ZNF330Q9Y3S2 320 aaPredicted RBP12.2□□□□□ -0.46
PCDHB9-202ENST00000623266 DLG5Q8TDM6 1919 aa12.19□□□□□ -0.46
PCDHB9-202ENST00000623266 POTECB2RU33 542 aa12.19□□□□□ -0.46
PCDHB9-202ENST00000623266 HTATSF1O43719 755 aaKnown RBP12.19□□□□□ -0.46
PCDHB9-202ENST00000623266 LMNB1P20700 586 aa12.19□□□□□ -0.46
PCDHB9-202ENST00000623266 TAF7Q15545 349 aaPredicted RBP12.19□□□□□ -0.46
PCDHB9-202ENST00000623266 RBM46Q8TBY0 533 aaKnown RBP12.19□□□□□ -0.46
PCDHB9-202ENST00000623266 ZNF622Q969S3 477 aaKnown RBP eCLIP12.19□□□□□ -0.46
PCDHB9-202ENST00000623266 SETDB2Q96T68 719 aa12.19□□□□□ -0.46
PCDHB9-202ENST00000623266 SLX4Q8IY92 1834 aa12.18□□□□□ -0.46
PCDHB9-202ENST00000623266 GLTPD2A6NH11 291 aa12.18□□□□□ -0.46
PCDHB9-202ENST00000623266 C21orf2O43822 256 aa12.18□□□□□ -0.46
PCDHB9-202ENST00000623266 SNRPA1P09661 255 aaKnown RBP12.18□□□□□ -0.46
PCDHB9-202ENST00000623266 PDE6BP35913 854 aa12.18□□□□□ -0.46
PCDHB9-202ENST00000623266 APLP1P51693 650 aa12.18□□□□□ -0.46
PCDHB9-202ENST00000623266 HTRA3P83110 453 aa12.18□□□□□ -0.46
PCDHB9-202ENST00000623266 DZIP3Q86Y13 1208 aaKnown RBP12.18□□□□□ -0.46
PCDHB9-202ENST00000623266 PLEKHF1Q96S99 279 aa12.18□□□□□ -0.46
PCDHB9-202ENST00000623266 FER1L6Q2WGJ9 1857 aa12.18□□□□□ -0.46
PCDHB9-202ENST00000623266 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
PCDHB9-202ENST00000623266 SRGNP10124 158 aa12.17□□□□□ -0.46
PCDHB9-202ENST00000623266 CLEC4GQ6UXB4 293 aa12.17□□□□□ -0.46
PCDHB9-202ENST00000623266 RTF1Q92541 710 aaKnown RBP12.17□□□□□ -0.46
PCDHB9-202ENST00000623266 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
PCDHB9-202ENST00000623266 DICER1Q9UPY3 1922 aaKnown RBP12.17□□□□□ -0.46
PCDHB9-202ENST00000623266 HLFQ16534 295 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms