RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 RUFY2Q8WXA3 655 aa9.94□□□□□ -0.82
PTPDC1-204ENST00000620992 USP26Q9BXU7 913 aa9.94□□□□□ -0.82
PTPDC1-204ENST00000620992 A2ML1A8K2U0 1454 aa9.94□□□□□ -0.82
PTPDC1-204ENST00000620992 CDK12Q9NYV4 1490 aaPredicted RBP9.94□□□□□ -0.82
PTPDC1-204ENST00000620992 NASPP49321 788 aaPredicted RBP9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 CEBPZQ03701 1054 aaKnown RBP9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 KIF6Q6ZMV9 814 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 CCAR2Q8N163 923 aaKnown RBP9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 ABCF2Q9UG63 623 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 TTC21BQ7Z4L5 1316 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 PRR36Q9H6K5 1346 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 NCOA3Q9Y6Q9 1424 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 G2E3Q7L622 706 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 MPHOSPH8Q99549 860 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 CHL1O00533 1208 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 GPTP24298 496 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 NUCB2P80303 420 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 KIAA2012Q0VF49 1180 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 PKP1Q13835 747 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 ZSCAN29Q8IWY8 852 aaPredicted RBP9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 BICD2Q8TD16 824 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 UBAP1LF5GYI3 381 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 TRIM29Q14134 588 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 ZGPATQ8N5A5 531 aaKnown RBP9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 AATKQ6ZMQ8 1374 aa9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 CPSF1Q10570 1443 aaKnown RBP9.93□□□□□ -0.82
PTPDC1-204ENST00000620992 BTBD11A6QL63 1104 aa9.92□□□□□ -0.82
PTPDC1-204ENST00000620992 CCDC34Q96HJ3 373 aa9.92□□□□□ -0.82
PTPDC1-204ENST00000620992 KIF3AQ9Y496 699 aa9.92□□□□□ -0.82
PTPDC1-204ENST00000620992 BECN2A8MW95 431 aa9.92□□□□□ -0.82
PTPDC1-204ENST00000620992 PRPF40AO75400 957 aaKnown RBP9.92□□□□□ -0.82
PTPDC1-204ENST00000620992 TNRQ92752 1358 aa9.92□□□□□ -0.82
PTPDC1-204ENST00000620992 CPS1P31327 1500 aa9.92□□□□□ -0.82
PTPDC1-204ENST00000620992 RICTORQ6R327 1708 aa9.92□□□□□ -0.82
PTPDC1-204ENST00000620992 CLCN1P35523 988 aa9.92□□□□□ -0.82
PTPDC1-204ENST00000620992 PIP4K2AP48426 406 aaPredicted RBP9.92□□□□□ -0.82
PTPDC1-204ENST00000620992 NEK4P51957 841 aa9.92□□□□□ -0.82
PTPDC1-204ENST00000620992 CNKSR2Q8WXI2 1034 aa9.92□□□□□ -0.82
PTPDC1-204ENST00000620992 ERC2O15083 957 aa9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 STK3Q13188 491 aa9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 CCAR1Q8IX12 1150 aaKnown RBP9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 PTPRCP08575 1304 aa9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 ERICH2A1L162 156 aa9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 DCAF8L1A6NGE4 600 aa9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 CLTCQ00610 1675 aaKnown RBP9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 RTL1A6NKG5 1358 aa9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 SRGAP3O43295 1099 aa9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 ECM2O94769 699 aaPredicted RBP9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 AK9Q5TCS8 1911 aa9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 MTHFSDQ2M296 383 aaKnown RBP9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 MPNDQ8N594 471 aa9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 SYAP1Q96A49 352 aaPredicted RBP9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 CHAMP1Q96JM3 812 aa9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 PCMTD1Q96MG8 357 aaPredicted RBP9.91□□□□□ -0.82
PTPDC1-204ENST00000620992 TSPOAP1O95153 1857 aa9.9□□□□□ -0.82
PTPDC1-204ENST00000620992 GNAI2P04899 355 aa9.9□□□□□ -0.82
PTPDC1-204ENST00000620992 CHMP4BP1P59074 171 aa9.9□□□□□ -0.82
PTPDC1-204ENST00000620992 CCDC43Q96MW1 224 aaKnown RBP9.9□□□□□ -0.82
PTPDC1-204ENST00000620992 PHF8Q9UPP1 1060 aa9.9□□□□□ -0.82
PTPDC1-204ENST00000620992 PHF14O94880 888 aa9.9□□□□□ -0.82
PTPDC1-204ENST00000620992 KLHL40Q2TBA0 621 aa9.9□□□□□ -0.82
PTPDC1-204ENST00000620992 LRRFIP1Q32MZ4 808 aaKnown RBP9.9□□□□□ -0.82
PTPDC1-204ENST00000620992 FMNL2Q96PY5 1086 aa9.9□□□□□ -0.82
PTPDC1-204ENST00000620992 CDC42BPGQ6DT37 1551 aa9.9□□□□□ -0.82
PTPDC1-204ENST00000620992 ZBTB3Q9H5J0 574 aa9.9□□□□□ -0.83
PTPDC1-204ENST00000620992 ACSBG1Q96GR2 724 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 MAP3K19Q56UN5 1328 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 CCT4P50991 539 aaKnown RBP9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 PDE1AP54750 535 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 SRCIN1Q9C0H9 1055 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 SPG7Q9UQ90 795 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 ERBB4Q15303 1308 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 CCDC57Q2TAC2 916 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 RBM27Q9P2N5 1060 aaKnown RBP9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 SMC3Q9UQE7 1217 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 PPFIA3O75145 1194 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 IDH1O75874 414 aaKnown RBP9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 GNAI3P08754 354 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 SLC4A8Q2Y0W8 1093 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 RNF20Q5VTR2 975 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 TRMT1LQ7Z2T5 733 aaKnown RBP9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 RNF214Q8ND24 703 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 CEP89Q96ST8 783 aa9.89□□□□□ -0.83
PTPDC1-204ENST00000620992 LRRCC1Q9C099 1032 aa9.88□□□□□ -0.83
PTPDC1-204ENST00000620992 ROBO2Q9HCK4 1378 aa9.88□□□□□ -0.83
PTPDC1-204ENST00000620992 KIF24Q5T7B8 1368 aa9.88□□□□□ -0.83
PTPDC1-204ENST00000620992 TBC1D2BQ9UPU7 963 aa9.88□□□□□ -0.83
PTPDC1-204ENST00000620992 ATP10DQ9P241 1426 aa9.88□□□□□ -0.83
PTPDC1-204ENST00000620992 DLC1Q96QB1 1528 aa9.88□□□□□ -0.83
PTPDC1-204ENST00000620992 ATP5J2-PTCD1G3V325 749 aa9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 CCDC173Q0VFZ6 552 aa9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 GOLGA6L19H0YKK7 550 aa9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 MYCNP04198 464 aaPredicted RBP9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 FLIIQ13045 1269 aa9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 GRM1Q13255 1194 aa9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 CCDC82Q8N4S0 544 aa9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 C8orf37Q96NL8 207 aa9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 UPF3BQ9BZI7 483 aaKnown RBP9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 ZSCAN23Q3MJ62 389 aa9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 HSP90AB4PQ58FF6 505 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms