RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 GSE1Q14687 1217 aa15.26■□□□□ 0.03
CIITA-212ENST00000618207 STRN4Q9NRL3 753 aa15.26■□□□□ 0.03
CIITA-212ENST00000618207 SPG7Q9UQ90 795 aa15.26■□□□□ 0.03
CIITA-212ENST00000618207 LMO7Q8WWI1 1683 aa15.26■□□□□ 0.03
CIITA-212ENST00000618207 MEGF6O75095 1541 aa15.26■□□□□ 0.03
CIITA-212ENST00000618207 CYP27B1O15528 508 aa15.26■□□□□ 0.03
CIITA-212ENST00000618207 HOXB7P09629 217 aa15.26■□□□□ 0.03
CIITA-212ENST00000618207 UNC5CLQ8IV45 518 aa15.26■□□□□ 0.03
CIITA-212ENST00000618207 ZNF496Q96IT1 587 aaPredicted RBP15.26■□□□□ 0.03
CIITA-212ENST00000618207 KIF1AQ12756 1690 aa15.26■□□□□ 0.03
CIITA-212ENST00000618207 SPATA31A3Q5VYP0 1347 aa15.26■□□□□ 0.03
CIITA-212ENST00000618207 TOM1L2Q6ZVM7 507 aa15.25■□□□□ 0.03
CIITA-212ENST00000618207 SLC52A2Q9HAB3 445 aa15.25■□□□□ 0.03
CIITA-212ENST00000618207 PA2G4Q9UQ80 394 aaKnown RBP15.25■□□□□ 0.03
CIITA-212ENST00000618207 KDM3BQ7LBC6 1761 aa15.25■□□□□ 0.03
CIITA-212ENST00000618207 KAT6BQ8WYB5 2073 aa15.25■□□□□ 0.03
CIITA-212ENST00000618207 IFNL2Q8IZJ0 200 aa15.25■□□□□ 0.03
CIITA-212ENST00000618207 USP26Q9BXU7 913 aa15.25■□□□□ 0.03
CIITA-212ENST00000618207 USP16Q9Y5T5 823 aa15.25■□□□□ 0.03
CIITA-212ENST00000618207 IBTKQ9P2D0 1353 aaPredicted RBP15.25■□□□□ 0.03
CIITA-212ENST00000618207 ALS2Q96Q42 1657 aa15.25■□□□□ 0.03
CIITA-212ENST00000618207 RIC3Q7Z5B4 369 aa15.25■□□□□ 0.03
CIITA-212ENST00000618207 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.25■□□□□ 0.03
CIITA-212ENST00000618207 PHRF1Q9P1Y6 1649 aaKnown RBP15.24■□□□□ 0.03
CIITA-212ENST00000618207 TTC5Q8N0Z6 440 aa15.24■□□□□ 0.03
CIITA-212ENST00000618207 SSH3Q8TE77 659 aa15.24■□□□□ 0.03
CIITA-212ENST00000618207 TNS3Q68CZ2 1445 aa15.24■□□□□ 0.03
CIITA-212ENST00000618207 KSR2Q6VAB6 950 aa15.24■□□□□ 0.03
CIITA-212ENST00000618207 RHPN1Q8TCX5 695 aa15.23■□□□□ 0.03
CIITA-212ENST00000618207 CHMP5Q9NZZ3 219 aa15.23■□□□□ 0.03
CIITA-212ENST00000618207 KDM6AO15550 1401 aaPredicted RBP15.23■□□□□ 0.03
CIITA-212ENST00000618207 DDX54Q8TDD1 881 aaKnown RBP15.23■□□□□ 0.03
CIITA-212ENST00000618207 SLAIN2Q9P270 581 aa15.23■□□□□ 0.03
CIITA-212ENST00000618207 COPS6Q7L5N1 327 aa15.22■□□□□ 0.03
CIITA-212ENST00000618207 GZF1Q9H116 711 aaPredicted RBP15.22■□□□□ 0.03
CIITA-212ENST00000618207 CABP4P57796 275 aa15.22■□□□□ 0.03
CIITA-212ENST00000618207 XAGE3Q8WTP9 111 aa15.22■□□□□ 0.03
CIITA-212ENST00000618207 KDM4FA0A1W2PPD8 638 aa15.21■□□□□ 0.03
CIITA-212ENST00000618207 K7ELQ4 463 aaPredicted RBP15.21■□□□□ 0.03
CIITA-212ENST00000618207 ERC2O15083 957 aa15.21■□□□□ 0.03
CIITA-212ENST00000618207 SIL1Q9H173 461 aa15.21■□□□□ 0.03
CIITA-212ENST00000618207 ANO2Q9NQ90 1003 aa15.21■□□□□ 0.03
CIITA-212ENST00000618207 DDX21Q9NR30 783 aaKnown RBP eCLIP15.21■□□□□ 0.03
CIITA-212ENST00000618207 HYPKQ9NX55 129 aa15.21■□□□□ 0.03
CIITA-212ENST00000618207 NCAPD2Q15021 1401 aa15.21■□□□□ 0.03
CIITA-212ENST00000618207 PDIA6Q15084 440 aa15.21■□□□□ 0.03
CIITA-212ENST00000618207 NOL8Q76FK4 1167 aaKnown RBP15.21■□□□□ 0.03
CIITA-212ENST00000618207 SNX21Q969T3 373 aa15.21■□□□□ 0.03
CIITA-212ENST00000618207 CHMP4AQ9BY43 222 aa15.21■□□□□ 0.03
CIITA-212ENST00000618207 KLHDC4Q8TBB5 520 aa15.21■□□□□ 0.02
CIITA-212ENST00000618207 OSBPL3Q9H4L5 887 aa15.21■□□□□ 0.02
CIITA-212ENST00000618207 AK9Q5TCS8 1911 aa15.2■□□□□ 0.02
CIITA-212ENST00000618207 REC8O95072 547 aa15.2■□□□□ 0.02
CIITA-212ENST00000618207 MYD88Q99836 296 aa15.2■□□□□ 0.02
CIITA-212ENST00000618207 SALL3Q9BXA9 1300 aa15.2■□□□□ 0.02
CIITA-212ENST00000618207 PTCD1O75127 700 aaKnown RBP15.2■□□□□ 0.02
CIITA-212ENST00000618207 SUCLG2Q96I99 432 aa15.2■□□□□ 0.02
CIITA-212ENST00000618207 PXDNLA1KZ92 1463 aa15.19■□□□□ 0.02
CIITA-212ENST00000618207 DDX58O95786 925 aaKnown RBP15.19■□□□□ 0.02
CIITA-212ENST00000618207 POLA2Q14181 598 aa15.19■□□□□ 0.02
CIITA-212ENST00000618207 ATP5J2-PTCD1G3V325 749 aa15.19■□□□□ 0.02
CIITA-212ENST00000618207 KIF1BPQ96EK5 621 aa15.19■□□□□ 0.02
CIITA-212ENST00000618207 DCAF5Q96JK2 942 aa15.19■□□□□ 0.02
CIITA-212ENST00000618207 IL25Q9H293 177 aa15.19■□□□□ 0.02
CIITA-212ENST00000618207 DCCP43146 1447 aa15.18■□□□□ 0.02
CIITA-212ENST00000618207 BICC1Q9H694 974 aaKnown RBP15.18■□□□□ 0.02
CIITA-212ENST00000618207 HEG1Q9ULI3 1381 aa15.18■□□□□ 0.02
CIITA-212ENST00000618207 GRM8O00222 908 aa15.18■□□□□ 0.02
CIITA-212ENST00000618207 EVA1CP58658 441 aa15.18■□□□□ 0.02
CIITA-212ENST00000618207 ZNF330Q9Y3S2 320 aaPredicted RBP15.18■□□□□ 0.02
CIITA-212ENST00000618207 IGKV5-2P06315 115 aa15.17■□□□□ 0.02
CIITA-212ENST00000618207 CHMLP26374 656 aa15.17■□□□□ 0.02
CIITA-212ENST00000618207 MCM4P33991 863 aa15.17■□□□□ 0.02
CIITA-212ENST00000618207 LINS1Q8NG48 757 aa15.17■□□□□ 0.02
CIITA-212ENST00000618207 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
CIITA-212ENST00000618207 RABEP1Q15276 862 aa15.17■□□□□ 0.02
CIITA-212ENST00000618207 NEXNQ0ZGT2 675 aa15.16■□□□□ 0.02
CIITA-212ENST00000618207 LARP1Q6PKG0 1096 aaKnown RBP15.16■□□□□ 0.02
CIITA-212ENST00000618207 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.16■□□□□ 0.02
CIITA-212ENST00000618207 RAB11FIP3O75154 756 aa15.16■□□□□ 0.02
CIITA-212ENST00000618207 SNRPA1P09661 255 aaKnown RBP15.16■□□□□ 0.02
CIITA-212ENST00000618207 FMNL2Q96PY5 1086 aa15.16■□□□□ 0.02
CIITA-212ENST00000618207 PALD1Q9ULE6 856 aa15.16■□□□□ 0.02
CIITA-212ENST00000618207 ALDH1L1O75891 902 aa15.16■□□□□ 0.02
CIITA-212ENST00000618207 ZCRB1Q8TBF4 217 aaKnown RBP15.16■□□□□ 0.02
CIITA-212ENST00000618207 TNPO1Q92973 898 aaKnown RBP15.16■□□□□ 0.02
CIITA-212ENST00000618207 KAZALD1Q96I82 304 aa15.16■□□□□ 0.02
CIITA-212ENST00000618207 XIRP1Q702N8 1843 aaKnown RBP15.15■□□□□ 0.02
CIITA-212ENST00000618207 COL18A1P39060 1754 aa15.15■□□□□ 0.02
CIITA-212ENST00000618207 NEK4P51957 841 aa15.15■□□□□ 0.02
CIITA-212ENST00000618207 ANKRD13DQ6ZTN6 518 aa15.15■□□□□ 0.02
CIITA-212ENST00000618207 CLASRPQ8N2M8 674 aaKnown RBP15.15■□□□□ 0.02
CIITA-212ENST00000618207 CCDC8Q9H0W5 538 aaPredicted RBP15.15■□□□□ 0.02
CIITA-212ENST00000618207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.15■□□□□ 0.02
CIITA-212ENST00000618207 SCN11AQ9UI33 1791 aa15.14■□□□□ 0.01
CIITA-212ENST00000618207 EPHA10Q5JZY3 1008 aa15.14■□□□□ 0.01
CIITA-212ENST00000618207 PI4K2BQ8TCG2 481 aa15.14■□□□□ 0.01
CIITA-212ENST00000618207 UPF3BQ9BZI7 483 aaKnown RBP15.14■□□□□ 0.01
CIITA-212ENST00000618207 STAP2Q9UGK3 403 aa15.14■□□□□ 0.01
CIITA-212ENST00000618207 CAMTA1Q9Y6Y1 1673 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms