RNA–Protein interactions for RNA: ENST00000618511.4

RDM1-222, Transcript of RAD52 motif containing 1, human

TSL 1 (best)

Gene RDM1, Length 518 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDM1-222	ENST00000618511	ZBTB7A	O95365	584 aa		7.94	□□□□□ -1.14
RDM1-222	ENST00000618511	ZNF530	Q6P9A1	599 aa	Predicted RBP	7.94	□□□□□ -1.14
RDM1-222	ENST00000618511	MPRIP	Q6WCQ1	1025 aa		7.94	□□□□□ -1.14
RDM1-222	ENST00000618511	ARX	Q96QS3	562 aa		7.94	□□□□□ -1.14
RDM1-222	ENST00000618511	OCEL1	Q9H607	264 aa		7.94	□□□□□ -1.14
RDM1-222	ENST00000618511	C5	P01031	1676 aa		7.94	□□□□□ -1.14
RDM1-222	ENST00000618511	CEMIP	Q8WUJ3	1361 aa		7.94	□□□□□ -1.14
RDM1-222	ENST00000618511	C1orf141	Q5JVX7	400 aa		7.93	□□□□□ -1.14
RDM1-222	ENST00000618511	COL23A1	Q86Y22	540 aa	Predicted RBP	7.93	□□□□□ -1.14
RDM1-222	ENST00000618511	VSIG10	Q8N0Z9	540 aa		7.93	□□□□□ -1.14
RDM1-222	ENST00000618511	SYT17	Q9BSW7	474 aa		7.93	□□□□□ -1.14
RDM1-222	ENST00000618511	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.93	□□□□□ -1.14
RDM1-222	ENST00000618511	ASAP1	Q9ULH1	1129 aa		7.93	□□□□□ -1.14
RDM1-222	ENST00000618511	RGPD2	P0DJD1	1756 aa		7.92	□□□□□ -1.14
RDM1-222	ENST00000618511	MAP2	P11137	1827 aa	Known RBP	7.92	□□□□□ -1.14
RDM1-222	ENST00000618511	POLD1	P28340	1107 aa		7.92	□□□□□ -1.14
RDM1-222	ENST00000618511	PSEN1	P49768	467 aa		7.92	□□□□□ -1.14
RDM1-222	ENST00000618511	ITPK1	Q13572	414 aa		7.92	□□□□□ -1.14
RDM1-222	ENST00000618511	LINC00116	Q8NCU8	138 aa		7.92	□□□□□ -1.14
RDM1-222	ENST00000618511	GAS2L2	Q8NHY3	880 aa		7.92	□□□□□ -1.14
RDM1-222	ENST00000618511	SLC4A9	Q96Q91	983 aa		7.92	□□□□□ -1.14
RDM1-222	ENST00000618511	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.92	□□□□□ -1.14
RDM1-222	ENST00000618511	SLC52A2	Q9HAB3	445 aa		7.92	□□□□□ -1.14
RDM1-222	ENST00000618511	CD2AP	Q9Y5K6	639 aa		7.92	□□□□□ -1.14
RDM1-222	ENST00000618511	FCHSD2	O94868	740 aa		7.91	□□□□□ -1.14
RDM1-222	ENST00000618511	PPP2R1A	P30153	589 aa		7.91	□□□□□ -1.14
RDM1-222	ENST00000618511	CABP4	P57796	275 aa		7.91	□□□□□ -1.14
RDM1-222	ENST00000618511	CC2D1B	Q5T0F9	858 aa	Known RBP	7.91	□□□□□ -1.14
RDM1-222	ENST00000618511	LCE2D	Q5TA82	110 aa	Predicted RBP	7.91	□□□□□ -1.14
RDM1-222	ENST00000618511	AK7	Q96M32	723 aa		7.91	□□□□□ -1.14
RDM1-222	ENST00000618511	CFAP53	Q96M91	514 aa		7.91	□□□□□ -1.14
RDM1-222	ENST00000618511	RTN4	Q9NQC3	1192 aa	Known RBP	7.91	□□□□□ -1.14
RDM1-222	ENST00000618511	C4B	P0C0L5	1744 aa		7.91	□□□□□ -1.14
RDM1-222	ENST00000618511	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	7.9	□□□□□ -1.14
RDM1-222	ENST00000618511	RGL2	O15211	777 aa		7.9	□□□□□ -1.14
RDM1-222	ENST00000618511	RNMT	O43148	476 aa	Known RBP	7.9	□□□□□ -1.14
RDM1-222	ENST00000618511	HTATSF1	O43719	755 aa	Known RBP	7.9	□□□□□ -1.14
RDM1-222	ENST00000618511	RPS6KA4	O75676	772 aa		7.9	□□□□□ -1.14
RDM1-222	ENST00000618511	MTHFSD	Q2M296	383 aa	Known RBP	7.9	□□□□□ -1.14
RDM1-222	ENST00000618511	AMIGO3	Q86WK7	504 aa		7.9	□□□□□ -1.14
RDM1-222	ENST00000618511	SLAIN1	Q8ND83	568 aa		7.9	□□□□□ -1.14
RDM1-222	ENST00000618511	RSPH6A	Q9H0K4	717 aa		7.9	□□□□□ -1.14
RDM1-222	ENST00000618511	PLSCR2	Q9NRY7	297 aa		7.9	□□□□□ -1.14
RDM1-222	ENST00000618511	ATP6V1A	P38606	617 aa		7.89	□□□□□ -1.15
RDM1-222	ENST00000618511	KCNQ4	P56696	695 aa		7.89	□□□□□ -1.15
RDM1-222	ENST00000618511	GOLGA2	Q08379	1002 aa		7.89	□□□□□ -1.15
RDM1-222	ENST00000618511	NUDC	Q9Y266	331 aa		7.89	□□□□□ -1.15
RDM1-222	ENST00000618511	KCP	Q6ZWJ8	1503 aa		7.88	□□□□□ -1.15
RDM1-222	ENST00000618511	UTRN	P46939	3433 aa		7.88	□□□□□ -1.15
RDM1-222	ENST00000618511	GNAT3	A8MTJ3	354 aa		7.88	□□□□□ -1.15
RDM1-222	ENST00000618511	MKRN3	Q13064	507 aa	Known RBP	7.88	□□□□□ -1.15
RDM1-222	ENST00000618511	NLGN1	Q8N2Q7	840 aa		7.88	□□□□□ -1.15
RDM1-222	ENST00000618511	NFATC2IP	Q8NCF5	419 aa		7.88	□□□□□ -1.15
RDM1-222	ENST00000618511	RTCB	Q9Y3I0	505 aa	Known RBP	7.88	□□□□□ -1.15
RDM1-222	ENST00000618511	C10orf71	Q711Q0	1435 aa		7.87	□□□□□ -1.15
RDM1-222	ENST00000618511	GNPAT	O15228	680 aa		7.87	□□□□□ -1.15
RDM1-222	ENST00000618511	HMOX1	P09601	288 aa		7.87	□□□□□ -1.15
RDM1-222	ENST00000618511	PDAP1	Q13442	181 aa	Known RBP	7.87	□□□□□ -1.15
RDM1-222	ENST00000618511	RALBP1	Q15311	655 aa		7.87	□□□□□ -1.15
RDM1-222	ENST00000618511	INTS5	Q6P9B9	1019 aa	Known RBP	7.87	□□□□□ -1.15
RDM1-222	ENST00000618511	IL17RE	Q8NFR9	667 aa		7.87	□□□□□ -1.15
RDM1-222	ENST00000618511	SOS1	Q07889	1333 aa	Predicted RBP	7.86	□□□□□ -1.15
RDM1-222	ENST00000618511	USP42	Q9H9J4	1324 aa	Known RBP	7.86	□□□□□ -1.15
RDM1-222	ENST00000618511	CYP19A1	P11511	503 aa	Predicted RBP	7.86	□□□□□ -1.15
RDM1-222	ENST00000618511	GYS1	P13807	737 aa		7.86	□□□□□ -1.15
RDM1-222	ENST00000618511	PRKAR2B	P31323	418 aa		7.86	□□□□□ -1.15
RDM1-222	ENST00000618511	CRKL	P46109	303 aa	Known RBP	7.86	□□□□□ -1.15
RDM1-222	ENST00000618511	ARHGEF1	Q92888	912 aa	Known RBP	7.86	□□□□□ -1.15
RDM1-222	ENST00000618511	TEX13A	Q9BXU3	409 aa	Predicted RBP	7.86	□□□□□ -1.15
RDM1-222	ENST00000618511	LGR6	Q9HBX8	967 aa		7.86	□□□□□ -1.15
RDM1-222	ENST00000618511	GRIN3B	O60391	1043 aa		7.85	□□□□□ -1.15
RDM1-222	ENST00000618511	TGFB2	P61812	414 aa		7.85	□□□□□ -1.15
RDM1-222	ENST00000618511	TRAPPC3L	Q5T215	181 aa		7.85	□□□□□ -1.15
RDM1-222	ENST00000618511	ZNF790	Q6PG37	636 aa		7.85	□□□□□ -1.15
RDM1-222	ENST00000618511	PDCD7	Q8N8D1	485 aa	Known RBP	7.85	□□□□□ -1.15
RDM1-222	ENST00000618511	PLEKHF1	Q96S99	279 aa		7.85	□□□□□ -1.15
RDM1-222	ENST00000618511	CCDC87	Q9NVE4	849 aa		7.85	□□□□□ -1.15
RDM1-222	ENST00000618511	UBR3	Q6ZT12	1888 aa		7.85	□□□□□ -1.15
RDM1-222	ENST00000618511	KAT6B	Q8WYB5	2073 aa		7.85	□□□□□ -1.15
RDM1-222	ENST00000618511	ITGB4	P16144	1822 aa		7.85	□□□□□ -1.15
RDM1-222	ENST00000618511	TAF1L	Q8IZX4	1826 aa		7.85	□□□□□ -1.15
RDM1-222	ENST00000618511	TUBGCP6	Q96RT7	1819 aa		7.85	□□□□□ -1.15
RDM1-222	ENST00000618511	HEG1	Q9ULI3	1381 aa		7.84	□□□□□ -1.15
RDM1-222	ENST00000618511	COL5A3	P25940	1745 aa	Predicted RBP	7.84	□□□□□ -1.15
RDM1-222	ENST00000618511	U2SURP	O15042	1029 aa	Known RBP	7.84	□□□□□ -1.15
RDM1-222	ENST00000618511	PTCD1	O75127	700 aa	Known RBP	7.84	□□□□□ -1.15
RDM1-222	ENST00000618511	EIF5	P55010	431 aa	Known RBP	7.84	□□□□□ -1.15
RDM1-222	ENST00000618511	PHACTR3	Q96KR7	559 aa		7.84	□□□□□ -1.15
RDM1-222	ENST00000618511	PNN	Q9H307	717 aa	Known RBP	7.84	□□□□□ -1.15
RDM1-222	ENST00000618511	BABAM1	Q9NWV8	329 aa		7.84	□□□□□ -1.15
RDM1-222	ENST00000618511	ADCY9	O60503	1353 aa		7.84	□□□□□ -1.16
RDM1-222	ENST00000618511	STARD3NL	O95772	234 aa		7.83	□□□□□ -1.16
RDM1-222	ENST00000618511	U2AF1L5	P0DN76	240 aa	Predicted RBP	7.83	□□□□□ -1.16
RDM1-222	ENST00000618511	YY1	P25490	414 aa		7.83	□□□□□ -1.16
RDM1-222	ENST00000618511	TM4SF1	P30408	202 aa		7.83	□□□□□ -1.16
RDM1-222	ENST00000618511	U2AF1	Q01081	240 aa	Known RBP eCLIP	7.83	□□□□□ -1.16
RDM1-222	ENST00000618511	TEF	Q10587	303 aa		7.83	□□□□□ -1.16
RDM1-222	ENST00000618511	NLGN2	Q8NFZ4	835 aa		7.83	□□□□□ -1.16
RDM1-222	ENST00000618511	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	7.83	□□□□□ -1.16
RDM1-222	ENST00000618511	NARF	Q9UHQ1	456 aa		7.83	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms