RNA–Protein interactions for RNA: ENST00000622120.1

LINC00963-213, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 355 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-213ENST00000622120 KIF13BQ9NQT8 1826 aa16.54■□□□□ 0.24
LINC00963-213ENST00000622120 COL15A1P39059 1388 aa16.54■□□□□ 0.24
LINC00963-213ENST00000622120 YBX3P16989 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC00963-213ENST00000622120 CANXP27824 592 aaKnown RBP16.54■□□□□ 0.24
LINC00963-213ENST00000622120 MYBBP1AQ9BQG0 1328 aaKnown RBP16.53■□□□□ 0.24
LINC00963-213ENST00000622120 MAPK8IP3Q9UPT6 1336 aa16.53■□□□□ 0.24
LINC00963-213ENST00000622120 DCTN1Q14203 1278 aa16.53■□□□□ 0.24
LINC00963-213ENST00000622120 FKBP8Q14318 412 aa16.53■□□□□ 0.24
LINC00963-213ENST00000622120 USPL1Q5W0Q7 1092 aa16.53■□□□□ 0.24
LINC00963-213ENST00000622120 KCNQ3O43525 872 aa16.52■□□□□ 0.24
LINC00963-213ENST00000622120 PLEKHF1Q96S99 279 aa16.52■□□□□ 0.24
LINC00963-213ENST00000622120 NARFQ9UHQ1 456 aa16.52■□□□□ 0.24
LINC00963-213ENST00000622120 N4BP2Q86UW6 1770 aaPredicted RBP16.51■□□□□ 0.23
LINC00963-213ENST00000622120 A0A087WZG4 1122 aa16.51■□□□□ 0.23
LINC00963-213ENST00000622120 TGFB2P61812 414 aa16.51■□□□□ 0.23
LINC00963-213ENST00000622120 NFE2L2Q16236 605 aa16.51■□□□□ 0.23
LINC00963-213ENST00000622120 C10orf71Q711Q0 1435 aa16.51■□□□□ 0.23
LINC00963-213ENST00000622120 TAF7Q15545 349 aaPredicted RBP16.5■□□□□ 0.23
LINC00963-213ENST00000622120 NPM2Q86SE8 214 aaKnown RBP16.5■□□□□ 0.23
LINC00963-213ENST00000622120 WWC3Q9ULE0 1092 aa16.5■□□□□ 0.23
LINC00963-213ENST00000622120 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
LINC00963-213ENST00000622120 EIF5P55010 431 aaKnown RBP16.49■□□□□ 0.23
LINC00963-213ENST00000622120 PXDNLA1KZ92 1463 aa16.48■□□□□ 0.23
LINC00963-213ENST00000622120 SNRPA1P09661 255 aaKnown RBP16.48■□□□□ 0.23
LINC00963-213ENST00000622120 TM4SF1P30408 202 aa16.48■□□□□ 0.23
LINC00963-213ENST00000622120 DDR1Q08345 913 aa16.48■□□□□ 0.23
LINC00963-213ENST00000622120 ZNF784Q8NCA9 323 aaPredicted RBP16.48■□□□□ 0.23
LINC00963-213ENST00000622120 KIAA1551Q9HCM1 1747 aa16.48■□□□□ 0.23
LINC00963-213ENST00000622120 A0A0G2JLW4 131 aa16.47■□□□□ 0.23
LINC00963-213ENST00000622120 POLRMTO00411 1230 aaKnown RBP16.47■□□□□ 0.23
LINC00963-213ENST00000622120 A1BGP04217 495 aa16.47■□□□□ 0.23
LINC00963-213ENST00000622120 IL6STP40189 918 aaPredicted RBP16.47■□□□□ 0.23
LINC00963-213ENST00000622120 PNISRQ8TF01 805 aaKnown RBP16.47■□□□□ 0.23
LINC00963-213ENST00000622120 AFDNP55196 1824 aaKnown RBP16.47■□□□□ 0.23
LINC00963-213ENST00000622120 DPEP1P16444 411 aa16.46■□□□□ 0.23
LINC00963-213ENST00000622120 NFIXQ14938 502 aa16.46■□□□□ 0.23
LINC00963-213ENST00000622120 WDR43Q15061 677 aaKnown RBP eCLIP16.46■□□□□ 0.23
LINC00963-213ENST00000622120 USP16Q9Y5T5 823 aa16.46■□□□□ 0.23
LINC00963-213ENST00000622120 PRKRIP1Q9H875 184 aaPredicted RBP16.45■□□□□ 0.22
LINC00963-213ENST00000622120 BCL2L12Q9HB09 334 aa16.45■□□□□ 0.22
LINC00963-213ENST00000622120 MIS18AQ9NYP9 233 aa16.45■□□□□ 0.22
LINC00963-213ENST00000622120 TBC1D2BQ9UPU7 963 aa16.45■□□□□ 0.22
LINC00963-213ENST00000622120 UTRNP46939 3433 aa16.45■□□□□ 0.22
LINC00963-213ENST00000622120 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
LINC00963-213ENST00000622120 SCN7AQ01118 1682 aa16.44■□□□□ 0.22
LINC00963-213ENST00000622120 GOLGB1Q14789 3259 aaKnown RBP16.44■□□□□ 0.22
LINC00963-213ENST00000622120 PRAMEF22A3QJZ6 481 aa16.44■□□□□ 0.22
LINC00963-213ENST00000622120 RIPK4P57078 832 aa16.44■□□□□ 0.22
LINC00963-213ENST00000622120 BCS1LQ9Y276 419 aa16.44■□□□□ 0.22
LINC00963-213ENST00000622120 BRCA1P38398 1863 aaKnown RBP16.44■□□□□ 0.22
LINC00963-213ENST00000622120 SERPINB2P05120 415 aa16.43■□□□□ 0.22
LINC00963-213ENST00000622120 BICDL1Q6ZP65 573 aa16.43■□□□□ 0.22
LINC00963-213ENST00000622120 THUMPD2Q9BTF0 503 aaKnown RBP16.43■□□□□ 0.22
LINC00963-213ENST00000622120 NRXN2Q9P2S2 1712 aa16.42■□□□□ 0.22
LINC00963-213ENST00000622120 LAMB4A4D0S4 1761 aa16.42■□□□□ 0.22
LINC00963-213ENST00000622120 LMOD3Q0VAK6 560 aa16.42■□□□□ 0.22
LINC00963-213ENST00000622120 DZIP3Q86Y13 1208 aaKnown RBP16.42■□□□□ 0.22
LINC00963-213ENST00000622120 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
LINC00963-213ENST00000622120 ARFGEF1Q9Y6D6 1849 aa16.41■□□□□ 0.22
LINC00963-213ENST00000622120 TMPOP42166 694 aaKnown RBP16.41■□□□□ 0.22
LINC00963-213ENST00000622120 PIP4K2AP48426 406 aaPredicted RBP16.41■□□□□ 0.22
LINC00963-213ENST00000622120 CCDC146Q8IYE0 955 aa16.41■□□□□ 0.22
LINC00963-213ENST00000622120 BCORQ6W2J9 1755 aa16.41■□□□□ 0.22
LINC00963-213ENST00000622120 CAMTA2O94983 1202 aa16.4■□□□□ 0.22
LINC00963-213ENST00000622120 KCNA3P22001 575 aa16.4■□□□□ 0.22
LINC00963-213ENST00000622120 TBC1D9BQ66K14 1250 aa16.4■□□□□ 0.22
LINC00963-213ENST00000622120 RUNDC1Q96C34 613 aa16.4■□□□□ 0.22
LINC00963-213ENST00000622120 CHRNA5P30532 468 aa16.39■□□□□ 0.21
LINC00963-213ENST00000622120 EIF4A1P60842 406 aaKnown RBP16.39■□□□□ 0.21
LINC00963-213ENST00000622120 NEUROD2Q15784 382 aa16.39■□□□□ 0.21
LINC00963-213ENST00000622120 DALRD3Q5D0E6 543 aaKnown RBP16.39■□□□□ 0.21
LINC00963-213ENST00000622120 TSPYL4Q9UJ04 414 aa16.39■□□□□ 0.21
LINC00963-213ENST00000622120 RRP7AQ9Y3A4 280 aaKnown RBP16.39■□□□□ 0.21
LINC00963-213ENST00000622120 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
LINC00963-213ENST00000622120 NPHP1O15259 732 aa16.38■□□□□ 0.21
LINC00963-213ENST00000622120 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
LINC00963-213ENST00000622120 ARHGAP27Q6ZUM4 889 aa16.38■□□□□ 0.21
LINC00963-213ENST00000622120 SETDB2Q96T68 719 aa16.38■□□□□ 0.21
LINC00963-213ENST00000622120 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
LINC00963-213ENST00000622120 ZNF652Q9Y2D9 606 aa16.38■□□□□ 0.21
LINC00963-213ENST00000622120 NBPF26B4DH59 902 aa16.37■□□□□ 0.21
LINC00963-213ENST00000622120 NBPF10Q6P3W6 841 aaKnown RBP16.37■□□□□ 0.21
LINC00963-213ENST00000622120 NBPF15Q8N660 670 aa16.37■□□□□ 0.21
LINC00963-213ENST00000622120 CLEC4GQ6UXB4 293 aa16.36■□□□□ 0.21
LINC00963-213ENST00000622120 BABAM1Q9NWV8 329 aa16.36■□□□□ 0.21
LINC00963-213ENST00000622120 DLEC1Q9Y238 1755 aa16.36■□□□□ 0.21
LINC00963-213ENST00000622120 ATP10DQ9P241 1426 aa16.36■□□□□ 0.21
LINC00963-213ENST00000622120 ZNF316A6NFI3 1004 aaPredicted RBP16.35■□□□□ 0.21
LINC00963-213ENST00000622120 H0YIN7 160 aa16.35■□□□□ 0.21
LINC00963-213ENST00000622120 C2CD5Q86YS7 1000 aa16.35■□□□□ 0.21
LINC00963-213ENST00000622120 ANKRD31Q8N7Z5 1873 aa16.34■□□□□ 0.21
LINC00963-213ENST00000622120 PDE6BP35913 854 aa16.34■□□□□ 0.21
LINC00963-213ENST00000622120 PRR5LQ6MZQ0 368 aa16.34■□□□□ 0.21
LINC00963-213ENST00000622120 NGEFQ8N5V2 710 aa16.34■□□□□ 0.21
LINC00963-213ENST00000622120 CNBD1Q8NA66 436 aa16.34■□□□□ 0.21
LINC00963-213ENST00000622120 ADCY9O60503 1353 aa16.34■□□□□ 0.21
LINC00963-213ENST00000622120 RGL2O15211 777 aa16.33■□□□□ 0.2
LINC00963-213ENST00000622120 ST5P78524 1137 aa16.33■□□□□ 0.2
LINC00963-213ENST00000622120 BRIP1Q9BX63 1249 aa16.33■□□□□ 0.2
LINC00963-213ENST00000622120 PDZRN3Q9UPQ7 1066 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms