RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 SYTL4Q96C24 671 aaPredicted RBP13.39□□□□□ -0.27
CLTC-215ENST00000621829 NOL3O60936 208 aaKnown RBP13.38□□□□□ -0.27
CLTC-215ENST00000621829 CEP131Q9UPN4 1083 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 TWISTNBQ3B726 338 aaPredicted RBP13.38□□□□□ -0.27
CLTC-215ENST00000621829 CCDC30Q5VVM6 783 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 CPLX4Q7Z7G2 160 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 FSIP1Q8NA03 581 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 FEZ1Q99689 392 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 PCK1P35558 622 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 CCDC57Q2TAC2 916 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 PPP1R14CQ8TAE6 165 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 PPP1R12CQ9BZL4 782 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 MAP2K2P36507 400 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 CNNM3Q8NE01 707 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 FEZ2Q9UHY8 353 aaPredicted RBP13.38□□□□□ -0.27
CLTC-215ENST00000621829 KLHL40Q2TBA0 621 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 SEPT14Q6ZU15 432 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 CCDC186Q7Z3E2 898 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 CEP120Q8N960 986 aa13.38□□□□□ -0.27
CLTC-215ENST00000621829 CTAGE15A4D2H0 777 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 CTAGE8P0CG41 777 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 NBPF8Q3BBV2 869 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 CTAGE6Q86UF2 777 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 CTAGE4Q8IX94 777 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 RBM28Q9NW13 759 aaKnown RBP13.37□□□□□ -0.27
CLTC-215ENST00000621829 GOLIM4O00461 696 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 ANO6Q4KMQ2 910 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 MTHFSP49914 203 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 FAM184BQ9ULE4 1060 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 ATF7IPQ6VMQ6 1270 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 CWC25Q9NXE8 425 aaPredicted RBP13.37□□□□□ -0.27
CLTC-215ENST00000621829 RHOXF2BP0C7M4 288 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 CCDC184Q52MB2 194 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 VPS36Q86VN1 386 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 RHOXF2Q9BQY4 288 aa13.37□□□□□ -0.27
CLTC-215ENST00000621829 PUF60Q9UHX1 559 aaKnown RBP13.37□□□□□ -0.27
CLTC-215ENST00000621829 ZBTB16Q05516 673 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 CKAP4Q07065 602 aaKnown RBP13.36□□□□□ -0.27
CLTC-215ENST00000621829 AACSQ86V21 672 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 SRCIN1Q9C0H9 1055 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 RABEP2Q9H5N1 569 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 CTAGE9A4FU28 777 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 SMIM23A6NLE4 172 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 FKBP4Q02790 459 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLTC-215ENST00000621829 HSP90AA4PQ58FG1 418 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 UBAC1Q9BSL1 405 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 ATP11AP98196 1134 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 CAPZA3Q96KX2 299 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 UBE2HP62256 183 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 TERF1P54274 439 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 CCDC158Q5M9N0 1113 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 CFAP58Q5T655 872 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 MYCBPQ99417 103 aaPredicted RBP13.36□□□□□ -0.27
CLTC-215ENST00000621829 IL1RAPL2Q9NP60 686 aa13.36□□□□□ -0.27
CLTC-215ENST00000621829 MYO1BO43795 1136 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 SMARCA5O60264 1052 aaPredicted RBP13.35□□□□□ -0.27
CLTC-215ENST00000621829 ZWINTO95229 277 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 DESP17661 470 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 EVA1CP58658 441 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 VGFO15240 615 aaPredicted RBP13.35□□□□□ -0.27
CLTC-215ENST00000621829 PRIM1P49642 420 aaKnown RBP13.35□□□□□ -0.27
CLTC-215ENST00000621829 UBASH3AP57075 661 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 FAM76AQ8TAV0 307 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 DDX19AQ9NUU7 478 aaKnown RBP13.35□□□□□ -0.27
CLTC-215ENST00000621829 C20orf194Q5TEA3 1177 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 CCDC129Q6ZRS4 1044 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.274e-7■■□□□ 14.5
CLTC-215ENST00000621829 RFC1P35251 1148 aaPredicted RBP13.35□□□□□ -0.27
CLTC-215ENST00000621829 TMEM57Q8N5G2 664 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 PSMD1Q99460 953 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 CTNNA2P26232 953 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 PPP2R1AP30153 589 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 DIXDC1Q155Q3 683 aa13.35□□□□□ -0.27
CLTC-215ENST00000621829 POTEJP0CG39 1038 aa13.34□□□□□ -0.27
CLTC-215ENST00000621829 LACTBP83111 547 aaPredicted RBP13.34□□□□□ -0.27
CLTC-215ENST00000621829 TSG101Q99816 390 aa13.34□□□□□ -0.27
CLTC-215ENST00000621829 GGNBP2Q9H3C7 697 aa13.34□□□□□ -0.27
CLTC-215ENST00000621829 RPAINQ86UA6 219 aa13.34□□□□□ -0.27
CLTC-215ENST00000621829 PLEKHH1Q9ULM0 1364 aa13.34□□□□□ -0.27
CLTC-215ENST00000621829 GCKP35557 465 aa13.34□□□□□ -0.27
CLTC-215ENST00000621829 FERP16591 822 aa13.34□□□□□ -0.27
CLTC-215ENST00000621829 DZIP1Q86YF9 867 aaKnown RBP13.34□□□□□ -0.27
CLTC-215ENST00000621829 PRPF40BQ6NWY9 871 aaKnown RBP13.34□□□□□ -0.27
CLTC-215ENST00000621829 NUTM1Q86Y26 1132 aa13.34□□□□□ -0.27
CLTC-215ENST00000621829 GBP7Q8N8V2 638 aaPredicted RBP13.34□□□□□ -0.27
CLTC-215ENST00000621829 GJB2P29033 226 aa13.34□□□□□ -0.27
CLTC-215ENST00000621829 RNF168Q8IYW5 571 aaPredicted RBP13.33□□□□□ -0.27
CLTC-215ENST00000621829 ERCC3P19447 782 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 INPP5BP32019 993 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 TCHPQ9BT92 498 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 UBA5Q9GZZ9 404 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.33□□□□□ -0.285e-7■■□□□ 11.5
CLTC-215ENST00000621829 MTIF2P46199 727 aaKnown RBP13.33□□□□□ -0.28
CLTC-215ENST00000621829 HDXQ7Z353 690 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 PTGS1P23219 599 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 KRT32Q14532 448 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 LMNTD2Q8IXW0 634 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 IKBKGQ9Y6K9 419 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms