RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 USP44Q9H0E7 712 aa14.07□□□□□ -0.16
PCDHGA9-202ENST00000616887 BABAM1Q9NWV8 329 aa14.07□□□□□ -0.16
PCDHGA9-202ENST00000616887 LMO7Q8WWI1 1683 aa14.07□□□□□ -0.16
PCDHGA9-202ENST00000616887 CSB-PGBD3P0DP91 1061 aa14.07□□□□□ -0.16
PCDHGA9-202ENST00000616887 MCM4P33991 863 aa14.07□□□□□ -0.16
PCDHGA9-202ENST00000616887 HSPA1LP34931 641 aa14.07□□□□□ -0.16
PCDHGA9-202ENST00000616887 TRIM44Q96DX7 344 aaPredicted RBP14.07□□□□□ -0.16
PCDHGA9-202ENST00000616887 MEGF6O75095 1541 aa14.07□□□□□ -0.16
PCDHGA9-202ENST00000616887 SOS2Q07890 1332 aaPredicted RBP14.07□□□□□ -0.16
PCDHGA9-202ENST00000616887 SPATA31A3Q5VYP0 1347 aa14.07□□□□□ -0.16
PCDHGA9-202ENST00000616887 KIAA1211Q6ZU35 1233 aa14.06□□□□□ -0.16
PCDHGA9-202ENST00000616887 PI4KAP2A4QPH2 592 aa14.06□□□□□ -0.16
PCDHGA9-202ENST00000616887 PI4KAP1Q8N8J0 262 aa14.06□□□□□ -0.16
PCDHGA9-202ENST00000616887 GRPEL1Q9HAV7 217 aa14.06□□□□□ -0.16
PCDHGA9-202ENST00000616887 KDM3BQ7LBC6 1761 aa14.06□□□□□ -0.16
PCDHGA9-202ENST00000616887 COL16A1Q07092 1604 aaPredicted RBP14.06□□□□□ -0.16
PCDHGA9-202ENST00000616887 TTC22Q5TAA0 569 aa14.05□□□□□ -0.16
PCDHGA9-202ENST00000616887 TRAK2O60296 914 aa14.05□□□□□ -0.16
PCDHGA9-202ENST00000616887 NBPF7P0C2Y1 421 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA9-202ENST00000616887 PDIA4P13667 645 aaKnown RBP14.05□□□□□ -0.16
PCDHGA9-202ENST00000616887 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
PCDHGA9-202ENST00000616887 ABCC6O95255 1503 aa14.05□□□□□ -0.16
PCDHGA9-202ENST00000616887 CAMTA1Q9Y6Y1 1673 aa14.04□□□□□ -0.16
PCDHGA9-202ENST00000616887 KDM6AO15550 1401 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA9-202ENST00000616887 TULP1O00294 542 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA9-202ENST00000616887 GIGYF1O75420 1035 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA9-202ENST00000616887 ADCY9O60503 1353 aa14.03□□□□□ -0.16
PCDHGA9-202ENST00000616887 HMMRO75330 724 aa14.03□□□□□ -0.16
PCDHGA9-202ENST00000616887 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
PCDHGA9-202ENST00000616887 GNAI3P08754 354 aa14.02□□□□□ -0.16
PCDHGA9-202ENST00000616887 UBTFL1P0CB47 393 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA9-202ENST00000616887 SDSP20132 328 aa14.02□□□□□ -0.16
PCDHGA9-202ENST00000616887 PIP4K2AP48426 406 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA9-202ENST00000616887 KIF2CQ99661 725 aa14.02□□□□□ -0.16
PCDHGA9-202ENST00000616887 CDC45O75419 566 aa14.02□□□□□ -0.17
PCDHGA9-202ENST00000616887 NFATC2IPQ8NCF5 419 aa14.02□□□□□ -0.17
PCDHGA9-202ENST00000616887 SRCIN1Q9C0H9 1055 aa14.02□□□□□ -0.17
PCDHGA9-202ENST00000616887 SOS1Q07889 1333 aaPredicted RBP14.02□□□□□ -0.17
PCDHGA9-202ENST00000616887 CD2BP2O95400 341 aaKnown RBP14.01□□□□□ -0.17
PCDHGA9-202ENST00000616887 PHKG2P15735 406 aa14.01□□□□□ -0.17
PCDHGA9-202ENST00000616887 RBM25P49756 843 aaKnown RBP14.01□□□□□ -0.17
PCDHGA9-202ENST00000616887 BEND3Q5T5X7 828 aa14.01□□□□□ -0.17
PCDHGA9-202ENST00000616887 DNAAF4Q8WXU2 420 aa14.01□□□□□ -0.17
PCDHGA9-202ENST00000616887 CYP27B1O15528 508 aa14.01□□□□□ -0.17
PCDHGA9-202ENST00000616887 TATP17735 454 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA9-202ENST00000616887 ATP8B2P98198 1209 aa14□□□□□ -0.17
PCDHGA9-202ENST00000616887 AIMP1Q12904 312 aaKnown RBP14□□□□□ -0.17
PCDHGA9-202ENST00000616887 CWF19L2Q2TBE0 894 aaKnown RBP14□□□□□ -0.17
PCDHGA9-202ENST00000616887 IL1RAPL2Q9NP60 686 aa14□□□□□ -0.17
PCDHGA9-202ENST00000616887 COL18A1P39060 1754 aa14□□□□□ -0.17
PCDHGA9-202ENST00000616887 CPDO75976 1380 aa14□□□□□ -0.17
PCDHGA9-202ENST00000616887 HOXB7P09629 217 aa14□□□□□ -0.17
PCDHGA9-202ENST00000616887 ILDR1Q86SU0 546 aaPredicted RBP14□□□□□ -0.17
PCDHGA9-202ENST00000616887 MAP3K2Q9Y2U5 619 aa14□□□□□ -0.17
PCDHGA9-202ENST00000616887 PXDNLA1KZ92 1463 aa14□□□□□ -0.17
PCDHGA9-202ENST00000616887 HEG1Q9ULI3 1381 aa13.99□□□□□ -0.17
PCDHGA9-202ENST00000616887 PPP1R42Q7Z4L9 355 aa13.99□□□□□ -0.17
PCDHGA9-202ENST00000616887 FAM13BQ9NYF5 915 aa13.99□□□□□ -0.17
PCDHGA9-202ENST00000616887 DBF4Q9UBU7 674 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA9-202ENST00000616887 CRYBG1Q9Y4K1 1723 aa13.99□□□□□ -0.17
PCDHGA9-202ENST00000616887 PDE1AP54750 535 aa13.99□□□□□ -0.17
PCDHGA9-202ENST00000616887 ZNF790Q6PG37 636 aa13.99□□□□□ -0.17
PCDHGA9-202ENST00000616887 SLC52A2Q9HAB3 445 aa13.99□□□□□ -0.17
PCDHGA9-202ENST00000616887 LRRCC1Q9C099 1032 aa13.98□□□□□ -0.17
PCDHGA9-202ENST00000616887 IBTKQ9P2D0 1353 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA9-202ENST00000616887 MYL6BP14649 208 aa13.98□□□□□ -0.17
PCDHGA9-202ENST00000616887 ZNF496Q96IT1 587 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA9-202ENST00000616887 ARID3AQ99856 593 aa13.98□□□□□ -0.17
PCDHGA9-202ENST00000616887 PRDM11Q9NQV5 511 aa13.98□□□□□ -0.17
PCDHGA9-202ENST00000616887 PDIA6Q15084 440 aa13.97□□□□□ -0.17
PCDHGA9-202ENST00000616887 JCADQ9P266 1359 aa13.97□□□□□ -0.17
PCDHGA9-202ENST00000616887 SALL3Q9BXA9 1300 aa13.97□□□□□ -0.17
PCDHGA9-202ENST00000616887 OVOS2A0A0G2JMS6 1433 aa13.97□□□□□ -0.17
PCDHGA9-202ENST00000616887 SRGAP3O43295 1099 aa13.97□□□□□ -0.17
PCDHGA9-202ENST00000616887 PLEKHG2Q9H7P9 1386 aa13.97□□□□□ -0.17
PCDHGA9-202ENST00000616887 NUTM1Q86Y26 1132 aa13.96□□□□□ -0.17
PCDHGA9-202ENST00000616887 SPG7Q9UQ90 795 aa13.96□□□□□ -0.17
PCDHGA9-202ENST00000616887 SIPA1L3O60292 1781 aaPredicted RBP13.96□□□□□ -0.17
PCDHGA9-202ENST00000616887 CACNA1FO60840 1977 aa13.96□□□□□ -0.17
PCDHGA9-202ENST00000616887 SURF6O75683 361 aaKnown RBP13.96□□□□□ -0.17
PCDHGA9-202ENST00000616887 IFNL2Q8IZJ0 200 aa13.96□□□□□ -0.17
PCDHGA9-202ENST00000616887 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
PCDHGA9-202ENST00000616887 UNC5CLQ8IV45 518 aa13.95□□□□□ -0.18
PCDHGA9-202ENST00000616887 HSCBQ8IWL3 235 aa13.95□□□□□ -0.18
PCDHGA9-202ENST00000616887 SSH3Q8TE77 659 aa13.95□□□□□ -0.18
PCDHGA9-202ENST00000616887 ZHX1Q9UKY1 873 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA9-202ENST00000616887 MX1P20591 662 aa13.95□□□□□ -0.18
PCDHGA9-202ENST00000616887 USP16Q9Y5T5 823 aa13.95□□□□□ -0.18
PCDHGA9-202ENST00000616887 N4BP2Q86UW6 1770 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA9-202ENST00000616887 ADAMTS7Q9UKP4 1686 aa13.95□□□□□ -0.18
PCDHGA9-202ENST00000616887 TOM1L2Q6ZVM7 507 aa13.94□□□□□ -0.18
PCDHGA9-202ENST00000616887 GAS2L3Q86XJ1 694 aa13.94□□□□□ -0.18
PCDHGA9-202ENST00000616887 STRN4Q9NRL3 753 aa13.94□□□□□ -0.18
PCDHGA9-202ENST00000616887 COL22A1Q8NFW1 1626 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA9-202ENST00000616887 MAP4K4O95819 1239 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA9-202ENST00000616887 C5P01031 1676 aa13.94□□□□□ -0.18
PCDHGA9-202ENST00000616887 OFD1O75665 1012 aa13.93□□□□□ -0.18
PCDHGA9-202ENST00000616887 KSR2Q6VAB6 950 aa13.93□□□□□ -0.18
PCDHGA9-202ENST00000616887 CHMP5Q9NZZ3 219 aa13.93□□□□□ -0.18
PCDHGA9-202ENST00000616887 PA2G4Q9UQ80 394 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms