RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 POTEDQ86YR6 584 aa18.97■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CCDC114Q96M63 670 aa18.97■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CPLX3Q8WVH0 158 aa18.97■□□□□ 0.63
CNTNAP3B-214ENST00000618777 RBM27Q9P2N5 1060 aaKnown RBP18.97■□□□□ 0.63
CNTNAP3B-214ENST00000618777 GCKP35557 465 aa18.97■□□□□ 0.63
CNTNAP3B-214ENST00000618777 DNAI1Q9UI46 699 aa18.97■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CCDC160A6NGH7 325 aa18.96■□□□□ 0.63
CNTNAP3B-214ENST00000618777 DESP17661 470 aa18.96■□□□□ 0.63
CNTNAP3B-214ENST00000618777 HOOK3Q86VS8 718 aa18.96■□□□□ 0.63
CNTNAP3B-214ENST00000618777 TUBBP07437 444 aa18.96■□□□□ 0.63
CNTNAP3B-214ENST00000618777 RBBP5Q15291 538 aaKnown RBP18.96■□□□□ 0.63
CNTNAP3B-214ENST00000618777 FSD2A1L4K1 749 aa18.95■□□□□ 0.62
CNTNAP3B-214ENST00000618777 CCDC186Q7Z3E2 898 aa18.95■□□□□ 0.62
CNTNAP3B-214ENST00000618777 MAP4K4O95819 1239 aaPredicted RBP18.95■□□□□ 0.62
CNTNAP3B-214ENST00000618777 TBC1D32Q96NH3 1257 aa18.95■□□□□ 0.62
CNTNAP3B-214ENST00000618777 GGNBP2Q9H3C7 697 aa18.95■□□□□ 0.62
CNTNAP3B-214ENST00000618777 LIMCH1Q9UPQ0 1083 aa18.95■□□□□ 0.62
CNTNAP3B-214ENST00000618777 SCAPERQ9BY12 1400 aa18.95■□□□□ 0.62
CNTNAP3B-214ENST00000618777 SOGA3Q5TF21 947 aa18.95■□□□□ 0.62
CNTNAP3B-214ENST00000618777 GOLGA1Q92805 767 aa18.95■□□□□ 0.62
CNTNAP3B-214ENST00000618777 FGFR1OPO95684 399 aaKnown RBP18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 SLC4A2P04920 1241 aa18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 DDX46Q7L014 1031 aaKnown RBP18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 PPP1R12BO60237 982 aaPredicted RBP18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 POTEJP0CG39 1038 aa18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 JADE2Q9NQC1 790 aa18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 IKQ13123 557 aaPredicted RBP18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 CNPY4Q8N129 248 aa18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 KLHL34Q8N239 644 aa18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 CCDC155Q8N6L0 562 aa18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 PSMD1Q99460 953 aa18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 DHX29Q7Z478 1369 aaKnown RBP18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 DNA2P51530 1060 aa18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 FSIP1Q8NA03 581 aa18.94■□□□□ 0.62
CNTNAP3B-214ENST00000618777 PRKAR2BP31323 418 aa18.93■□□□□ 0.62
CNTNAP3B-214ENST00000618777 DNAJC21Q5F1R6 531 aaKnown RBP18.93■□□□□ 0.62
CNTNAP3B-214ENST00000618777 TTC39AQ5SRH9 613 aa18.93■□□□□ 0.62
CNTNAP3B-214ENST00000618777 SSBP05455 408 aaKnown RBP eCLIP18.93■□□□□ 0.62
CNTNAP3B-214ENST00000618777 SKAP1Q86WV1 359 aa18.93■□□□□ 0.62
CNTNAP3B-214ENST00000618777 ARFGAP2Q8N6H7 521 aa18.93■□□□□ 0.62
CNTNAP3B-214ENST00000618777 SLFN5Q08AF3 891 aa18.93■□□□□ 0.62
CNTNAP3B-214ENST00000618777 TMEM132AQ24JP5 1023 aa18.93■□□□□ 0.62
CNTNAP3B-214ENST00000618777 FAM200AQ8TCP9 573 aa18.93■□□□□ 0.62
CNTNAP3B-214ENST00000618777 GDPD2Q9HCC8 539 aa18.93■□□□□ 0.62
CNTNAP3B-214ENST00000618777 TDRD12Q587J7 1177 aaKnown RBP18.92■□□□□ 0.62
CNTNAP3B-214ENST00000618777 ZSCAN25Q6NSZ9 544 aa18.92■□□□□ 0.62
CNTNAP3B-214ENST00000618777 GAS2L2Q8NHY3 880 aa18.92■□□□□ 0.62
CNTNAP3B-214ENST00000618777 SPATS2LQ9NUQ6 558 aaKnown RBP18.92■□□□□ 0.62
CNTNAP3B-214ENST00000618777 CCDC172P0C7W6 258 aa18.92■□□□□ 0.62
CNTNAP3B-214ENST00000618777 INPP5BP32019 993 aa18.92■□□□□ 0.62
CNTNAP3B-214ENST00000618777 STX6O43752 255 aa18.91■□□□□ 0.62
CNTNAP3B-214ENST00000618777 LARP1Q6PKG0 1096 aaKnown RBP18.91■□□□□ 0.62
CNTNAP3B-214ENST00000618777 CNNM3Q8NE01 707 aa18.91■□□□□ 0.62
CNTNAP3B-214ENST00000618777 MIPOL1Q8TD10 442 aa18.91■□□□□ 0.62
CNTNAP3B-214ENST00000618777 ERO1AQ96HE7 468 aa18.91■□□□□ 0.62
CNTNAP3B-214ENST00000618777 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
CNTNAP3B-214ENST00000618777 RRBP1Q9P2E9 1410 aaKnown RBP18.91■□□□□ 0.62
CNTNAP3B-214ENST00000618777 TSG101Q99816 390 aa18.91■□□□□ 0.62
CNTNAP3B-214ENST00000618777 ZFYP08048 801 aaPredicted RBP18.91■□□□□ 0.62
CNTNAP3B-214ENST00000618777 WWC2Q6AWC2 1192 aa18.91■□□□□ 0.62
CNTNAP3B-214ENST00000618777 KIF4AO95239 1232 aa18.9■□□□□ 0.62
CNTNAP3B-214ENST00000618777 PIP4K2BP78356 416 aa18.9■□□□□ 0.62
CNTNAP3B-214ENST00000618777 PPP2R5AQ15172 486 aa18.9■□□□□ 0.62
CNTNAP3B-214ENST00000618777 SAMD1Q6SPF0 538 aaPredicted RBP18.9■□□□□ 0.62
CNTNAP3B-214ENST00000618777 CCDC50Q8IVM0 306 aa18.9■□□□□ 0.62
CNTNAP3B-214ENST00000618777 PHAXQ9H814 394 aaKnown RBP18.9■□□□□ 0.62
CNTNAP3B-214ENST00000618777 ZSCAN26Q16670 478 aa18.9■□□□□ 0.62
CNTNAP3B-214ENST00000618777 TCHPQ9BT92 498 aa18.9■□□□□ 0.62
CNTNAP3B-214ENST00000618777 MATR3P43243 847 aaKnown RBP eCLIP18.9■□□□□ 0.62
CNTNAP3B-214ENST00000618777 AACSQ86V21 672 aa18.89■□□□□ 0.61
CNTNAP3B-214ENST00000618777 DZIP1Q86YF9 867 aaKnown RBP18.89■□□□□ 0.61
CNTNAP3B-214ENST00000618777 DDX12PQ92771 950 aa18.89■□□□□ 0.61
CNTNAP3B-214ENST00000618777 NAP1L3Q99457 506 aaPredicted RBP18.89■□□□□ 0.61
CNTNAP3B-214ENST00000618777 RIOK3O14730 519 aaKnown RBP18.89■□□□□ 0.61
CNTNAP3B-214ENST00000618777 C8orf76Q96K31 380 aa18.89■□□□□ 0.61
CNTNAP3B-214ENST00000618777 TTC14Q96N46 770 aa18.89■□□□□ 0.61
CNTNAP3B-214ENST00000618777 FAM184BQ9ULE4 1060 aa18.89■□□□□ 0.61
CNTNAP3B-214ENST00000618777 KIF3CO14782 793 aa18.88■□□□□ 0.61
CNTNAP3B-214ENST00000618777 ANAPC15P60006 121 aa18.88■□□□□ 0.61
CNTNAP3B-214ENST00000618777 STMN4Q9H169 189 aaPredicted RBP18.88■□□□□ 0.61
CNTNAP3B-214ENST00000618777 CCDC184Q52MB2 194 aa18.88■□□□□ 0.61
CNTNAP3B-214ENST00000618777 B4GALNT4Q76KP1 1039 aa18.88■□□□□ 0.61
CNTNAP3B-214ENST00000618777 PRIM1P49642 420 aaKnown RBP18.88■□□□□ 0.61
CNTNAP3B-214ENST00000618777 TMEM57Q8N5G2 664 aa18.88■□□□□ 0.61
CNTNAP3B-214ENST00000618777 FEZ2Q9UHY8 353 aaPredicted RBP18.88■□□□□ 0.61
CNTNAP3B-214ENST00000618777 GIMAP6Q6P9H5 292 aa18.88■□□□□ 0.61
CNTNAP3B-214ENST00000618777 UBAC1Q9BSL1 405 aa18.88■□□□□ 0.61
CNTNAP3B-214ENST00000618777 PRPF40BQ6NWY9 871 aaKnown RBP18.87■□□□□ 0.61
CNTNAP3B-214ENST00000618777 MKRN1Q9UHC7 482 aaKnown RBP18.87■□□□□ 0.61
CNTNAP3B-214ENST00000618777 MX1P20591 662 aa18.87■□□□□ 0.61
CNTNAP3B-214ENST00000618777 HOMER2Q9NSB8 354 aa18.87■□□□□ 0.61
CNTNAP3B-214ENST00000618777 STIM2Q9P246 746 aa18.87■□□□□ 0.61
CNTNAP3B-214ENST00000618777 FAM76AQ8TAV0 307 aa18.87■□□□□ 0.61
CNTNAP3B-214ENST00000618777 CTNNBL1Q8WYA6 563 aaPredicted RBP18.87■□□□□ 0.61
CNTNAP3B-214ENST00000618777 LACTBP83111 547 aaPredicted RBP18.87■□□□□ 0.61
CNTNAP3B-214ENST00000618777 LMNTD2Q8IXW0 634 aa18.87■□□□□ 0.61
CNTNAP3B-214ENST00000618777 PPFIBP2Q8ND30 876 aa18.87■□□□□ 0.61
CNTNAP3B-214ENST00000618777 CTCFLQ8NI51 663 aaPredicted RBP18.87■□□□□ 0.61
CNTNAP3B-214ENST00000618777 SRGAP3O43295 1099 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms