RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 HMOX1P09601 288 aa29.79■■■□□ 2.36
SRRT-218ENST00000620394 KLRG1Q96E93 195 aa29.79■■■□□ 2.36
SRRT-218ENST00000620394 AFDNP55196 1824 aaKnown RBP29.79■■■□□ 2.36
SRRT-218ENST00000620394 NRXN2Q9P2S2 1712 aa29.79■■■□□ 2.36
SRRT-218ENST00000620394 POLRMTO00411 1230 aaKnown RBP29.78■■■□□ 2.36
SRRT-218ENST00000620394 ZC3H4Q9UPT8 1303 aaKnown RBP29.76■■■□□ 2.36
SRRT-218ENST00000620394 CHRNA5P30532 468 aa29.76■■■□□ 2.35
SRRT-218ENST00000620394 UBR2Q8IWV8 1755 aa29.75■■■□□ 2.35
SRRT-218ENST00000620394 INTS5Q6P9B9 1019 aaKnown RBP29.75■■■□□ 2.35
SRRT-218ENST00000620394 TIAM2Q8IVF5 1701 aa29.75■■■□□ 2.35
SRRT-218ENST00000620394 JMYQ8N9B5 988 aa29.75■■■□□ 2.35
SRRT-218ENST00000620394 SLC52A2Q9HAB3 445 aa29.75■■■□□ 2.35
SRRT-218ENST00000620394 ZPR1O75312 459 aa29.74■■■□□ 2.35
SRRT-218ENST00000620394 TM4SF1P30408 202 aa29.73■■■□□ 2.35
SRRT-218ENST00000620394 SOS1Q07889 1333 aaPredicted RBP29.72■■■□□ 2.35
SRRT-218ENST00000620394 RNMTO43148 476 aaKnown RBP29.72■■■□□ 2.35
SRRT-218ENST00000620394 MTHFSDQ2M296 383 aaKnown RBP29.72■■■□□ 2.35
SRRT-218ENST00000620394 HTRA3P83110 453 aa29.71■■■□□ 2.35
SRRT-218ENST00000620394 SMC1BQ8NDV3 1235 aa29.71■■■□□ 2.35
SRRT-218ENST00000620394 RRAGCQ9HB90 399 aa29.71■■■□□ 2.35
SRRT-218ENST00000620394 LGR6Q9HBX8 967 aa29.71■■■□□ 2.35
SRRT-218ENST00000620394 SIPA1L3O60292 1781 aaPredicted RBP29.7■■■□□ 2.35
SRRT-218ENST00000620394 COL15A1P39059 1388 aa29.7■■■□□ 2.35
SRRT-218ENST00000620394 USPL1Q5W0Q7 1092 aa29.7■■■□□ 2.35
SRRT-218ENST00000620394 DNAJC10Q8IXB1 793 aa29.7■■■□□ 2.35
SRRT-218ENST00000620394 RASSF7Q02833 373 aa29.66■■■□□ 2.34
SRRT-218ENST00000620394 NARFQ9UHQ1 456 aa29.66■■■□□ 2.34
SRRT-218ENST00000620394 CCDC88AQ3V6T2 1871 aa29.65■■■□□ 2.34
SRRT-218ENST00000620394 NFIXQ14938 502 aa29.65■■■□□ 2.34
SRRT-218ENST00000620394 CYP19A1P11511 503 aaPredicted RBP29.64■■■□□ 2.34
SRRT-218ENST00000620394 LMNB1P20700 586 aa29.64■■■□□ 2.34
SRRT-218ENST00000620394 U2SURPO15042 1029 aaKnown RBP29.63■■■□□ 2.33
SRRT-218ENST00000620394 CNGB1Q14028 1251 aaPredicted RBP29.63■■■□□ 2.33
SRRT-218ENST00000620394 SCN7AQ01118 1682 aa29.62■■■□□ 2.33
SRRT-218ENST00000620394 COL13A1Q5TAT6 717 aaPredicted RBP29.61■■■□□ 2.33
SRRT-218ENST00000620394 GAS2L2Q8NHY3 880 aa29.61■■■□□ 2.33
SRRT-218ENST00000620394 ZBTB1Q9Y2K1 713 aa29.61■■■□□ 2.33
SRRT-218ENST00000620394 SLC39A6Q13433 755 aa29.6■■■□□ 2.33
SRRT-218ENST00000620394 GLTPD2A6NH11 291 aa29.59■■■□□ 2.33
SRRT-218ENST00000620394 VSIG10Q8N0Z9 540 aa29.59■■■□□ 2.33
SRRT-218ENST00000620394 TTLL6Q8N841 843 aa29.59■■■□□ 2.33
SRRT-218ENST00000620394 CFAP53Q96M91 514 aa29.59■■■□□ 2.33
SRRT-218ENST00000620394 SERPINB2P05120 415 aa29.58■■■□□ 2.33
SRRT-218ENST00000620394 VEGFAP15692 232 aaPredicted RBP29.58■■■□□ 2.33
SRRT-218ENST00000620394 ANKRD31Q8N7Z5 1873 aa29.58■■■□□ 2.33
SRRT-218ENST00000620394 BCL2L12Q9HB09 334 aa29.58■■■□□ 2.33
SRRT-218ENST00000620394 CARMIL3Q8ND23 1372 aa29.57■■■□□ 2.32
SRRT-218ENST00000620394 PPP2R1AP30153 589 aa29.57■■■□□ 2.32
SRRT-218ENST00000620394 RSPH6AQ9H0K4 717 aa29.57■■■□□ 2.32
SRRT-218ENST00000620394 DICER1Q9UPY3 1922 aaKnown RBP29.57■■■□□ 2.32
SRRT-218ENST00000620394 CEMIPQ8WUJ3 1361 aa29.56■■■□□ 2.32
SRRT-218ENST00000620394 GNAT3A8MTJ3 354 aa29.56■■■□□ 2.32
SRRT-218ENST00000620394 COL11A2P13942 1736 aaPredicted RBP29.56■■■□□ 2.32
SRRT-218ENST00000620394 PRELPP51888 382 aa29.55■■■□□ 2.32
SRRT-218ENST00000620394 C2CD5Q86YS7 1000 aa29.55■■■□□ 2.32
SRRT-218ENST00000620394 IL17REQ8NFR9 667 aa29.54■■■□□ 2.32
SRRT-218ENST00000620394 FER1L6Q2WGJ9 1857 aa29.54■■■□□ 2.32
SRRT-218ENST00000620394 H0YIN7 160 aa29.53■■■□□ 2.32
SRRT-218ENST00000620394 TNS4Q8IZW8 715 aa29.53■■■□□ 2.32
SRRT-218ENST00000620394 NFKBIEO00221 500 aa29.52■■■□□ 2.32
SRRT-218ENST00000620394 PRKAR2BP31323 418 aa29.52■■■□□ 2.32
SRRT-218ENST00000620394 PHACTR3Q96KR7 559 aa29.51■■■□□ 2.31
SRRT-218ENST00000620394 NUDCQ9Y266 331 aa29.51■■■□□ 2.31
SRRT-218ENST00000620394 TEFQ10587 303 aa29.5■■■□□ 2.31
SRRT-218ENST00000620394 PDZRN3Q9UPQ7 1066 aa29.5■■■□□ 2.31
SRRT-218ENST00000620394 A0A087WZG4 1122 aa29.49■■■□□ 2.31
SRRT-218ENST00000620394 STARD3NLO95772 234 aa29.49■■■□□ 2.31
SRRT-218ENST00000620394 CANXP27824 592 aaKnown RBP29.49■■■□□ 2.31
SRRT-218ENST00000620394 TTC5Q8N0Z6 440 aa29.49■■■□□ 2.31
SRRT-218ENST00000620394 HEG1Q9ULI3 1381 aa29.49■■■□□ 2.31
SRRT-218ENST00000620394 ZNF790Q6PG37 636 aa29.48■■■□□ 2.31
SRRT-218ENST00000620394 ARFGEF2Q9Y6D5 1785 aa29.48■■■□□ 2.31
SRRT-218ENST00000620394 EIF5P55010 431 aaKnown RBP29.47■■■□□ 2.31
SRRT-218ENST00000620394 DPY19L2Q6NUT2 758 aa29.47■■■□□ 2.31
SRRT-218ENST00000620394 BICDL1Q6ZP65 573 aa29.47■■■□□ 2.31
SRRT-218ENST00000620394 HSPA1AP0DMV8 641 aaKnown RBP29.46■■■□□ 2.31
SRRT-218ENST00000620394 HSPA1BP0DMV9 641 aaKnown RBP29.46■■■□□ 2.31
SRRT-218ENST00000620394 ZNF496Q96IT1 587 aaPredicted RBP29.46■■■□□ 2.31
SRRT-218ENST00000620394 BCORQ6W2J9 1755 aa29.46■■■□□ 2.31
SRRT-218ENST00000620394 CACNA1SQ13698 1873 aa29.46■■■□□ 2.31
SRRT-218ENST00000620394 PCNTO95613 3336 aa29.45■■■□□ 2.31
SRRT-218ENST00000620394 CAPN15O75808 1086 aa29.45■■■□□ 2.31
SRRT-218ENST00000620394 PDE6BP35913 854 aa29.45■■■□□ 2.31
SRRT-218ENST00000620394 U2AF1L5P0DN76 240 aaPredicted RBP29.44■■■□□ 2.3
SRRT-218ENST00000620394 U2AF1Q01081 240 aaKnown RBP eCLIP29.44■■■□□ 2.3
SRRT-218ENST00000620394 TBC1D9BQ66K14 1250 aa29.43■■■□□ 2.3
SRRT-218ENST00000620394 BRIP1Q9BX63 1249 aa29.43■■■□□ 2.3
SRRT-218ENST00000620394 ZNF622Q969S3 477 aaKnown RBP eCLIP29.42■■■□□ 2.34e-14■■□□□ 14.3
SRRT-218ENST00000620394 LTBP3Q9NS15 1303 aa29.42■■■□□ 2.3
SRRT-218ENST00000620394 POTECB2RU33 542 aa29.41■■■□□ 2.3
SRRT-218ENST00000620394 ERFEQ4G0M1 354 aa29.41■■■□□ 2.3
SRRT-218ENST00000620394 PRR5LQ6MZQ0 368 aa29.41■■■□□ 2.3
SRRT-218ENST00000620394 TEX13AQ9BXU3 409 aaPredicted RBP29.41■■■□□ 2.3
SRRT-218ENST00000620394 DLG5Q8TDM6 1919 aa29.4■■■□□ 2.3
SRRT-218ENST00000620394 C21orf2O43822 256 aa29.39■■■□□ 2.3
SRRT-218ENST00000620394 FMNL2Q96PY5 1086 aa29.39■■■□□ 2.3
SRRT-218ENST00000620394 TAOK3Q9H2K8 898 aa29.39■■■□□ 2.3
SRRT-218ENST00000620394 IL6STP40189 918 aaPredicted RBP29.38■■■□□ 2.29
SRRT-218ENST00000620394 SLX4Q8IY92 1834 aa29.37■■■□□ 2.29
SRRT-218ENST00000620394 ZNF330Q9Y3S2 320 aaPredicted RBP29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms