RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 INTS4Q96HW7 963 aaKnown RBP14.62□□□□□ -0.07
SPCS1-206ENST00000619898 ERCC6L2Q5T890 1561 aa14.61□□□□□ -0.07
SPCS1-206ENST00000619898 UVSSAQ2YD98 709 aa14.61□□□□□ -0.07
SPCS1-206ENST00000619898 CKAP2LQ8IYA6 745 aa14.61□□□□□ -0.07
SPCS1-206ENST00000619898 BOLA2Q9H3K6 86 aa14.61□□□□□ -0.07
SPCS1-206ENST00000619898 SHROOM2Q13796 1616 aa14.61□□□□□ -0.07
SPCS1-206ENST00000619898 BRPF1P55201 1214 aaPredicted RBP14.61□□□□□ -0.07
SPCS1-206ENST00000619898 HOMER1Q86YM7 354 aa14.61□□□□□ -0.07
SPCS1-206ENST00000619898 RAPGEF4Q8WZA2 1011 aa14.61□□□□□ -0.07
SPCS1-206ENST00000619898 SPHKAPQ2M3C7 1700 aa14.61□□□□□ -0.07
SPCS1-206ENST00000619898 DDX11Q96FC9 970 aa14.61□□□□□ -0.07
SPCS1-206ENST00000619898 CCDC8Q9H0W5 538 aaPredicted RBP14.61□□□□□ -0.07
SPCS1-206ENST00000619898 TFIP11Q9UBB9 837 aaKnown RBP14.61□□□□□ -0.07
SPCS1-206ENST00000619898 ECHDC1Q9NTX5 307 aa14.6□□□□□ -0.07
SPCS1-206ENST00000619898 FMNL2Q96PY5 1086 aa14.6□□□□□ -0.07
SPCS1-206ENST00000619898 PIK3R4Q99570 1358 aa14.6□□□□□ -0.07
SPCS1-206ENST00000619898 EDC4Q6P2E9 1401 aaKnown RBP14.59□□□□□ -0.07
SPCS1-206ENST00000619898 NECAB1Q8N987 351 aa14.59□□□□□ -0.07
SPCS1-206ENST00000619898 MYL6BP14649 208 aa14.59□□□□□ -0.07
SPCS1-206ENST00000619898 NOLC1Q14978 699 aaKnown RBP eCLIP14.59□□□□□ -0.07
SPCS1-206ENST00000619898 TOMM22Q9NS69 142 aa14.59□□□□□ -0.07
SPCS1-206ENST00000619898 POGZQ7Z3K3 1410 aa14.59□□□□□ -0.07
SPCS1-206ENST00000619898 RTL1A6NKG5 1358 aa14.59□□□□□ -0.07
SPCS1-206ENST00000619898 PDCL2Q8N4E4 241 aa14.59□□□□□ -0.07
SPCS1-206ENST00000619898 CCDC112Q8NEF3 446 aa14.59□□□□□ -0.07
SPCS1-206ENST00000619898 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.58□□□□□ -0.07
SPCS1-206ENST00000619898 PNMA6EA0A0J9YXQ4 647 aa14.58□□□□□ -0.08
SPCS1-206ENST00000619898 AK2P54819 239 aa14.58□□□□□ -0.08
SPCS1-206ENST00000619898 AMOTL2Q9Y2J4 779 aa14.58□□□□□ -0.08
SPCS1-206ENST00000619898 ERBB4Q15303 1308 aa14.58□□□□□ -0.08
SPCS1-206ENST00000619898 CBX1P83916 185 aa14.58□□□□□ -0.08
SPCS1-206ENST00000619898 DNM1Q05193 864 aaKnown RBP14.58□□□□□ -0.08
SPCS1-206ENST00000619898 SYNE3Q6ZMZ3 975 aa14.58□□□□□ -0.08
SPCS1-206ENST00000619898 FILIP1Q7Z7B0 1213 aa14.58□□□□□ -0.08
SPCS1-206ENST00000619898 GPT2Q8TD30 523 aa14.58□□□□□ -0.08
SPCS1-206ENST00000619898 SCAND2PQ9GZW5 306 aaPredicted RBP14.58□□□□□ -0.08
SPCS1-206ENST00000619898 TCEANC2Q96MN5 208 aa14.58□□□□□ -0.08
SPCS1-206ENST00000619898 NAT10Q9H0A0 1025 aaKnown RBP14.58□□□□□ -0.08
SPCS1-206ENST00000619898 ZCCHC11Q5TAX3 1644 aaKnown RBP14.57□□□□□ -0.08
SPCS1-206ENST00000619898 F13A1P00488 732 aa14.57□□□□□ -0.08
SPCS1-206ENST00000619898 ME1P48163 572 aa14.57□□□□□ -0.08
SPCS1-206ENST00000619898 UHRF1BP1LA0JNW5 1464 aa14.57□□□□□ -0.08
SPCS1-206ENST00000619898 ABCA6Q8N139 1617 aa14.57□□□□□ -0.08
SPCS1-206ENST00000619898 WASHC4Q2M389 1173 aa14.57□□□□□ -0.08
SPCS1-206ENST00000619898 CPLX2Q6PUV4 134 aaKnown RBP14.57□□□□□ -0.08
SPCS1-206ENST00000619898 MPRIPQ6WCQ1 1025 aa14.57□□□□□ -0.08
SPCS1-206ENST00000619898 CPA1P15085 419 aa14.57□□□□□ -0.08
SPCS1-206ENST00000619898 LRRFIP1Q32MZ4 808 aaKnown RBP14.57□□□□□ -0.08
SPCS1-206ENST00000619898 EYA1Q99502 592 aa14.57□□□□□ -0.08
SPCS1-206ENST00000619898 KIF24Q5T7B8 1368 aa14.56□□□□□ -0.08
SPCS1-206ENST00000619898 SOS1Q07889 1333 aaPredicted RBP14.56□□□□□ -0.08
SPCS1-206ENST00000619898 DTNBO60941 627 aa14.56□□□□□ -0.08
SPCS1-206ENST00000619898 GADD45BO75293 160 aaPredicted RBP14.56□□□□□ -0.08
SPCS1-206ENST00000619898 PDIA4P13667 645 aaKnown RBP14.56□□□□□ -0.08
SPCS1-206ENST00000619898 SYT1P21579 422 aa14.56□□□□□ -0.08
SPCS1-206ENST00000619898 PALD1Q9ULE6 856 aa14.56□□□□□ -0.08
SPCS1-206ENST00000619898 MAP3K19Q56UN5 1328 aa14.56□□□□□ -0.08
SPCS1-206ENST00000619898 BRD1O95696 1058 aa14.56□□□□□ -0.08
SPCS1-206ENST00000619898 ZNF853P0CG23 659 aa14.56□□□□□ -0.08
SPCS1-206ENST00000619898 CFAP45Q9UL16 551 aa14.56□□□□□ -0.08
SPCS1-206ENST00000619898 EFCAB6Q5THR3 1501 aa14.56□□□□□ -0.08
SPCS1-206ENST00000619898 SMC2O95347 1197 aa14.55□□□□□ -0.08
SPCS1-206ENST00000619898 APPP05067 770 aa14.55□□□□□ -0.08
SPCS1-206ENST00000619898 CCAR2Q8N163 923 aaKnown RBP14.55□□□□□ -0.08
SPCS1-206ENST00000619898 EVI5LQ96CN4 794 aa14.55□□□□□ -0.08
SPCS1-206ENST00000619898 PRIMPOLQ96LW4 560 aa14.55□□□□□ -0.08
SPCS1-206ENST00000619898 CHPF2Q9P2E5 772 aa14.55□□□□□ -0.08
SPCS1-206ENST00000619898 KRT32Q14532 448 aa14.55□□□□□ -0.08
SPCS1-206ENST00000619898 DBF4Q9UBU7 674 aaPredicted RBP14.55□□□□□ -0.08
SPCS1-206ENST00000619898 RALYLQ86SE5 291 aaKnown RBP14.55□□□□□ -0.08
SPCS1-206ENST00000619898 ZNF396Q96N95 335 aaPredicted RBP14.55□□□□□ -0.08
SPCS1-206ENST00000619898 KIF2CQ99661 725 aa14.55□□□□□ -0.08
SPCS1-206ENST00000619898 PHAXQ9H814 394 aaKnown RBP14.55□□□□□ -0.08
SPCS1-206ENST00000619898 C16orf45Q96MC5 204 aaPredicted RBP14.55□□□□□ -0.08
SPCS1-206ENST00000619898 TRDNQ13061 729 aa14.54□□□□□ -0.08
SPCS1-206ENST00000619898 STK38Q15208 465 aa14.54□□□□□ -0.08
SPCS1-206ENST00000619898 ANKLE2Q86XL3 938 aa14.54□□□□□ -0.08
SPCS1-206ENST00000619898 MAP3K2Q9Y2U5 619 aa14.54□□□□□ -0.08
SPCS1-206ENST00000619898 CCDC34Q96HJ3 373 aa14.54□□□□□ -0.08
SPCS1-206ENST00000619898 TMX4Q9H1E5 349 aaPredicted RBP14.54□□□□□ -0.08
SPCS1-206ENST00000619898 IQGAP1P46940 1657 aa14.54□□□□□ -0.08
SPCS1-206ENST00000619898 CREBRFQ8IUR6 639 aa14.53□□□□□ -0.08
SPCS1-206ENST00000619898 RBM8AQ9Y5S9 174 aaKnown RBP14.53□□□□□ -0.08
SPCS1-206ENST00000619898 FLT4P35916 1363 aa14.52□□□□□ -0.08
SPCS1-206ENST00000619898 KDM4AO75164 1064 aa14.52□□□□□ -0.08
SPCS1-206ENST00000619898 TRIM29Q14134 588 aa14.52□□□□□ -0.08
SPCS1-206ENST00000619898 CHD1O14646 1710 aa14.52□□□□□ -0.08
SPCS1-206ENST00000619898 FAM135BQ49AJ0 1406 aa14.52□□□□□ -0.08
SPCS1-206ENST00000619898 ZNF165P49910 485 aa14.52□□□□□ -0.08
SPCS1-206ENST00000619898 PA2G4Q9UQ80 394 aaKnown RBP14.52□□□□□ -0.08
SPCS1-206ENST00000619898 RNF17Q9BXT8 1623 aaKnown RBP14.52□□□□□ -0.08
SPCS1-206ENST00000619898 PTCH1Q13635 1447 aa14.52□□□□□ -0.09
SPCS1-206ENST00000619898 KIAA0232Q92628 1395 aa14.52□□□□□ -0.09
SPCS1-206ENST00000619898 DDX19AQ9NUU7 478 aaKnown RBP14.52□□□□□ -0.09
SPCS1-206ENST00000619898 CEBPAP49715 358 aaPredicted RBP14.52□□□□□ -0.09
SPCS1-206ENST00000619898 AEBP2Q6ZN18 517 aaPredicted RBP14.52□□□□□ -0.09
SPCS1-206ENST00000619898 PPP4R3BQ5MIZ7 849 aa14.51□□□□□ -0.09
SPCS1-206ENST00000619898 MNS1Q8NEH6 495 aa14.51□□□□□ -0.09
SPCS1-206ENST00000619898 CLIP2Q9UDT6 1046 aa14.51□□□□□ -0.09
SPCS1-206ENST00000619898 TTC21AQ8NDW8 1320 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms