RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 KCNH5Q8NCM2 988 aa16.97■□□□□ 0.31
CACNA1C-231ENST00000616390 CHAMP1Q96JM3 812 aa16.97■□□□□ 0.31
CACNA1C-231ENST00000616390 ESYT1Q9BSJ8 1104 aa16.97■□□□□ 0.31
CACNA1C-231ENST00000616390 IBTKQ9P2D0 1353 aaPredicted RBP16.96■□□□□ 0.31
CACNA1C-231ENST00000616390 CDK11BP21127 795 aaKnown RBP16.96■□□□□ 0.31
CACNA1C-231ENST00000616390 PLEKHO1Q53GL0 409 aaPredicted RBP16.96■□□□□ 0.31
CACNA1C-231ENST00000616390 CACNA1FO60840 1977 aa16.96■□□□□ 0.31
CACNA1C-231ENST00000616390 BAG4O95429 457 aaKnown RBP16.96■□□□□ 0.3
CACNA1C-231ENST00000616390 OS9Q13438 667 aaPredicted RBP16.96■□□□□ 0.3
CACNA1C-231ENST00000616390 ANKRD24Q8TF21 1146 aa16.96■□□□□ 0.3
CACNA1C-231ENST00000616390 DNAAF4Q8WXU2 420 aa16.96■□□□□ 0.3
CACNA1C-231ENST00000616390 PALD1Q9ULE6 856 aa16.96■□□□□ 0.3
CACNA1C-231ENST00000616390 AXIN2Q9Y2T1 843 aa16.96■□□□□ 0.3
CACNA1C-231ENST00000616390 CHD2O14647 1828 aaKnown RBP16.95■□□□□ 0.3
CACNA1C-231ENST00000616390 FSD2A1L4K1 749 aa16.95■□□□□ 0.3
CACNA1C-231ENST00000616390 GOLGA6L22H0YM25 854 aa16.95■□□□□ 0.3
CACNA1C-231ENST00000616390 AIMP1Q12904 312 aaKnown RBP16.95■□□□□ 0.3
CACNA1C-231ENST00000616390 DDX49Q9Y6V7 483 aaKnown RBP16.95■□□□□ 0.3
CACNA1C-231ENST00000616390 DDX17Q92841 729 aaKnown RBP16.95■□□□□ 0.3
CACNA1C-231ENST00000616390 BCCIPQ9P287 314 aaKnown RBP eCLIP16.95■□□□□ 0.3
CACNA1C-231ENST00000616390 LRRC37A3O60309 1634 aa16.94■□□□□ 0.3
CACNA1C-231ENST00000616390 CHMLP26374 656 aa16.94■□□□□ 0.3
CACNA1C-231ENST00000616390 PROSER3Q2NL68 480 aa16.94■□□□□ 0.3
CACNA1C-231ENST00000616390 AKAP4Q5JQC9 854 aa16.94■□□□□ 0.3
CACNA1C-231ENST00000616390 GAS2L3Q86XJ1 694 aa16.94■□□□□ 0.3
CACNA1C-231ENST00000616390 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
CACNA1C-231ENST00000616390 SOS1Q07889 1333 aaPredicted RBP16.94■□□□□ 0.3
CACNA1C-231ENST00000616390 SALL3Q9BXA9 1300 aa16.94■□□□□ 0.3
CACNA1C-231ENST00000616390 IL25Q9H293 177 aa16.93■□□□□ 0.3
CACNA1C-231ENST00000616390 GRPEL1Q9HAV7 217 aa16.93■□□□□ 0.3
CACNA1C-231ENST00000616390 PROSER2Q86WR7 435 aaPredicted RBP16.93■□□□□ 0.3
CACNA1C-231ENST00000616390 CEMIPQ8WUJ3 1361 aa16.93■□□□□ 0.3
CACNA1C-231ENST00000616390 RNMTO43148 476 aaKnown RBP16.92■□□□□ 0.3
CACNA1C-231ENST00000616390 RHPN1Q8TCX5 695 aa16.92■□□□□ 0.3
CACNA1C-231ENST00000616390 SSH3Q8TE77 659 aa16.92■□□□□ 0.3
CACNA1C-231ENST00000616390 BABAM1Q9NWV8 329 aa16.92■□□□□ 0.3
CACNA1C-231ENST00000616390 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
CACNA1C-231ENST00000616390 CWF19L2Q2TBE0 894 aaKnown RBP16.92■□□□□ 0.3
CACNA1C-231ENST00000616390 FOXD4L6Q3SYB3 417 aaPredicted RBP16.92■□□□□ 0.3
CACNA1C-231ENST00000616390 BEND3Q5T5X7 828 aa16.92■□□□□ 0.3
CACNA1C-231ENST00000616390 FOXD4L3Q6VB84 417 aaPredicted RBP16.92■□□□□ 0.3
CACNA1C-231ENST00000616390 MAP3K2Q9Y2U5 619 aa16.92■□□□□ 0.3
CACNA1C-231ENST00000616390 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.92■□□□□ 0.3
CACNA1C-231ENST00000616390 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
CACNA1C-231ENST00000616390 HSP90B1P14625 803 aaKnown RBP16.91■□□□□ 0.3
CACNA1C-231ENST00000616390 SLC39A6Q13433 755 aa16.91■□□□□ 0.3
CACNA1C-231ENST00000616390 ARHGEF25Q86VW2 580 aa16.91■□□□□ 0.3
CACNA1C-231ENST00000616390 MRE11P49959 708 aa16.91■□□□□ 0.3
CACNA1C-231ENST00000616390 MCCP23508 829 aa16.9■□□□□ 0.3
CACNA1C-231ENST00000616390 NUCB2P80303 420 aa16.9■□□□□ 0.3
CACNA1C-231ENST00000616390 SKOR2Q2VWA4 1001 aaPredicted RBP16.9■□□□□ 0.3
CACNA1C-231ENST00000616390 PA2G4Q9UQ80 394 aaKnown RBP16.9■□□□□ 0.3
CACNA1C-231ENST00000616390 NFAT5O94916 1531 aa16.9■□□□□ 0.3
CACNA1C-231ENST00000616390 TMX3Q96JJ7 454 aa16.9■□□□□ 0.3
CACNA1C-231ENST00000616390 LARP6Q9BRS8 491 aaKnown RBP16.9■□□□□ 0.3
CACNA1C-231ENST00000616390 ADGRL3Q9HAR2 1447 aa16.9■□□□□ 0.3
CACNA1C-231ENST00000616390 NLRP2Q9NX02 1062 aa16.89■□□□□ 0.29
CACNA1C-231ENST00000616390 PXDNQ92626 1479 aa16.89■□□□□ 0.29
CACNA1C-231ENST00000616390 PRPF40AO75400 957 aaKnown RBP16.89■□□□□ 0.29
CACNA1C-231ENST00000616390 RRAGDQ9NQL2 400 aaPredicted RBP16.89■□□□□ 0.29
CACNA1C-231ENST00000616390 DBF4Q9UBU7 674 aaPredicted RBP16.89■□□□□ 0.29
CACNA1C-231ENST00000616390 MYL6BP14649 208 aa16.88■□□□□ 0.29
CACNA1C-231ENST00000616390 AMOTQ4VCS5 1084 aa16.88■□□□□ 0.29
CACNA1C-231ENST00000616390 PIP4K2AP48426 406 aaPredicted RBP16.88■□□□□ 0.29
CACNA1C-231ENST00000616390 CWC27Q6UX04 472 aaKnown RBP16.88■□□□□ 0.29
CACNA1C-231ENST00000616390 FAM43AQ8N2R8 423 aa16.88■□□□□ 0.29
CACNA1C-231ENST00000616390 CABLES1Q8TDN4 633 aa16.88■□□□□ 0.29
CACNA1C-231ENST00000616390 IPO4Q8TEX9 1081 aaKnown RBP16.88■□□□□ 0.29
CACNA1C-231ENST00000616390 KIF1BPQ96EK5 621 aa16.88■□□□□ 0.29
CACNA1C-231ENST00000616390 STAP2Q9UGK3 403 aa16.88■□□□□ 0.29
CACNA1C-231ENST00000616390 ADCY9O60503 1353 aa16.88■□□□□ 0.29
CACNA1C-231ENST00000616390 GIGYF1O75420 1035 aaPredicted RBP16.88■□□□□ 0.29
CACNA1C-231ENST00000616390 CAVIN1Q6NZI2 390 aaKnown RBP16.88■□□□□ 0.29
CACNA1C-231ENST00000616390 POLA2Q14181 598 aa16.87■□□□□ 0.29
CACNA1C-231ENST00000616390 DTNBO60941 627 aa16.87■□□□□ 0.29
CACNA1C-231ENST00000616390 RAB11FIP3O75154 756 aa16.87■□□□□ 0.29
CACNA1C-231ENST00000616390 ZDHHC9Q9Y397 364 aa16.87■□□□□ 0.29
CACNA1C-231ENST00000616390 CWC22Q9HCG8 908 aaKnown RBP16.86■□□□□ 0.29
CACNA1C-231ENST00000616390 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
CACNA1C-231ENST00000616390 ZFP91Q96JP5 570 aaPredicted RBP16.86■□□□□ 0.29
CACNA1C-231ENST00000616390 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
CACNA1C-231ENST00000616390 PI4K2BQ8TCG2 481 aa16.85■□□□□ 0.29
CACNA1C-231ENST00000616390 BBXQ8WY36 941 aaPredicted RBP16.85■□□□□ 0.29
CACNA1C-231ENST00000616390 JARID2Q92833 1246 aaPredicted RBP16.85■□□□□ 0.29
CACNA1C-231ENST00000616390 NPHP4O75161 1426 aaPredicted RBP16.85■□□□□ 0.29
CACNA1C-231ENST00000616390 SIL1Q9H173 461 aa16.85■□□□□ 0.29
CACNA1C-231ENST00000616390 RGPD5Q99666 1765 aa16.84■□□□□ 0.29
CACNA1C-231ENST00000616390 PTMSP20962 102 aa16.84■□□□□ 0.29
CACNA1C-231ENST00000616390 CHRNA2Q15822 529 aa16.84■□□□□ 0.29
CACNA1C-231ENST00000616390 RAPGEF4Q8WZA2 1011 aa16.84■□□□□ 0.29
CACNA1C-231ENST00000616390 RBM27Q9P2N5 1060 aaKnown RBP16.84■□□□□ 0.29
CACNA1C-231ENST00000616390 PXDNLA1KZ92 1463 aa16.84■□□□□ 0.29
CACNA1C-231ENST00000616390 CYP2E1P05181 493 aaPredicted RBP16.83■□□□□ 0.29
CACNA1C-231ENST00000616390 HOXB7P09629 217 aa16.83■□□□□ 0.29
CACNA1C-231ENST00000616390 KSR2Q6VAB6 950 aa16.83■□□□□ 0.29
CACNA1C-231ENST00000616390 NFATC2IPQ8NCF5 419 aa16.83■□□□□ 0.29
CACNA1C-231ENST00000616390 LMBRD1Q9NUN5 540 aa16.83■□□□□ 0.29
CACNA1C-231ENST00000616390 KLHL40Q2TBA0 621 aa16.83■□□□□ 0.28
CACNA1C-231ENST00000616390 CNTROBQ8N137 903 aa16.83■□□□□ 0.28
CACNA1C-231ENST00000616390 USP54Q70EL1 1684 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms