RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 TEX13AQ9BXU3 409 aaPredicted RBP22.75■■□□□ 1.23
PTCHD3-202ENST00000622555 DBF4Q9UBU7 674 aaPredicted RBP22.75■■□□□ 1.23
PTCHD3-202ENST00000622555 TRIM37O94972 964 aa22.74■■□□□ 1.23
PTCHD3-202ENST00000622555 DNAJC10Q8IXB1 793 aa22.74■■□□□ 1.23
PTCHD3-202ENST00000622555 SLC4A9Q96Q91 983 aa22.74■■□□□ 1.23
PTCHD3-202ENST00000622555 LOC102724428A0A0B4J2F2 783 aa22.74■■□□□ 1.23
PTCHD3-202ENST00000622555 SIK1P57059 783 aa22.74■■□□□ 1.23
PTCHD3-202ENST00000622555 ANXA1P04083 346 aa22.73■■□□□ 1.23
PTCHD3-202ENST00000622555 FKBP8Q14318 412 aa22.73■■□□□ 1.23
PTCHD3-202ENST00000622555 C20orf194Q5TEA3 1177 aa22.73■■□□□ 1.23
PTCHD3-202ENST00000622555 ATF7IPQ6VMQ6 1270 aa22.73■■□□□ 1.23
PTCHD3-202ENST00000622555 G2E3Q7L622 706 aa22.73■■□□□ 1.23
PTCHD3-202ENST00000622555 TRIM27P14373 513 aa22.72■■□□□ 1.23
PTCHD3-202ENST00000622555 ARHGAP45Q92619 1136 aa22.72■■□□□ 1.23
PTCHD3-202ENST00000622555 DDX21Q9NR30 783 aaKnown RBP eCLIP22.72■■□□□ 1.23
PTCHD3-202ENST00000622555 CICQ96RK0 1608 aaPredicted RBP22.72■■□□□ 1.23
PTCHD3-202ENST00000622555 ATP6V1AP38606 617 aa22.71■■□□□ 1.23
PTCHD3-202ENST00000622555 PROSER3Q2NL68 480 aa22.71■■□□□ 1.23
PTCHD3-202ENST00000622555 TNNQ9UQP3 1299 aa22.71■■□□□ 1.23
PTCHD3-202ENST00000622555 ZNF831Q5JPB2 1677 aa22.71■■□□□ 1.23
PTCHD3-202ENST00000622555 LY75O60449 1722 aa22.71■■□□□ 1.23
PTCHD3-202ENST00000622555 PTPRCP08575 1304 aa22.71■■□□□ 1.23
PTCHD3-202ENST00000622555 STARD3NLO95772 234 aa22.71■■□□□ 1.23
PTCHD3-202ENST00000622555 FLIIQ13045 1269 aa22.71■■□□□ 1.23
PTCHD3-202ENST00000622555 PDIA6Q15084 440 aa22.71■■□□□ 1.23
PTCHD3-202ENST00000622555 CLUAP1Q96AJ1 413 aa22.71■■□□□ 1.23
PTCHD3-202ENST00000622555 HYPKQ9NX55 129 aa22.71■■□□□ 1.23
PTCHD3-202ENST00000622555 ERBB4Q15303 1308 aa22.7■■□□□ 1.22
PTCHD3-202ENST00000622555 PDE3AQ14432 1141 aa22.7■■□□□ 1.22
PTCHD3-202ENST00000622555 FTSJ3Q8IY81 847 aaKnown RBP22.7■■□□□ 1.22
PTCHD3-202ENST00000622555 API5Q9BZZ5 524 aaKnown RBP22.7■■□□□ 1.22
PTCHD3-202ENST00000622555 PHAXQ9H814 394 aaKnown RBP22.7■■□□□ 1.22
PTCHD3-202ENST00000622555 A1BGP04217 495 aa22.69■■□□□ 1.22
PTCHD3-202ENST00000622555 MS4A1P11836 297 aa22.69■■□□□ 1.22
PTCHD3-202ENST00000622555 MYL6BP14649 208 aa22.69■■□□□ 1.22
PTCHD3-202ENST00000622555 PIP4K2AP48426 406 aaPredicted RBP22.69■■□□□ 1.22
PTCHD3-202ENST00000622555 DZIP1LQ8IYY4 767 aaKnown RBP22.69■■□□□ 1.22
PTCHD3-202ENST00000622555 PANK1Q8TE04 598 aa22.69■■□□□ 1.22
PTCHD3-202ENST00000622555 CYP19A1P11511 503 aaPredicted RBP22.68■■□□□ 1.22
PTCHD3-202ENST00000622555 FKBP5Q13451 457 aaPredicted RBP22.68■■□□□ 1.22
PTCHD3-202ENST00000622555 COL5A3P25940 1745 aaPredicted RBP22.67■■□□□ 1.22
PTCHD3-202ENST00000622555 RLBP1P12271 317 aa22.67■■□□□ 1.22
PTCHD3-202ENST00000622555 ITPK1Q13572 414 aa22.67■■□□□ 1.22
PTCHD3-202ENST00000622555 EP400Q96L91 3159 aa22.66■■□□□ 1.22
PTCHD3-202ENST00000622555 NBPF26B4DH59 902 aa22.66■■□□□ 1.22
PTCHD3-202ENST00000622555 NBPF14Q5TI25 921 aa22.66■■□□□ 1.22
PTCHD3-202ENST00000622555 NBPF10Q6P3W6 841 aaKnown RBP22.66■■□□□ 1.22
PTCHD3-202ENST00000622555 NBPF15Q8N660 670 aa22.66■■□□□ 1.22
PTCHD3-202ENST00000622555 CRBNQ96SW2 442 aa22.65■■□□□ 1.22
PTCHD3-202ENST00000622555 CCNL1Q9UK58 526 aaPredicted RBP22.65■■□□□ 1.22
PTCHD3-202ENST00000622555 TNS1Q9HBL0 1735 aaKnown RBP22.64■■□□□ 1.22
PTCHD3-202ENST00000622555 KCNQ4P56696 695 aa22.64■■□□□ 1.21
PTCHD3-202ENST00000622555 AIMP1Q12904 312 aaKnown RBP22.64■■□□□ 1.21
PTCHD3-202ENST00000622555 TAF1LQ8IZX4 1826 aa22.64■■□□□ 1.21
PTCHD3-202ENST00000622555 LRP10Q7Z4F1 713 aa22.63■■□□□ 1.21
PTCHD3-202ENST00000622555 XAGE3Q8WTP9 111 aa22.63■■□□□ 1.21
PTCHD3-202ENST00000622555 COG6Q9Y2V7 657 aa22.63■■□□□ 1.21
PTCHD3-202ENST00000622555 ABCC4O15439 1325 aa22.63■■□□□ 1.21
PTCHD3-202ENST00000622555 MYH14Q7Z406 1995 aaKnown RBP22.63■■□□□ 1.21
PTCHD3-202ENST00000622555 EXOC6Q8TAG9 804 aa22.62■■□□□ 1.21
PTCHD3-202ENST00000622555 F6X3S4 739 aa22.62■■□□□ 1.21
PTCHD3-202ENST00000622555 CRKLP46109 303 aaKnown RBP22.62■■□□□ 1.21
PTCHD3-202ENST00000622555 COPS6Q7L5N1 327 aa22.62■■□□□ 1.21
PTCHD3-202ENST00000622555 TMEM57Q8N5G2 664 aa22.62■■□□□ 1.21
PTCHD3-202ENST00000622555 RREB1Q92766 1687 aa22.62■■□□□ 1.21
PTCHD3-202ENST00000622555 CCDC87Q9NVE4 849 aa22.62■■□□□ 1.21
PTCHD3-202ENST00000622555 DDX58O95786 925 aaKnown RBP22.61■■□□□ 1.21
PTCHD3-202ENST00000622555 APBA3O96018 575 aa22.61■■□□□ 1.21
PTCHD3-202ENST00000622555 LINC00116Q8NCU8 138 aa22.61■■□□□ 1.21
PTCHD3-202ENST00000622555 ZBTB1Q9Y2K1 713 aa22.61■■□□□ 1.21
PTCHD3-202ENST00000622555 ZNF330Q9Y3S2 320 aaPredicted RBP22.61■■□□□ 1.21
PTCHD3-202ENST00000622555 ITPRIPQ8IWB1 547 aa22.6■■□□□ 1.21
PTCHD3-202ENST00000622555 PI4KAP2A4QPH2 592 aa22.6■■□□□ 1.21
PTCHD3-202ENST00000622555 MVPQ14764 893 aaKnown RBP22.6■■□□□ 1.21
PTCHD3-202ENST00000622555 INTS5Q6P9B9 1019 aaKnown RBP22.6■■□□□ 1.21
PTCHD3-202ENST00000622555 SLC4A10Q6U841 1118 aa22.6■■□□□ 1.21
PTCHD3-202ENST00000622555 PI4KAP1Q8N8J0 262 aa22.6■■□□□ 1.21
PTCHD3-202ENST00000622555 N4BP2Q86UW6 1770 aaPredicted RBP22.59■■□□□ 1.21
PTCHD3-202ENST00000622555 ADCY9O60503 1353 aa22.58■■□□□ 1.21
PTCHD3-202ENST00000622555 ERICH6BQ5W0A0 696 aa22.58■■□□□ 1.21
PTCHD3-202ENST00000622555 KSR2Q6VAB6 950 aa22.58■■□□□ 1.21
PTCHD3-202ENST00000622555 SLC27A3Q5K4L6 730 aa22.57■■□□□ 1.2
PTCHD3-202ENST00000622555 DNAAF4Q8WXU2 420 aa22.57■■□□□ 1.2
PTCHD3-202ENST00000622555 MAP3K2Q9Y2U5 619 aa22.57■■□□□ 1.2
PTCHD3-202ENST00000622555 ARFGEF2Q9Y6D5 1785 aa22.57■■□□□ 1.2
PTCHD3-202ENST00000622555 CNTNAP4Q9C0A0 1308 aa22.57■■□□□ 1.2
PTCHD3-202ENST00000622555 PXDNLA1KZ92 1463 aa22.57■■□□□ 1.2
PTCHD3-202ENST00000622555 PLSCR1O15162 318 aa22.57■■□□□ 1.2
PTCHD3-202ENST00000622555 RIC3Q7Z5B4 369 aa22.57■■□□□ 1.2
PTCHD3-202ENST00000622555 IL6STP40189 918 aaPredicted RBP22.56■■□□□ 1.2
PTCHD3-202ENST00000622555 INTS3Q68E01 1043 aaKnown RBP22.56■■□□□ 1.2
PTCHD3-202ENST00000622555 TTLL7Q6ZT98 887 aa22.56■■□□□ 1.2
PTCHD3-202ENST00000622555 ANKRD13DQ6ZTN6 518 aa22.56■■□□□ 1.2
PTCHD3-202ENST00000622555 NPM2Q86SE8 214 aaKnown RBP22.56■■□□□ 1.2
PTCHD3-202ENST00000622555 LRRC4BQ9NT99 713 aa22.56■■□□□ 1.2
PTCHD3-202ENST00000622555 C4BP0C0L5 1744 aa22.56■■□□□ 1.2
PTCHD3-202ENST00000622555 RGPD3A6NKT7 1758 aaPredicted RBP22.55■■□□□ 1.2
PTCHD3-202ENST00000622555 RGPD4Q7Z3J3 1758 aa22.55■■□□□ 1.2
PTCHD3-202ENST00000622555 NUP188Q5SRE5 1749 aa22.55■■□□□ 1.2
PTCHD3-202ENST00000622555 DDX19BQ9UMR2 479 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms