RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	FAM210A	Q96ND0	272 aa		5.1	□□□□□ -1.59
UBE2D3-233	ENST00000618836	STK10	O94804	968 aa	Known RBP	5.1	□□□□□ -1.59
UBE2D3-233	ENST00000618836	VDR	P11473	427 aa		5.1	□□□□□ -1.59
UBE2D3-233	ENST00000618836	HDLBP	Q00341	1268 aa	Known RBP	5.1	□□□□□ -1.59
UBE2D3-233	ENST00000618836	PPP1R15B	Q5SWA1	713 aa		5.1	□□□□□ -1.59
UBE2D3-233	ENST00000618836	FMN1	Q68DA7	1419 aa		5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	GRXCR2	A6NFK2	248 aa		5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	PPP1R15A	O75807	674 aa	Predicted RBP	5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	KIF20A	O95235	890 aa		5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	MS4A1	P11836	297 aa		5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	CCDC102A	Q96A19	550 aa		5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	CDHR5	Q9HBB8	845 aa		5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	RBM28	Q9NW13	759 aa	Known RBP	5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	QRICH2	Q9H0J4	1663 aa		5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	CFAP65	Q6ZU64	1925 aa	Known RBP	5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	ASXL1	Q8IXJ9	1541 aa		5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	CD44	P16070	742 aa	Known RBP	5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	HSPA6	P17066	643 aa		5.09	□□□□□ -1.59
UBE2D3-233	ENST00000618836	ARHGAP35	Q9NRY4	1499 aa		5.09	□□□□□ -1.6
UBE2D3-233	ENST00000618836	CBFA2T2	O43439	604 aa		5.09	□□□□□ -1.6
UBE2D3-233	ENST00000618836	NLRP6	P59044	892 aa		5.09	□□□□□ -1.6
UBE2D3-233	ENST00000618836	ZC3H12A	Q5D1E8	599 aa	Known RBP	5.09	□□□□□ -1.6
UBE2D3-233	ENST00000618836	HDGFL1	Q5TGJ6	251 aa		5.09	□□□□□ -1.6
UBE2D3-233	ENST00000618836	CHRDL2	Q6WN34	429 aa		5.09	□□□□□ -1.6
UBE2D3-233	ENST00000618836	POM121	Q96HA1	1249 aa		5.09	□□□□□ -1.6
UBE2D3-233	ENST00000618836	PLCH2	O75038	1416 aa		5.09	□□□□□ -1.6
UBE2D3-233	ENST00000618836	PREX2	Q70Z35	1606 aa		5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	EVA1C	P58658	441 aa		5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	ZC3H6	P61129	1189 aa	Known RBP	5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	GJC2	Q5T442	439 aa	Predicted RBP	5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	EGFLAM	Q63HQ2	1017 aa		5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	RANBP17	Q9H2T7	1088 aa	Known RBP	5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	BMP2K	Q9NSY1	1161 aa	Predicted RBP	5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	MRVI1	Q9Y6F6	885 aa		5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	CDC42BPB	Q9Y5S2	1711 aa		5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	DMTN	Q08495	405 aa		5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	DPH6	Q7L8W6	267 aa		5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	AK7	Q96M32	723 aa		5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	INO80B	Q9C086	356 aa	Predicted RBP	5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	CHPF2	Q9P2E5	772 aa		5.08	□□□□□ -1.6
UBE2D3-233	ENST00000618836	C2orf72	A6NCS6	295 aa		5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	KCNB2	Q92953	911 aa		5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	AGBL1	Q96MI9	1066 aa		5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	CWC25	Q9NXE8	425 aa	Predicted RBP	5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	BICDL2	A1A5D9	508 aa		5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	IPO8	O15397	1037 aa	Known RBP	5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	DDRGK1	Q96HY6	314 aa		5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	TRIM35	Q9UPQ4	493 aa		5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	EHBP1L1	Q8N3D4	1523 aa		5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	MCM6	Q14566	821 aa		5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	NOP9	Q86U38	636 aa	Known RBP	5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	ANAPC4	Q9UJX5	808 aa		5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
UBE2D3-233	ENST00000618836	SYCP2	Q9BX26	1530 aa		5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	PPP1R12A	O14974	1030 aa	Predicted RBP	5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	WDHD1	O75717	1129 aa	Predicted RBP	5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	XPC	Q01831	940 aa	Predicted RBP	5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	PDIA6	Q15084	440 aa		5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	SF3A1	Q15459	793 aa	Known RBP	5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	ARPC5L	Q9BPX5	153 aa		5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	FAM13B	Q9NYF5	915 aa		5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	GIGYF1	O75420	1035 aa	Predicted RBP	5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	PSMC1	P62191	440 aa	Known RBP	5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	RASSF7	Q02833	373 aa		5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	SKIV2L	Q15477	1246 aa	Known RBP	5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	BANK1	Q8NDB2	785 aa		5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	PUF60	Q9UHX1	559 aa	Known RBP	5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	SMAP	O00193	183 aa		5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	TGFB3	P10600	412 aa		5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	RPAIN	Q86UA6	219 aa		5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	MICALL2	Q8IY33	904 aa		5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	RSPH9	Q9H1X1	276 aa	Predicted RBP	5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	GPHN	Q9NQX3	736 aa	Predicted RBP	5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	SCIN	Q9Y6U3	715 aa		5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	IVNS1ABP	Q9Y6Y0	642 aa		5.06	□□□□□ -1.6
UBE2D3-233	ENST00000618836	IGHD	P01880	384 aa		5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	MAP3K20	Q9NYL2	800 aa	Known RBP	5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	STK26	Q9P289	416 aa		5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	GABBR1	Q9UBS5	961 aa		5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	PLCH1	Q4KWH8	1693 aa		5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	ZMYM3	Q14202	1370 aa		5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	CT47B1	P0C2W7	299 aa	Predicted RBP	5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	OSBP	P22059	807 aa		5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	ANKRD13B	Q86YJ7	626 aa		5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	C1orf131	Q8NDD1	294 aa	Known RBP	5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	ENOX1	Q8TC92	643 aa	Known RBP	5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	SPACA7	Q96KW9	195 aa		5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	NBPF3	Q9H094	633 aa		5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	TULP4	Q9NRJ4	1543 aa		5.05	□□□□□ -1.6
UBE2D3-233	ENST00000618836	GOLGA6L3	A6NEY3	463 aa		5.04	□□□□□ -1.6
UBE2D3-233	ENST00000618836	HSP90AB2P	Q58FF8	381 aa		5.04	□□□□□ -1.6
UBE2D3-233	ENST00000618836	SEZ6L	Q9BYH1	1024 aa		5.04	□□□□□ -1.6
UBE2D3-233	ENST00000618836	BRINP2	Q9C0B6	783 aa		5.04	□□□□□ -1.6
UBE2D3-233	ENST00000618836	PAPPA	Q13219	1627 aa		5.04	□□□□□ -1.6
UBE2D3-233	ENST00000618836	MEGF6	O75095	1541 aa		5.04	□□□□□ -1.6
UBE2D3-233	ENST00000618836	TLDC2	A0PJX2	215 aa		5.04	□□□□□ -1.6
UBE2D3-233	ENST00000618836	FLT3	P36888	993 aa		5.04	□□□□□ -1.6
UBE2D3-233	ENST00000618836	EIF5	P55010	431 aa	Known RBP	5.04	□□□□□ -1.6
UBE2D3-233	ENST00000618836	PTPRO	Q16827	1216 aa		5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms