RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SLFNL1Q499Z3 407 aa9.4□□□□□ -0.9
VPS11-209ENST00000622309 MNS1Q8NEH6 495 aa9.4□□□□□ -0.9
VPS11-209ENST00000622309 ERO1AQ96HE7 468 aa9.4□□□□□ -0.9
VPS11-209ENST00000622309 DONSONQ9NYP3 566 aa9.4□□□□□ -0.9
VPS11-209ENST00000622309 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.4□□□□□ -0.9
VPS11-209ENST00000622309 PLXNC1O60486 1568 aa9.4□□□□□ -0.9
VPS11-209ENST00000622309 NCKAP5LQ9HCH0 1330 aa9.4□□□□□ -0.9
VPS11-209ENST00000622309 GOLIM4O00461 696 aa9.4□□□□□ -0.9
VPS11-209ENST00000622309 NUTM2GQ5VZR2 741 aa9.4□□□□□ -0.9
VPS11-209ENST00000622309 LCMT1Q9UIC8 334 aa9.4□□□□□ -0.9
VPS11-209ENST00000622309 ANKRD45Q5TZF3 282 aa9.4□□□□□ -0.91
VPS11-209ENST00000622309 TESK2Q96S53 571 aa9.4□□□□□ -0.91
VPS11-209ENST00000622309 CXorf56Q9H5V9 222 aa9.4□□□□□ -0.91
VPS11-209ENST00000622309 RRP15Q9Y3B9 282 aaKnown RBP9.4□□□□□ -0.91
VPS11-209ENST00000622309 KANK1Q14678 1352 aa9.4□□□□□ -0.91
VPS11-209ENST00000622309 CFAP65Q6ZU64 1925 aaKnown RBP9.39□□□□□ -0.91
VPS11-209ENST00000622309 CFAP70Q5T0N1 1121 aa9.39□□□□□ -0.91
VPS11-209ENST00000622309 DNAJC14Q6Y2X3 702 aaPredicted RBP9.39□□□□□ -0.91
VPS11-209ENST00000622309 IQGAP3Q86VI3 1631 aa9.39□□□□□ -0.91
VPS11-209ENST00000622309 ZNF142P52746 1687 aaPredicted RBP9.39□□□□□ -0.91
VPS11-209ENST00000622309 ATP2B1P20020 1258 aa9.39□□□□□ -0.91
VPS11-209ENST00000622309 SRLQ86TD4 932 aa9.39□□□□□ -0.91
VPS11-209ENST00000622309 KIF1CO43896 1103 aaKnown RBP9.38□□□□□ -0.91
VPS11-209ENST00000622309 AK7Q96M32 723 aa9.38□□□□□ -0.91
VPS11-209ENST00000622309 GDPD2Q9HCC8 539 aa9.38□□□□□ -0.91
VPS11-209ENST00000622309 CPS1P31327 1500 aa9.38□□□□□ -0.91
VPS11-209ENST00000622309 SMARCA5O60264 1052 aaPredicted RBP9.38□□□□□ -0.91
VPS11-209ENST00000622309 CCDC186Q7Z3E2 898 aa9.38□□□□□ -0.91
VPS11-209ENST00000622309 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.38□□□□□ -0.91
VPS11-209ENST00000622309 UGGT1Q9NYU2 1555 aa9.38□□□□□ -0.91
VPS11-209ENST00000622309 GADD45BO75293 160 aaPredicted RBP9.38□□□□□ -0.91
VPS11-209ENST00000622309 MX1P20591 662 aa9.38□□□□□ -0.91
VPS11-209ENST00000622309 SUFUQ9UMX1 484 aa9.38□□□□□ -0.91
VPS11-209ENST00000622309 ATP7AQ04656 1500 aa9.37□□□□□ -0.91
VPS11-209ENST00000622309 E2F4Q16254 413 aa9.37□□□□□ -0.91
VPS11-209ENST00000622309 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
VPS11-209ENST00000622309 RRP7AQ9Y3A4 280 aaKnown RBP9.37□□□□□ -0.91
VPS11-209ENST00000622309 TRPM1Q7Z4N2 1603 aa9.37□□□□□ -0.91
VPS11-209ENST00000622309 SLU7O95391 586 aaKnown RBP9.37□□□□□ -0.91
VPS11-209ENST00000622309 HSPA1LP34931 641 aa9.37□□□□□ -0.91
VPS11-209ENST00000622309 HSP90AB4PQ58FF6 505 aa9.37□□□□□ -0.91
VPS11-209ENST00000622309 USP48Q86UV5 1035 aa9.37□□□□□ -0.91
VPS11-209ENST00000622309 GPRASP1Q5JY77 1395 aa9.37□□□□□ -0.91
VPS11-209ENST00000622309 PTPN14Q15678 1187 aa9.37□□□□□ -0.91
VPS11-209ENST00000622309 GOLGA5Q8TBA6 731 aa9.37□□□□□ -0.91
VPS11-209ENST00000622309 EVI5LQ96CN4 794 aa9.37□□□□□ -0.91
VPS11-209ENST00000622309 ARGLU1Q9NWB6 273 aaPredicted RBP9.37□□□□□ -0.91
VPS11-209ENST00000622309 CEP170BQ9Y4F5 1589 aaPredicted RBP9.36□□□□□ -0.91
VPS11-209ENST00000622309 PIK3C2GO75747 1445 aa9.36□□□□□ -0.91
VPS11-209ENST00000622309 PNMA6AP0CW24 399 aaPredicted RBP9.36□□□□□ -0.91
VPS11-209ENST00000622309 LRMPQ12912 555 aa9.36□□□□□ -0.91
VPS11-209ENST00000622309 FBXO18Q8NFZ0 1043 aa9.36□□□□□ -0.91
VPS11-209ENST00000622309 RNF217Q8TC41 542 aa9.36□□□□□ -0.91
VPS11-209ENST00000622309 SMARCE1Q969G3 411 aa9.36□□□□□ -0.91
VPS11-209ENST00000622309 ADGRF5Q8IZF2 1346 aa9.36□□□□□ -0.91
VPS11-209ENST00000622309 MYO3AQ8NEV4 1616 aa9.36□□□□□ -0.91
VPS11-209ENST00000622309 ATP6V1AP38606 617 aa9.36□□□□□ -0.91
VPS11-209ENST00000622309 MAGEA9P43362 315 aa9.36□□□□□ -0.91
VPS11-209ENST00000622309 FHOD1Q9Y613 1164 aa9.36□□□□□ -0.91
VPS11-209ENST00000622309 RAD50Q92878 1312 aa9.36□□□□□ -0.91
VPS11-209ENST00000622309 KIDINS220Q9ULH0 1771 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 TMCO3Q6UWJ1 677 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 EXOC8Q8IYI6 725 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 ANKRD20A12PQ8NF67 263 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 MAP2K2P36507 400 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 PLA2G4AP47712 749 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 ST5P78524 1137 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 MED4Q9NPJ6 270 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 ATG3Q9NT62 314 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 PTPRCP08575 1304 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 AP5Z1O43299 807 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 ZNF853P0CG23 659 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 NBPF20Q3BBV1 942 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 DNAJC21Q5F1R6 531 aaKnown RBP9.35□□□□□ -0.91
VPS11-209ENST00000622309 LEKR1Q6ZMV7 388 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
VPS11-209ENST00000622309 CCDC171Q6TFL3 1326 aa9.34□□□□□ -0.91
VPS11-209ENST00000622309 CALRP27797 417 aaKnown RBP9.34□□□□□ -0.91
VPS11-209ENST00000622309 PIP4K2BP78356 416 aa9.34□□□□□ -0.91
VPS11-209ENST00000622309 GIMAP6Q6P9H5 292 aa9.34□□□□□ -0.91
VPS11-209ENST00000622309 WDR63Q8IWG1 891 aa9.34□□□□□ -0.91
VPS11-209ENST00000622309 TRAK1Q9UPV9 953 aa9.34□□□□□ -0.91
VPS11-209ENST00000622309 TRIM27P14373 513 aa9.34□□□□□ -0.91
VPS11-209ENST00000622309 TMEM132EQ6IEE7 984 aa9.34□□□□□ -0.91
VPS11-209ENST00000622309 CASC1Q6TDU7 716 aa9.34□□□□□ -0.91
VPS11-209ENST00000622309 ATL2Q8NHH9 583 aa9.34□□□□□ -0.91
VPS11-209ENST00000622309 PPM1EQ8WY54 764 aa9.34□□□□□ -0.91
VPS11-209ENST00000622309 USP26Q9BXU7 913 aa9.34□□□□□ -0.91
VPS11-209ENST00000622309 LMAN1P49257 510 aa9.33□□□□□ -0.92
VPS11-209ENST00000622309 CLCN6P51797 869 aa9.33□□□□□ -0.92
VPS11-209ENST00000622309 MCTP2Q6DN12 878 aa9.33□□□□□ -0.92
VPS11-209ENST00000622309 ZSCAN25Q6NSZ9 544 aa9.33□□□□□ -0.92
VPS11-209ENST00000622309 A2ML1A8K2U0 1454 aa9.33□□□□□ -0.92
VPS11-209ENST00000622309 IVLP07476 585 aa9.33□□□□□ -0.92
VPS11-209ENST00000622309 CCDC192P0DO97 292 aa9.33□□□□□ -0.92
VPS11-209ENST00000622309 MAP2K1Q02750 393 aaPredicted RBP9.33□□□□□ -0.92
VPS11-209ENST00000622309 SAFB2Q14151 953 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS11-209ENST00000622309 LRCH2Q5VUJ6 765 aa9.33□□□□□ -0.92
VPS11-209ENST00000622309 FAM212AQ96EL1 285 aa9.33□□□□□ -0.92
VPS11-209ENST00000622309 TRIM5Q9C035 493 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms