RNA–Protein interactions for RNA: ENST00000619368.4

RDM1-225, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 506 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-225ENST00000619368 CHRNA5P30532 468 aa12.27□□□□□ -0.45
RDM1-225ENST00000619368 NRXN2Q9P2S2 1712 aa12.27□□□□□ -0.45
RDM1-225ENST00000619368 SIPA1L3O60292 1781 aaPredicted RBP12.27□□□□□ -0.45
RDM1-225ENST00000619368 DLEC1Q9Y238 1755 aa12.26□□□□□ -0.45
RDM1-225ENST00000619368 ZPR1O75312 459 aa12.26□□□□□ -0.45
RDM1-225ENST00000619368 CNGB1Q14028 1251 aaPredicted RBP12.26□□□□□ -0.45
RDM1-225ENST00000619368 COL3A1P02461 1466 aaPredicted RBP12.26□□□□□ -0.45
RDM1-225ENST00000619368 DALRD3Q5D0E6 543 aaKnown RBP12.25□□□□□ -0.45
RDM1-225ENST00000619368 C9orf131Q5VYM1 1079 aa12.25□□□□□ -0.45
RDM1-225ENST00000619368 BCL2L12Q9HB09 334 aa12.25□□□□□ -0.45
RDM1-225ENST00000619368 NMRK2Q9NPI5 230 aa12.25□□□□□ -0.45
RDM1-225ENST00000619368 NARFQ9UHQ1 456 aa12.25□□□□□ -0.45
RDM1-225ENST00000619368 ZBTB1Q9Y2K1 713 aa12.25□□□□□ -0.45
RDM1-225ENST00000619368 COL15A1P39059 1388 aa12.24□□□□□ -0.45
RDM1-225ENST00000619368 NFIXQ14938 502 aa12.24□□□□□ -0.45
RDM1-225ENST00000619368 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
RDM1-225ENST00000619368 TOMM70O94826 608 aa12.23□□□□□ -0.45
RDM1-225ENST00000619368 CANXP27824 592 aaKnown RBP12.23□□□□□ -0.45
RDM1-225ENST00000619368 IL17REQ8NFR9 667 aa12.23□□□□□ -0.45
RDM1-225ENST00000619368 ANKRD31Q8N7Z5 1873 aa12.23□□□□□ -0.45
RDM1-225ENST00000619368 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
RDM1-225ENST00000619368 U2SURPO15042 1029 aaKnown RBP12.22□□□□□ -0.45
RDM1-225ENST00000619368 SERPINB2P05120 415 aa12.21□□□□□ -0.45
RDM1-225ENST00000619368 EIF5P55010 431 aaKnown RBP12.21□□□□□ -0.45
RDM1-225ENST00000619368 ZNF496Q96IT1 587 aaPredicted RBP12.21□□□□□ -0.45
RDM1-225ENST00000619368 RNF181Q9P0P0 153 aa12.21□□□□□ -0.45
RDM1-225ENST00000619368 GNAT3A8MTJ3 354 aa12.2□□□□□ -0.46
RDM1-225ENST00000619368 TTC5Q8N0Z6 440 aa12.2□□□□□ -0.46
RDM1-225ENST00000619368 WDR90Q96KV7 1748 aa12.2□□□□□ -0.46
RDM1-225ENST00000619368 SCN7AQ01118 1682 aa12.19□□□□□ -0.46
RDM1-225ENST00000619368 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
RDM1-225ENST00000619368 CARMIL3Q8ND23 1372 aa12.19□□□□□ -0.46
RDM1-225ENST00000619368 HEG1Q9ULI3 1381 aa12.19□□□□□ -0.46
RDM1-225ENST00000619368 CACNA1SQ13698 1873 aa12.19□□□□□ -0.46
RDM1-225ENST00000619368 STARD3NLO95772 234 aa12.19□□□□□ -0.46
RDM1-225ENST00000619368 APLP1P51693 650 aa12.19□□□□□ -0.46
RDM1-225ENST00000619368 TEFQ10587 303 aa12.19□□□□□ -0.46
RDM1-225ENST00000619368 ZNF790Q6PG37 636 aa12.19□□□□□ -0.46
RDM1-225ENST00000619368 BICDL1Q6ZP65 573 aa12.19□□□□□ -0.46
RDM1-225ENST00000619368 GAS2L2Q8NHY3 880 aa12.19□□□□□ -0.46
RDM1-225ENST00000619368 PHACTR3Q96KR7 559 aa12.19□□□□□ -0.46
RDM1-225ENST00000619368 COL11A2P13942 1736 aaPredicted RBP12.18□□□□□ -0.46
RDM1-225ENST00000619368 DICER1Q9UPY3 1922 aaKnown RBP12.18□□□□□ -0.46
RDM1-225ENST00000619368 KCNQ3O43525 872 aa12.18□□□□□ -0.46
RDM1-225ENST00000619368 PRELPP51888 382 aa12.18□□□□□ -0.46
RDM1-225ENST00000619368 RASSF7Q02833 373 aa12.18□□□□□ -0.46
RDM1-225ENST00000619368 TBC1D9BQ66K14 1250 aa12.18□□□□□ -0.46
RDM1-225ENST00000619368 C2CD5Q86YS7 1000 aa12.18□□□□□ -0.46
RDM1-225ENST00000619368 DNAJC5GQ8N7S2 189 aa12.18□□□□□ -0.46
RDM1-225ENST00000619368 RRAGCQ9HB90 399 aa12.18□□□□□ -0.46
RDM1-225ENST00000619368 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
RDM1-225ENST00000619368 TIAM2Q8IVF5 1701 aa12.17□□□□□ -0.46
RDM1-225ENST00000619368 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
RDM1-225ENST00000619368 A0A087WZG4 1122 aa12.17□□□□□ -0.46
RDM1-225ENST00000619368 A1BGP04217 495 aa12.17□□□□□ -0.46
RDM1-225ENST00000619368 PRKAR2BP31323 418 aa12.17□□□□□ -0.46
RDM1-225ENST00000619368 TTLL6Q8N841 843 aa12.17□□□□□ -0.46
RDM1-225ENST00000619368 RBM46Q8TBY0 533 aaKnown RBP12.17□□□□□ -0.46
RDM1-225ENST00000619368 TBC1D2BQ9UPU7 963 aa12.17□□□□□ -0.46
RDM1-225ENST00000619368 BCORQ6W2J9 1755 aa12.17□□□□□ -0.46
RDM1-225ENST00000619368 FER1L6Q2WGJ9 1857 aa12.17□□□□□ -0.46
RDM1-225ENST00000619368 H0YIN7 160 aa12.16□□□□□ -0.46
RDM1-225ENST00000619368 C16orf71Q8IYS4 520 aaPredicted RBP12.16□□□□□ -0.46
RDM1-225ENST00000619368 CCDC24Q8N4L8 307 aa12.16□□□□□ -0.46
RDM1-225ENST00000619368 FMNL2Q96PY5 1086 aa12.16□□□□□ -0.46
RDM1-225ENST00000619368 TEX13AQ9BXU3 409 aaPredicted RBP12.16□□□□□ -0.46
RDM1-225ENST00000619368 RSPH6AQ9H0K4 717 aa12.16□□□□□ -0.46
RDM1-225ENST00000619368 ZNF330Q9Y3S2 320 aaPredicted RBP12.16□□□□□ -0.46
RDM1-225ENST00000619368 BTBD11A6QL63 1104 aa12.15□□□□□ -0.46
RDM1-225ENST00000619368 IL6STP40189 918 aaPredicted RBP12.15□□□□□ -0.46
RDM1-225ENST00000619368 HTRA3P83110 453 aa12.15□□□□□ -0.46
RDM1-225ENST00000619368 SLX4Q8IY92 1834 aa12.15□□□□□ -0.46
RDM1-225ENST00000619368 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
RDM1-225ENST00000619368 NFKBIEO00221 500 aa12.14□□□□□ -0.47
RDM1-225ENST00000619368 LMNB1P20700 586 aa12.14□□□□□ -0.47
RDM1-225ENST00000619368 FSTL1Q12841 308 aa12.14□□□□□ -0.47
RDM1-225ENST00000619368 PRR5LQ6MZQ0 368 aa12.14□□□□□ -0.47
RDM1-225ENST00000619368 CFAP53Q96M91 514 aa12.14□□□□□ -0.47
RDM1-225ENST00000619368 USP16Q9Y5T5 823 aa12.14□□□□□ -0.47
RDM1-225ENST00000619368 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
RDM1-225ENST00000619368 ARFGEF2Q9Y6D5 1785 aa12.13□□□□□ -0.47
RDM1-225ENST00000619368 PRAMEF22A3QJZ6 481 aa12.13□□□□□ -0.47
RDM1-225ENST00000619368 CAMTA2O94983 1202 aa12.13□□□□□ -0.47
RDM1-225ENST00000619368 PPP2R1AP30153 589 aa12.13□□□□□ -0.47
RDM1-225ENST00000619368 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
RDM1-225ENST00000619368 ZNF622Q969S3 477 aaKnown RBP eCLIP12.13□□□□□ -0.47
RDM1-225ENST00000619368 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
RDM1-225ENST00000619368 GLTPD2A6NH11 291 aa12.12□□□□□ -0.47
RDM1-225ENST00000619368 C21orf2O43822 256 aa12.12□□□□□ -0.47
RDM1-225ENST00000619368 U2AF1L5P0DN76 240 aaPredicted RBP12.12□□□□□ -0.47
RDM1-225ENST00000619368 PDE6BP35913 854 aa12.12□□□□□ -0.47
RDM1-225ENST00000619368 U2AF1Q01081 240 aaKnown RBP eCLIP12.12□□□□□ -0.47
RDM1-225ENST00000619368 MCM10Q7L590 875 aa12.12□□□□□ -0.47
RDM1-225ENST00000619368 ZNF219Q9P2Y4 722 aaPredicted RBP12.12□□□□□ -0.47
RDM1-225ENST00000619368 DCTN1Q14203 1278 aa12.11□□□□□ -0.47
RDM1-225ENST00000619368 DZIP3Q86Y13 1208 aaKnown RBP12.11□□□□□ -0.47
RDM1-225ENST00000619368 SETDB2Q96T68 719 aa12.11□□□□□ -0.47
RDM1-225ENST00000619368 NUDCQ9Y266 331 aa12.11□□□□□ -0.47
RDM1-225ENST00000619368 POTECB2RU33 542 aa12.1□□□□□ -0.47
RDM1-225ENST00000619368 VEGFAP15692 232 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms