RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 PLEKHA4Q9H4M7 779 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 TERF2IPQ9NYB0 399 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 ZMYM4Q5VZL5 1548 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 EBAG9O00559 213 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 HMMRO75330 724 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 NUCB1Q02818 461 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 EXOSC9Q06265 439 aaKnown RBP8.64□□□□□ -1.03
PDE6A-205ENST00000617647 HDAC1Q13547 482 aaPredicted RBP8.64□□□□□ -1.03
PDE6A-205ENST00000617647 RUNDC1Q96C34 613 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 RAD50Q92878 1312 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 CT47B1P0C2W7 299 aaPredicted RBP8.64□□□□□ -1.03
PDE6A-205ENST00000617647 DDIT3P35638 169 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 NAP1L1P55209 391 aaKnown RBP8.64□□□□□ -1.03
PDE6A-205ENST00000617647 GRIPAP1Q4V328 841 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 RNF187Q5TA31 235 aaPredicted RBP8.64□□□□□ -1.03
PDE6A-205ENST00000617647 ANKRD18AQ8IVF6 992 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 RBM6P78332 1123 aaKnown RBP8.64□□□□□ -1.03
PDE6A-205ENST00000617647 TTC19Q6DKK2 380 aaPredicted RBP8.64□□□□□ -1.03
PDE6A-205ENST00000617647 EFCAB13Q8IY85 973 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 N4BP2L2Q92802 583 aaPredicted RBP8.64□□□□□ -1.03
PDE6A-205ENST00000617647 KCNF1Q9H3M0 494 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 ELL2O00472 640 aaPredicted RBP8.63□□□□□ -1.03
PDE6A-205ENST00000617647 NBPF20Q3BBV1 942 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 CLEC17AQ6ZS10 378 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 PACS2Q86VP3 889 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 ZNF513Q8N8E2 541 aaPredicted RBP8.63□□□□□ -1.03
PDE6A-205ENST00000617647 TSPY4P0CV99 314 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 TSPY10P0CW01 314 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 TYRO3Q06418 890 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 CARD6Q9BX69 1037 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 LRRCC1Q9C099 1032 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 NAT10Q9H0A0 1025 aaKnown RBP8.63□□□□□ -1.03
PDE6A-205ENST00000617647 MED4Q9NPJ6 270 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 SPATS2LQ9NUQ6 558 aaKnown RBP8.63□□□□□ -1.03
PDE6A-205ENST00000617647 ZMYM3Q14202 1370 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 INPP5BP32019 993 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 EXOC4Q96A65 974 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 ADAM21Q9UKJ8 722 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.63□□□□□ -1.03
PDE6A-205ENST00000617647 IFT140Q96RY7 1462 aa8.63□□□□□ -1.03
PDE6A-205ENST00000617647 ANKRD30BQ9BXX2 1392 aa8.62□□□□□ -1.03
PDE6A-205ENST00000617647 ECM2O94769 699 aaPredicted RBP8.62□□□□□ -1.03
PDE6A-205ENST00000617647 EIF5P55010 431 aaKnown RBP8.62□□□□□ -1.03
PDE6A-205ENST00000617647 KRT85P78386 507 aa8.62□□□□□ -1.03
PDE6A-205ENST00000617647 PDILTQ8N807 584 aa8.62□□□□□ -1.03
PDE6A-205ENST00000617647 STK31Q9BXU1 1019 aa8.62□□□□□ -1.03
PDE6A-205ENST00000617647 NUCKS1Q9H1E3 243 aaKnown RBP8.62□□□□□ -1.03
PDE6A-205ENST00000617647 EZRP15311 586 aaKnown RBP8.62□□□□□ -1.03
PDE6A-205ENST00000617647 ZNF75DP51815 510 aa8.62□□□□□ -1.03
PDE6A-205ENST00000617647 RABEP2Q9H5N1 569 aa8.62□□□□□ -1.03
PDE6A-205ENST00000617647 A0A087WUV0 522 aaPredicted RBP8.62□□□□□ -1.03
PDE6A-205ENST00000617647 NEDD9Q14511 834 aa8.62□□□□□ -1.03
PDE6A-205ENST00000617647 SLFNL1Q499Z3 407 aa8.62□□□□□ -1.03
PDE6A-205ENST00000617647 FERMT3Q86UX7 667 aa8.62□□□□□ -1.03
PDE6A-205ENST00000617647 KIF1BPQ96EK5 621 aa8.62□□□□□ -1.03
PDE6A-205ENST00000617647 RUFY1Q96T51 708 aa8.62□□□□□ -1.03
PDE6A-205ENST00000617647 MYO6Q9UM54 1294 aa8.62□□□□□ -1.03
PDE6A-205ENST00000617647 BLMP54132 1417 aaPredicted RBP8.61□□□□□ -1.03
PDE6A-205ENST00000617647 TRIM27P14373 513 aa8.61□□□□□ -1.03
PDE6A-205ENST00000617647 SCP2P22307 547 aa8.61□□□□□ -1.03
PDE6A-205ENST00000617647 MEX3CQ5U5Q3 659 aaKnown RBP8.61□□□□□ -1.03
PDE6A-205ENST00000617647 KIAA1328Q86T90 577 aa8.61□□□□□ -1.03
PDE6A-205ENST00000617647 TADA2BQ86TJ2 420 aa8.61□□□□□ -1.03
PDE6A-205ENST00000617647 DNAJC25Q9H1X3 360 aa8.61□□□□□ -1.03
PDE6A-205ENST00000617647 NUP155O75694 1391 aa8.61□□□□□ -1.03
PDE6A-205ENST00000617647 RPRD2Q5VT52 1461 aaKnown RBP8.61□□□□□ -1.03
PDE6A-205ENST00000617647 GSDMDP57764 484 aa8.61□□□□□ -1.03
PDE6A-205ENST00000617647 TRDNQ13061 729 aa8.61□□□□□ -1.03
PDE6A-205ENST00000617647 RBBP5Q15291 538 aaKnown RBP8.61□□□□□ -1.03
PDE6A-205ENST00000617647 CCDC30Q5VVM6 783 aa8.61□□□□□ -1.03
PDE6A-205ENST00000617647 OTUD6BQ8N6M0 293 aa8.61□□□□□ -1.03
PDE6A-205ENST00000617647 DAPK1P53355 1430 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 SRGAP3O43295 1099 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 VASPP50552 380 aaPredicted RBP8.6□□□□□ -1.03
PDE6A-205ENST00000617647 NBPF6Q5VWK0 638 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 NAIF1Q69YI7 327 aaPredicted RBP8.6□□□□□ -1.03
PDE6A-205ENST00000617647 CCDC73Q6ZRK6 1079 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 NBPF5PQ86XG9 351 aaPredicted RBP8.6□□□□□ -1.03
PDE6A-205ENST00000617647 CACTINQ8WUQ7 758 aaKnown RBP8.6□□□□□ -1.03
PDE6A-205ENST00000617647 NBPF4Q96M43 638 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 SCLT1Q96NL6 688 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 TRIM6Q9C030 488 aaPredicted RBP8.6□□□□□ -1.03
PDE6A-205ENST00000617647 NLRP1Q9C000 1473 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 CROCC2H7BZ55 1655 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 KIAA0556O60303 1618 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 CWC27Q6UX04 472 aaKnown RBP8.6□□□□□ -1.03
PDE6A-205ENST00000617647 TMC6Q7Z403 805 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 LARP6Q9BRS8 491 aaKnown RBP8.6□□□□□ -1.03
PDE6A-205ENST00000617647 ODF2LQ9ULJ1 636 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 H3BQV1 296 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 GNG11P61952 73 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 ATP2B2Q01814 1243 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 CEBPZQ03701 1054 aaKnown RBP8.6□□□□□ -1.03
PDE6A-205ENST00000617647 IFFO2Q5TF58 517 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 GBP3Q9H0R5 595 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 CAPN7Q9Y6W3 813 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 KIAA0586Q9BVV6 1533 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 SPATA31E1Q6ZUB1 1445 aa8.6□□□□□ -1.03
PDE6A-205ENST00000617647 RAPGEF6Q8TEU7 1601 aa8.59□□□□□ -1.03
PDE6A-205ENST00000617647 BRD1O95696 1058 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms