RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 CPSF1Q10570 1443 aaKnown RBP10.4□□□□□ -0.75
SCAMP1-206ENST00000618166 NSD2O96028 1365 aa10.4□□□□□ -0.75
SCAMP1-206ENST00000618166 A0A0G2JLW4 131 aa10.39□□□□□ -0.75
SCAMP1-206ENST00000618166 HSPA8P11142 646 aaKnown RBP10.39□□□□□ -0.75
SCAMP1-206ENST00000618166 AIDAQ96BJ3 306 aa10.39□□□□□ -0.75
SCAMP1-206ENST00000618166 SYTL4Q96C24 671 aaPredicted RBP10.39□□□□□ -0.75
SCAMP1-206ENST00000618166 CFAP44Q96MT7 982 aa10.39□□□□□ -0.75
SCAMP1-206ENST00000618166 LY75O60449 1722 aa10.39□□□□□ -0.75
SCAMP1-206ENST00000618166 ADGRB1O14514 1584 aa10.39□□□□□ -0.75
SCAMP1-206ENST00000618166 USP54Q70EL1 1684 aa10.38□□□□□ -0.75
SCAMP1-206ENST00000618166 CCDC7Q96M83 1385 aa10.38□□□□□ -0.75
SCAMP1-206ENST00000618166 N4BP2Q86UW6 1770 aaPredicted RBP10.38□□□□□ -0.75
SCAMP1-206ENST00000618166 PRIM1P49642 420 aaKnown RBP10.38□□□□□ -0.75
SCAMP1-206ENST00000618166 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
SCAMP1-206ENST00000618166 IRX2Q9BZI1 471 aaPredicted RBP10.38□□□□□ -0.75
SCAMP1-206ENST00000618166 RNF181Q9P0P0 153 aa10.38□□□□□ -0.75
SCAMP1-206ENST00000618166 PPP4R3BQ5MIZ7 849 aa10.37□□□□□ -0.75
SCAMP1-206ENST00000618166 WBP1LQ9NX94 342 aa10.37□□□□□ -0.75
SCAMP1-206ENST00000618166 CNTNAP1P78357 1384 aa10.36□□□□□ -0.75
SCAMP1-206ENST00000618166 PLEKHG3A1L390 1219 aa10.36□□□□□ -0.75
SCAMP1-206ENST00000618166 FCHSD2O94868 740 aa10.36□□□□□ -0.75
SCAMP1-206ENST00000618166 VEGFBP49765 207 aa10.36□□□□□ -0.75
SCAMP1-206ENST00000618166 ARHGEF25Q86VW2 580 aa10.36□□□□□ -0.75
SCAMP1-206ENST00000618166 DDX54Q8TDD1 881 aaKnown RBP10.36□□□□□ -0.75
SCAMP1-206ENST00000618166 CDK19Q9BWU1 502 aa10.36□□□□□ -0.75
SCAMP1-206ENST00000618166 TOGARAM1Q9Y4F4 1720 aa10.35□□□□□ -0.75
SCAMP1-206ENST00000618166 STK25O00506 426 aa10.35□□□□□ -0.75
SCAMP1-206ENST00000618166 PHF14O94880 888 aa10.35□□□□□ -0.75
SCAMP1-206ENST00000618166 IL2RBP14784 551 aa10.35□□□□□ -0.75
SCAMP1-206ENST00000618166 DPEP1P16444 411 aa10.34□□□□□ -0.75
SCAMP1-206ENST00000618166 KAT6BQ8WYB5 2073 aa10.34□□□□□ -0.75
SCAMP1-206ENST00000618166 PTPN5P54829 565 aa10.33□□□□□ -0.76
SCAMP1-206ENST00000618166 NLRP2Q9NX02 1062 aa10.33□□□□□ -0.76
SCAMP1-206ENST00000618166 DOT1LQ8TEK3 1739 aa10.33□□□□□ -0.76
SCAMP1-206ENST00000618166 ANKRD36BQ8N2N9 1353 aa10.33□□□□□ -0.76
SCAMP1-206ENST00000618166 C5P01031 1676 aa10.33□□□□□ -0.76
SCAMP1-206ENST00000618166 PDE4DIPQ5VU43 2346 aa10.32□□□□□ -0.76
SCAMP1-206ENST00000618166 LOC105371045A0A1W2PR82 267 aa10.32□□□□□ -0.76
SCAMP1-206ENST00000618166 VEGFAP15692 232 aaPredicted RBP10.32□□□□□ -0.76
SCAMP1-206ENST00000618166 POTECB2RU33 542 aa10.31□□□□□ -0.76
SCAMP1-206ENST00000618166 FLAD1Q8NFF5 587 aa10.31□□□□□ -0.76
SCAMP1-206ENST00000618166 VPS9D1Q9Y2B5 631 aa10.31□□□□□ -0.76
SCAMP1-206ENST00000618166 MMP10P09238 476 aa10.3□□□□□ -0.76
SCAMP1-206ENST00000618166 KCNA3P22001 575 aa10.3□□□□□ -0.76
SCAMP1-206ENST00000618166 PRPF38BQ5VTL8 546 aaKnown RBP10.3□□□□□ -0.76
SCAMP1-206ENST00000618166 KIF13BQ9NQT8 1826 aa10.29□□□□□ -0.76
SCAMP1-206ENST00000618166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.29□□□□□ -0.76
SCAMP1-206ENST00000618166 PPP1R37O75864 691 aa10.29□□□□□ -0.76
SCAMP1-206ENST00000618166 TGFB2P61812 414 aa10.29□□□□□ -0.76
SCAMP1-206ENST00000618166 FOXK1P85037 733 aa10.29□□□□□ -0.76
SCAMP1-206ENST00000618166 RASSF7Q02833 373 aa10.29□□□□□ -0.76
SCAMP1-206ENST00000618166 KCNK17Q96T54 332 aa10.29□□□□□ -0.76
SCAMP1-206ENST00000618166 USP47Q96K76 1375 aa10.28□□□□□ -0.76
SCAMP1-206ENST00000618166 C4BP0C0L5 1744 aa10.28□□□□□ -0.76
SCAMP1-206ENST00000618166 NFAT5O94916 1531 aa10.28□□□□□ -0.76
SCAMP1-206ENST00000618166 BRCA1P38398 1863 aaKnown RBP10.28□□□□□ -0.76
SCAMP1-206ENST00000618166 VIRMAQ69YN4 1812 aaKnown RBP10.27□□□□□ -0.76
SCAMP1-206ENST00000618166 GLTPD2A6NH11 291 aa10.27□□□□□ -0.76
SCAMP1-206ENST00000618166 DCAF5Q96JK2 942 aa10.27□□□□□ -0.76
SCAMP1-206ENST00000618166 AK7Q96M32 723 aa10.27□□□□□ -0.76
SCAMP1-206ENST00000618166 MCOLN1Q9GZU1 580 aa10.27□□□□□ -0.76
SCAMP1-206ENST00000618166 TSKSQ9UJT2 592 aa10.27□□□□□ -0.76
SCAMP1-206ENST00000618166 TBC1D12O60347 775 aa10.26□□□□□ -0.77
SCAMP1-206ENST00000618166 PLPP6Q8IY26 295 aa10.26□□□□□ -0.77
SCAMP1-206ENST00000618166 SLC4A5Q9BY07 1137 aa10.26□□□□□ -0.77
SCAMP1-206ENST00000618166 SOX10P56693 466 aa10.26□□□□□ -0.77
SCAMP1-206ENST00000618166 THSD4Q6ZMP0 1018 aa10.26□□□□□ -0.77
SCAMP1-206ENST00000618166 TAF1LQ8IZX4 1826 aa10.26□□□□□ -0.77
SCAMP1-206ENST00000618166 UBR3Q6ZT12 1888 aa10.25□□□□□ -0.77
SCAMP1-206ENST00000618166 ARFGEF1Q9Y6D6 1849 aa10.25□□□□□ -0.77
SCAMP1-206ENST00000618166 PALLDQ8WX93 1383 aa10.24□□□□□ -0.77
SCAMP1-206ENST00000618166 SBF1O95248 1867 aa10.24□□□□□ -0.77
SCAMP1-206ENST00000618166 BHMG1C9JSJ3 638 aaPredicted RBP10.24□□□□□ -0.77
SCAMP1-206ENST00000618166 ANKRD24Q8TF21 1146 aa10.24□□□□□ -0.77
SCAMP1-206ENST00000618166 PASKQ96RG2 1323 aa10.23□□□□□ -0.77
SCAMP1-206ENST00000618166 KDM6AO15550 1401 aaPredicted RBP10.23□□□□□ -0.77
SCAMP1-206ENST00000618166 DALRD3Q5D0E6 543 aaKnown RBP10.23□□□□□ -0.77
SCAMP1-206ENST00000618166 KCNH5Q8NCM2 988 aa10.23□□□□□ -0.77
SCAMP1-206ENST00000618166 GPHNQ9NQX3 736 aaPredicted RBP10.23□□□□□ -0.77
SCAMP1-206ENST00000618166 CABP1Q9NZU7 370 aa10.23□□□□□ -0.77
SCAMP1-206ENST00000618166 SSFA2P28290 1259 aa10.22□□□□□ -0.77
SCAMP1-206ENST00000618166 PIM2Q9P1W9 311 aa10.22□□□□□ -0.77
SCAMP1-206ENST00000618166 WDR33Q9C0J8 1336 aaKnown RBP10.22□□□□□ -0.77
SCAMP1-206ENST00000618166 TMEM88BA6NKF7 163 aa10.21□□□□□ -0.78
SCAMP1-206ENST00000618166 CHRNA5P30532 468 aa10.21□□□□□ -0.78
SCAMP1-206ENST00000618166 SRPK2P78362 688 aaKnown RBP10.21□□□□□ -0.78
SCAMP1-206ENST00000618166 MAP2K1Q02750 393 aaPredicted RBP10.21□□□□□ -0.78
SCAMP1-206ENST00000618166 LINC00116Q8NCU8 138 aa10.21□□□□□ -0.78
SCAMP1-206ENST00000618166 TIAM2Q8IVF5 1701 aa10.21□□□□□ -0.78
SCAMP1-206ENST00000618166 DLL1O00548 723 aa10.2□□□□□ -0.78
SCAMP1-206ENST00000618166 BCL2L12Q9HB09 334 aa10.2□□□□□ -0.78
SCAMP1-206ENST00000618166 ZC3H4Q9UPT8 1303 aaKnown RBP10.2□□□□□ -0.78
SCAMP1-206ENST00000618166 LTBP1Q14766 1721 aa10.19□□□□□ -0.78
SCAMP1-206ENST00000618166 RASSF10A6NK89 507 aa10.19□□□□□ -0.78
SCAMP1-206ENST00000618166 GNPATO15228 680 aa10.19□□□□□ -0.78
SCAMP1-206ENST00000618166 DGKZQ13574 1117 aa10.19□□□□□ -0.78
SCAMP1-206ENST00000618166 DSG2Q14126 1118 aa10.19□□□□□ -0.78
SCAMP1-206ENST00000618166 HABP4Q5JVS0 413 aaKnown RBP10.19□□□□□ -0.78
SCAMP1-206ENST00000618166 CCDC87Q9NVE4 849 aa10.19□□□□□ -0.78
SCAMP1-206ENST00000618166 TTC21BQ7Z4L5 1316 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms