RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 SPC24Q8NBT2 197 aa27.79■■■□□ 2.04
PCSK6-218ENST00000619160 RASEFQ8IZ41 740 aa27.78■■■□□ 2.04
PCSK6-218ENST00000619160 SNX14Q9Y5W7 946 aa27.78■■■□□ 2.04
PCSK6-218ENST00000619160 AMPHP49418 695 aa27.78■■■□□ 2.04
PCSK6-218ENST00000619160 UBE2HP62256 183 aa27.78■■■□□ 2.04
PCSK6-218ENST00000619160 DDX54Q8TDD1 881 aaKnown RBP27.78■■■□□ 2.04
PCSK6-218ENST00000619160 BBXQ8WY36 941 aaPredicted RBP27.78■■■□□ 2.04
PCSK6-218ENST00000619160 RPAP1Q9BWH6 1393 aaPredicted RBP27.77■■■□□ 2.04
PCSK6-218ENST00000619160 USP44Q9H0E7 712 aa27.77■■■□□ 2.04
PCSK6-218ENST00000619160 DLC1Q96QB1 1528 aa27.77■■■□□ 2.04
PCSK6-218ENST00000619160 A2ML1A8K2U0 1454 aa27.77■■■□□ 2.04
PCSK6-218ENST00000619160 SSH2Q76I76 1423 aa27.76■■■□□ 2.04
PCSK6-218ENST00000619160 CCDC83Q8IWF9 413 aa27.76■■■□□ 2.04
PCSK6-218ENST00000619160 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.76■■■□□ 2.04
PCSK6-218ENST00000619160 VPS37CA5D8V6 355 aaPredicted RBP27.76■■■□□ 2.03
PCSK6-218ENST00000619160 CASTP20810 708 aaKnown RBP27.76■■■□□ 2.03
PCSK6-218ENST00000619160 HMGN5P82970 282 aaKnown RBP27.76■■■□□ 2.03
PCSK6-218ENST00000619160 PPP1R42Q7Z4L9 355 aa27.76■■■□□ 2.03
PCSK6-218ENST00000619160 LIMCH1Q9UPQ0 1083 aa27.76■■■□□ 2.03
PCSK6-218ENST00000619160 UTP14CQ5TAP6 766 aaKnown RBP27.76■■■□□ 2.03
PCSK6-218ENST00000619160 OSCARQ8IYS5 282 aa27.75■■■□□ 2.03
PCSK6-218ENST00000619160 KDM4AO75164 1064 aa27.75■■■□□ 2.03
PCSK6-218ENST00000619160 F13A1P00488 732 aa27.75■■■□□ 2.03
PCSK6-218ENST00000619160 DNM1Q05193 864 aaKnown RBP27.75■■■□□ 2.03
PCSK6-218ENST00000619160 RUFY3Q7L099 469 aa27.75■■■□□ 2.03
PCSK6-218ENST00000619160 PRIMPOLQ96LW4 560 aa27.75■■■□□ 2.03
PCSK6-218ENST00000619160 SOS1Q07889 1333 aaPredicted RBP27.75■■■□□ 2.03
PCSK6-218ENST00000619160 LETM1O95202 739 aaPredicted RBP27.74■■■□□ 2.03
PCSK6-218ENST00000619160 OS9Q13438 667 aaPredicted RBP27.74■■■□□ 2.03
PCSK6-218ENST00000619160 SGSM2O43147 1006 aa27.74■■■□□ 2.03
PCSK6-218ENST00000619160 SRGAP3O43295 1099 aa27.74■■■□□ 2.03
PCSK6-218ENST00000619160 ATP6V1DQ9Y5K8 247 aa27.74■■■□□ 2.03
PCSK6-218ENST00000619160 RAD50Q92878 1312 aa27.74■■■□□ 2.03
PCSK6-218ENST00000619160 EIF2S2P20042 333 aaKnown RBP27.73■■■□□ 2.03
PCSK6-218ENST00000619160 RHPN1Q8TCX5 695 aa27.73■■■□□ 2.03
PCSK6-218ENST00000619160 KIF3AQ9Y496 699 aa27.73■■■□□ 2.03
PCSK6-218ENST00000619160 CNTROBQ8N137 903 aa27.72■■■□□ 2.03
PCSK6-218ENST00000619160 LTV1Q96GA3 475 aaPredicted RBP27.72■■■□□ 2.03
PCSK6-218ENST00000619160 EYA1Q99502 592 aa27.72■■■□□ 2.03
PCSK6-218ENST00000619160 LARGE1O95461 756 aa27.72■■■□□ 2.03
PCSK6-218ENST00000619160 PHAXQ9H814 394 aaKnown RBP27.72■■■□□ 2.03
PCSK6-218ENST00000619160 TMEM87AQ8NBN3 555 aa27.71■■■□□ 2.03
PCSK6-218ENST00000619160 GJB2P29033 226 aa27.71■■■□□ 2.03
PCSK6-218ENST00000619160 HDGFL1Q5TGJ6 251 aa27.7■■■□□ 2.03
PCSK6-218ENST00000619160 ESF1Q9H501 851 aaKnown RBP27.7■■■□□ 2.02
PCSK6-218ENST00000619160 DIAPH3Q9NSV4 1193 aa27.7■■■□□ 2.02
PCSK6-218ENST00000619160 JAKMIP1Q96N16 626 aaKnown RBP27.69■■■□□ 2.02
PCSK6-218ENST00000619160 PI4K2BQ8TCG2 481 aa27.69■■■□□ 2.02
PCSK6-218ENST00000619160 TTC14Q96N46 770 aa27.69■■■□□ 2.02
PCSK6-218ENST00000619160 LSG1Q9H089 658 aaKnown RBP27.69■■■□□ 2.02
PCSK6-218ENST00000619160 CHAF1AQ13111 956 aaPredicted RBP27.68■■■□□ 2.02
PCSK6-218ENST00000619160 FERMT3Q86UX7 667 aa27.68■■■□□ 2.02
PCSK6-218ENST00000619160 PRPF40BQ6NWY9 871 aaKnown RBP27.67■■■□□ 2.02
PCSK6-218ENST00000619160 SSH3Q8TE77 659 aa27.67■■■□□ 2.02
PCSK6-218ENST00000619160 GNAT3A8MTJ3 354 aa27.67■■■□□ 2.02
PCSK6-218ENST00000619160 CAMK4Q16566 473 aa27.67■■■□□ 2.02
PCSK6-218ENST00000619160 NUTM2GQ5VZR2 741 aa27.67■■■□□ 2.02
PCSK6-218ENST00000619160 BCL2L12Q9HB09 334 aa27.67■■■□□ 2.02
PCSK6-218ENST00000619160 PYCARDQ9ULZ3 195 aa27.67■■■□□ 2.02
PCSK6-218ENST00000619160 U2AF2P26368 475 aaKnown RBP eCLIP27.66■■■□□ 2.022e-6■■■□□ 14.8
PCSK6-218ENST00000619160 NECAB1Q8N987 351 aa27.66■■■□□ 2.02
PCSK6-218ENST00000619160 BCL11BQ9C0K0 894 aaPredicted RBP27.66■■■□□ 2.02
PCSK6-218ENST00000619160 TCHHQ07283 1943 aa27.66■■■□□ 2.02
PCSK6-218ENST00000619160 AP5Z1O43299 807 aa27.66■■■□□ 2.02
PCSK6-218ENST00000619160 KIF1BPQ96EK5 621 aa27.66■■■□□ 2.02
PCSK6-218ENST00000619160 KCNJ4P48050 445 aa27.66■■■□□ 2.02
PCSK6-218ENST00000619160 PDRG1Q9NUG6 133 aa27.66■■■□□ 2.02
PCSK6-218ENST00000619160 AOX1Q06278 1338 aa27.65■■■□□ 2.02
PCSK6-218ENST00000619160 RAB11FIP3O75154 756 aa27.65■■■□□ 2.02
PCSK6-218ENST00000619160 NBPF7P0C2Y1 421 aaPredicted RBP27.65■■■□□ 2.02
PCSK6-218ENST00000619160 ADCK5Q3MIX3 580 aa27.64■■■□□ 2.02
PCSK6-218ENST00000619160 NGDNQ8NEJ9 315 aaKnown RBP27.64■■■□□ 2.02
PCSK6-218ENST00000619160 FAM173BQ6P4H8 233 aa27.64■■■□□ 2.01
PCSK6-218ENST00000619160 ROBO2Q9HCK4 1378 aa27.63■■■□□ 2.01
PCSK6-218ENST00000619160 ARHGEF10O15013 1369 aa27.63■■■□□ 2.01
PCSK6-218ENST00000619160 PDCL2Q8N4E4 241 aa27.63■■■□□ 2.01
PCSK6-218ENST00000619160 MTMR6Q9Y217 621 aa27.63■■■□□ 2.01
PCSK6-218ENST00000619160 CCDC192P0DO97 292 aa27.62■■■□□ 2.01
PCSK6-218ENST00000619160 HYPKQ9NX55 129 aa27.62■■■□□ 2.01
PCSK6-218ENST00000619160 RIMBP3CA6NJZ7 1639 aa27.62■■■□□ 2.01
PCSK6-218ENST00000619160 RIMBP3BA6NNM3 1639 aa27.62■■■□□ 2.01
PCSK6-218ENST00000619160 RIMBP3Q9UFD9 1639 aa27.62■■■□□ 2.01
PCSK6-218ENST00000619160 ZBTB22O15209 634 aa27.62■■■□□ 2.01
PCSK6-218ENST00000619160 PTH1RQ03431 593 aa27.62■■■□□ 2.01
PCSK6-218ENST00000619160 DRC7Q8IY82 874 aa27.62■■■□□ 2.01
PCSK6-218ENST00000619160 IL17RAQ96F46 866 aa27.61■■■□□ 2.01
PCSK6-218ENST00000619160 KCNF1Q9H3M0 494 aa27.61■■■□□ 2.01
PCSK6-218ENST00000619160 SPTLC3Q9NUV7 552 aa27.61■■■□□ 2.01
PCSK6-218ENST00000619160 OVOS2A0A0J9YW53 1432 aa27.61■■■□□ 2.01
PCSK6-218ENST00000619160 OVOS2Q6IE36 1432 aa27.61■■■□□ 2.01
PCSK6-218ENST00000619160 ANXA1P04083 346 aa27.61■■■□□ 2.01
PCSK6-218ENST00000619160 GTF2E1P29083 439 aaPredicted RBP27.61■■■□□ 2.01
PCSK6-218ENST00000619160 HDGFP51858 240 aaKnown RBP27.61■■■□□ 2.01
PCSK6-218ENST00000619160 IL17REQ8NFR9 667 aa27.61■■■□□ 2.01
PCSK6-218ENST00000619160 CYP46A1Q9Y6A2 500 aa27.61■■■□□ 2.01
PCSK6-218ENST00000619160 GOLGA6L6A8MZA4 724 aa27.61■■■□□ 2.01
PCSK6-218ENST00000619160 GTPBP4Q9BZE4 634 aaKnown RBP27.61■■■□□ 2.01
PCSK6-218ENST00000619160 TAF7Q15545 349 aaPredicted RBP27.6■■■□□ 2.01
PCSK6-218ENST00000619160 CKAP2LQ8IYA6 745 aa27.6■■■□□ 2.01
PCSK6-218ENST00000619160 KIAA1524Q8TCG1 905 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms